RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
CTNND1-229ENST00000531014 KIAA1549Q9HCM3 1950 aa4.89□□□□□ -1.63
CTNND1-229ENST00000531014 PHF5AQ7RTV0 110 aaKnown RBP4.89□□□□□ -1.63
CTNND1-229ENST00000531014 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
CTNND1-229ENST00000531014 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
CTNND1-229ENST00000531014 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
CTNND1-229ENST00000531014 DSCR10P59022 87 aa4.87□□□□□ -1.63
CTNND1-229ENST00000531014 POLQO75417 2590 aa4.87□□□□□ -1.63
CTNND1-229ENST00000531014 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
CTNND1-229ENST00000531014 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
CTNND1-229ENST00000531014 USP9XQ93008 2570 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-229ENST00000531014 C9orf163Q8N9P6 203 aa4.85□□□□□ -1.63
CTNND1-229ENST00000531014 LCE6AA0A183 80 aa4.85□□□□□ -1.63
CTNND1-229ENST00000531014 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
CTNND1-229ENST00000531014 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
CTNND1-229ENST00000531014 SPINK7P58062 85 aa4.84□□□□□ -1.63
CTNND1-229ENST00000531014 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
CTNND1-229ENST00000531014 Q75L30 129 aa4.84□□□□□ -1.64
CTNND1-229ENST00000531014 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
CTNND1-229ENST00000531014 PCNX3Q9H6A9 2034 aa4.83□□□□□ -1.64
CTNND1-229ENST00000531014 A0A1B0GU33 70 aa4.83□□□□□ -1.64
CTNND1-229ENST00000531014 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
CTNND1-229ENST00000531014 OBSCN-AS1Q96MR7 158 aa4.83□□□□□ -1.64
CTNND1-229ENST00000531014 GVQW2A0A096LPI5 108 aaPredicted RBP4.82□□□□□ -1.64
CTNND1-229ENST00000531014 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
CTNND1-229ENST00000531014 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
CTNND1-229ENST00000531014 RTL8CO15255 209 aa4.81□□□□□ -1.64
CTNND1-229ENST00000531014 LINC00315P59091 139 aa4.81□□□□□ -1.64
CTNND1-229ENST00000531014 FN1P02751 2386 aaKnown RBP4.81□□□□□ -1.64
CTNND1-229ENST00000531014 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
CTNND1-229ENST00000531014 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
CTNND1-229ENST00000531014 H3BNG1 76 aa4.8□□□□□ -1.64
CTNND1-229ENST00000531014 Q8N1X5 172 aa4.8□□□□□ -1.64
CTNND1-229ENST00000531014 USP9YO00507 2555 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-229ENST00000531014 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
CTNND1-229ENST00000531014 LITAFQ99732 161 aa4.79□□□□□ -1.64
CTNND1-229ENST00000531014 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
CTNND1-229ENST00000531014 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
CTNND1-229ENST00000531014 LINC00304Q8N9R0 145 aa4.78□□□□□ -1.64
CTNND1-229ENST00000531014 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
CTNND1-229ENST00000531014 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
CTNND1-229ENST00000531014 RAI1Q7Z5J4 1906 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-229ENST00000531014 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
CTNND1-229ENST00000531014 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
CTNND1-229ENST00000531014 KRTAP10-11P60412 298 aa4.76□□□□□ -1.65
CTNND1-229ENST00000531014 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
CTNND1-229ENST00000531014 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
CTNND1-229ENST00000531014 Q8N377 158 aa4.74□□□□□ -1.65
CTNND1-229ENST00000531014 EXPH5Q8NEV8 1989 aa4.74□□□□□ -1.65
CTNND1-229ENST00000531014 IGLV7-46A0A075B6I9 117 aa4.74□□□□□ -1.65
CTNND1-229ENST00000531014 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
CTNND1-229ENST00000531014 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
CTNND1-229ENST00000531014 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
CTNND1-229ENST00000531014 ACANP16112 2415 aa4.72□□□□□ -1.65
CTNND1-229ENST00000531014 ZNF861PO60384 105 aa4.72□□□□□ -1.65
CTNND1-229ENST00000531014 Q5XG85 94 aa4.71□□□□□ -1.66
CTNND1-229ENST00000531014 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
CTNND1-229ENST00000531014 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
CTNND1-229ENST00000531014 HRES1P13985 223 aa4.69□□□□□ -1.66
CTNND1-229ENST00000531014 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
CTNND1-229ENST00000531014 ROMO1P60602 79 aa4.68□□□□□ -1.66
CTNND1-229ENST00000531014 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
CTNND1-229ENST00000531014 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
CTNND1-229ENST00000531014 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
CTNND1-229ENST00000531014 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
CTNND1-229ENST00000531014 Q5VV11 94 aa4.67□□□□□ -1.66
CTNND1-229ENST00000531014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
CTNND1-229ENST00000531014 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
CTNND1-229ENST00000531014 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
CTNND1-229ENST00000531014 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-229ENST00000531014 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
CTNND1-229ENST00000531014 ZNF292O60281 2723 aa4.65□□□□□ -1.67
CTNND1-229ENST00000531014 SETXQ7Z333 2677 aaKnown RBP4.64□□□□□ -1.67
CTNND1-229ENST00000531014 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
CTNND1-229ENST00000531014 EIF4EBP3O60516 100 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-229ENST00000531014 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
CTNND1-229ENST00000531014 FAM229BQ4G0N7 80 aa4.64□□□□□ -1.67
CTNND1-229ENST00000531014 Q6ZSA8 131 aa4.64□□□□□ -1.67
CTNND1-229ENST00000531014 CFAP46Q8IYW2 2715 aa4.63□□□□□ -1.67
CTNND1-229ENST00000531014 TNP2Q05952 138 aa4.63□□□□□ -1.67
CTNND1-229ENST00000531014 SPRR4Q96PI1 79 aa4.63□□□□□ -1.67
CTNND1-229ENST00000531014 Q8NAQ8 132 aa4.62□□□□□ -1.67
CTNND1-229ENST00000531014 CEP350Q5VT06 3117 aa4.61□□□□□ -1.67
CTNND1-229ENST00000531014 PRR34Q9NV39 138 aa4.61□□□□□ -1.67
CTNND1-229ENST00000531014 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
CTNND1-229ENST00000531014 R4GN34 69 aa4.61□□□□□ -1.67
CTNND1-229ENST00000531014 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
CTNND1-229ENST00000531014 COL27A1Q8IZC6 1860 aaPredicted RBP4.6□□□□□ -1.67
CTNND1-229ENST00000531014 MAST4O15021 2626 aa4.6□□□□□ -1.67
CTNND1-229ENST00000531014 UNC79Q9P2D8 2635 aa4.59□□□□□ -1.67
CTNND1-229ENST00000531014 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.68
CTNND1-229ENST00000531014 S4R3F8 94 aa4.58□□□□□ -1.68
CTNND1-229ENST00000531014 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
CTNND1-229ENST00000531014 M0R2T5 61 aa4.58□□□□□ -1.68
CTNND1-229ENST00000531014 IGSF10Q6WRI0 2623 aa4.55□□□□□ -1.68
CTNND1-229ENST00000531014 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CTNND1-229ENST00000531014 A0A087WTM6 91 aa4.55□□□□□ -1.68
CTNND1-229ENST00000531014 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
CTNND1-229ENST00000531014 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
CTNND1-229ENST00000531014 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms