RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
CTNND1-227ENST00000530748 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 KLKP1Q107X0 134 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 PIEZO2Q9H5I5 2752 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
CTNND1-227ENST00000530748 CD164Q04900 197 aa5.46□□□□□ -1.54
CTNND1-227ENST00000530748 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
CTNND1-227ENST00000530748 C2CD3Q4AC94 2353 aa5.46□□□□□ -1.54
CTNND1-227ENST00000530748 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
CTNND1-227ENST00000530748 EP400Q96L91 3159 aa5.45□□□□□ -1.54
CTNND1-227ENST00000530748 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
CTNND1-227ENST00000530748 IGF2RP11717 2491 aa5.44□□□□□ -1.54
CTNND1-227ENST00000530748 Q6ZSA8 131 aa5.43□□□□□ -1.54
CTNND1-227ENST00000530748 NCOR2Q9Y618 2525 aa5.42□□□□□ -1.54
CTNND1-227ENST00000530748 A0A1W2PNM2 257 aa5.42□□□□□ -1.54
CTNND1-227ENST00000530748 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
CTNND1-227ENST00000530748 MUC4Q99102 2169 aa5.42□□□□□ -1.54
CTNND1-227ENST00000530748 WIPF1O43516 503 aa5.41□□□□□ -1.54
CTNND1-227ENST00000530748 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
CTNND1-227ENST00000530748 H7BZZ5 65 aa5.41□□□□□ -1.54
CTNND1-227ENST00000530748 IGLV5-48A0A075B6I7 105 aa5.39□□□□□ -1.55
CTNND1-227ENST00000530748 WDR87Q6ZQQ6 2873 aa5.39□□□□□ -1.55
CTNND1-227ENST00000530748 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
CTNND1-227ENST00000530748 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
CTNND1-227ENST00000530748 LCA10Q71F78 164 aa5.37□□□□□ -1.55
CTNND1-227ENST00000530748 LRRK2Q5S007 2527 aa5.37□□□□□ -1.55
CTNND1-227ENST00000530748 ZNF462Q96JM2 2506 aa5.36□□□□□ -1.55
CTNND1-227ENST00000530748 Q8N1X5 172 aa5.35□□□□□ -1.55
CTNND1-227ENST00000530748 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
CTNND1-227ENST00000530748 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.56
CTNND1-227ENST00000530748 BPTFQ12830 3046 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
CTNND1-227ENST00000530748 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 TNP2Q05952 138 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 TLN1Q9Y490 2541 aaKnown RBP5.33□□□□□ -1.56
CTNND1-227ENST00000530748 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 MYO9AB2RTY4 2548 aa5.33□□□□□ -1.56
CTNND1-227ENST00000530748 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
CTNND1-227ENST00000530748 A0A0D9SG42 100 aa5.32□□□□□ -1.56
CTNND1-227ENST00000530748 CHD8Q9HCK8 2581 aa5.31□□□□□ -1.56
CTNND1-227ENST00000530748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-227ENST00000530748 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
CTNND1-227ENST00000530748 PRR26Q8N8Z3 221 aa5.3□□□□□ -1.56
CTNND1-227ENST00000530748 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
CTNND1-227ENST00000530748 HRES1P13985 223 aa5.29□□□□□ -1.56
CTNND1-227ENST00000530748 ZFYVE26Q68DK2 2539 aa5.29□□□□□ -1.56
CTNND1-227ENST00000530748 Q1T7F1 81 aa5.29□□□□□ -1.56
CTNND1-227ENST00000530748 PLAC8Q9NZF1 115 aa5.29□□□□□ -1.56
CTNND1-227ENST00000530748 CENPFP49454 3210 aa5.28□□□□□ -1.56
CTNND1-227ENST00000530748 F8P00451 2351 aa5.28□□□□□ -1.56
CTNND1-227ENST00000530748 GOLGB1Q14789 3259 aaKnown RBP5.26□□□□□ -1.57
CTNND1-227ENST00000530748 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
CTNND1-227ENST00000530748 ABCA12Q86UK0 2595 aa5.24□□□□□ -1.57
CTNND1-227ENST00000530748 H3BS24 57 aa5.24□□□□□ -1.57
CTNND1-227ENST00000530748 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
CTNND1-227ENST00000530748 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
CTNND1-227ENST00000530748 Q5XG85 94 aa5.23□□□□□ -1.57
CTNND1-227ENST00000530748 S4R3F8 94 aa5.23□□□□□ -1.57
CTNND1-227ENST00000530748 TLN2Q9Y4G6 2542 aa5.22□□□□□ -1.57
CTNND1-227ENST00000530748 SPRR1AP35321 89 aa5.22□□□□□ -1.57
CTNND1-227ENST00000530748 USP9XQ93008 2570 aaPredicted RBP5.22□□□□□ -1.57
CTNND1-227ENST00000530748 Q75L30 129 aa5.22□□□□□ -1.57
CTNND1-227ENST00000530748 A0A1B0GU33 70 aa5.21□□□□□ -1.58
CTNND1-227ENST00000530748 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
CTNND1-227ENST00000530748 CEP295Q9C0D2 2601 aa5.2□□□□□ -1.58
CTNND1-227ENST00000530748 Q8NDZ9 215 aa5.19□□□□□ -1.58
CTNND1-227ENST00000530748 SETD2Q9BYW2 2564 aaPredicted RBP5.19□□□□□ -1.58
CTNND1-227ENST00000530748 ANKRD11Q6UB99 2663 aaPredicted RBP5.19□□□□□ -1.58
CTNND1-227ENST00000530748 SPRR1BP22528 89 aa5.18□□□□□ -1.58
CTNND1-227ENST00000530748 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
CTNND1-227ENST00000530748 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
CTNND1-227ENST00000530748 CYSTM1Q9H1C7 97 aa5.16□□□□□ -1.58
CTNND1-227ENST00000530748 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
CTNND1-227ENST00000530748 Q5W150 140 aa5.16□□□□□ -1.58
CTNND1-227ENST00000530748 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
CTNND1-227ENST00000530748 USP9YO00507 2555 aaPredicted RBP5.15□□□□□ -1.58
CTNND1-227ENST00000530748 OXTP01178 125 aa5.15□□□□□ -1.59
CTNND1-227ENST00000530748 LINC00472Q9H8W2 130 aa5.14□□□□□ -1.59
CTNND1-227ENST00000530748 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-227ENST00000530748 Q5VSD8 79 aa5.14□□□□□ -1.59
CTNND1-227ENST00000530748 MTORP42345 2549 aa5.13□□□□□ -1.59
CTNND1-227ENST00000530748 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
CTNND1-227ENST00000530748 PKD1L2Q7Z442 2459 aa5.12□□□□□ -1.59
CTNND1-227ENST00000530748 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
CTNND1-227ENST00000530748 CR1P17927 2039 aa5.11□□□□□ -1.59
CTNND1-227ENST00000530748 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
CTNND1-227ENST00000530748 LCE6AA0A183 80 aa5.1□□□□□ -1.59
CTNND1-227ENST00000530748 POLQO75417 2590 aa5.09□□□□□ -1.59
CTNND1-227ENST00000530748 SPTBN4Q9H254 2564 aa5.08□□□□□ -1.6
CTNND1-227ENST00000530748 SPINK7P58062 85 aa5.08□□□□□ -1.6
CTNND1-227ENST00000530748 KRTAP10-1P60331 282 aa5.08□□□□□ -1.6
CTNND1-227ENST00000530748 FASNP49327 2511 aaKnown RBP5.08□□□□□ -1.6
CTNND1-227ENST00000530748 R4GN34 69 aa5.07□□□□□ -1.6
CTNND1-227ENST00000530748 DNAH12Q6ZR08 3092 aa5.07□□□□□ -1.6
CTNND1-227ENST00000530748 ANKRD17O75179 2603 aaKnown RBP5.06□□□□□ -1.6
CTNND1-227ENST00000530748 Q5VV11 94 aa5.06□□□□□ -1.6
CTNND1-227ENST00000530748 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms