RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-208ENST00000529994 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
SF3B2-208ENST00000529994 SPRR1AP35321 89 aa6.45□□□□□ -1.38
SF3B2-208ENST00000529994 ADAMTSL4-AS1Q5T5F5 129 aa6.45□□□□□ -1.38
SF3B2-208ENST00000529994 TTTY13Q9BZ97 58 aa6.45□□□□□ -1.38
SF3B2-208ENST00000529994 TRBV10-2A0A0K0K1G8 114 aa6.44□□□□□ -1.38
SF3B2-208ENST00000529994 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
SF3B2-208ENST00000529994 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 B5MCH6 92 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-208ENST00000529994 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
SF3B2-208ENST00000529994 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
SF3B2-208ENST00000529994 NDUFC2O95298 119 aa6.42□□□□□ -1.38
SF3B2-208ENST00000529994 ATOH7Q8N100 152 aa6.42□□□□□ -1.38
SF3B2-208ENST00000529994 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
SF3B2-208ENST00000529994 C20orf202A1L168 122 aa6.41□□□□□ -1.38
SF3B2-208ENST00000529994 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
SF3B2-208ENST00000529994 LINC00308Q8TCZ7 52 aa6.41□□□□□ -1.38
SF3B2-208ENST00000529994 IGLV9-49A0A0B4J1Y8 123 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 IGLV6-57P01721 117 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 C4orf48Q5BLP8 95 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
SF3B2-208ENST00000529994 Q6ZRX8 168 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 Q8NBF4 154 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 LITAFQ99732 161 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 Q9BRP9 147 aa6.4□□□□□ -1.38
SF3B2-208ENST00000529994 ZNF73O43830 326 aaPredicted RBP6.39□□□□□ -1.39
SF3B2-208ENST00000529994 CTAG1AP78358 180 aa6.39□□□□□ -1.39
SF3B2-208ENST00000529994 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
SF3B2-208ENST00000529994 TIMM17BO60830 172 aa6.38□□□□□ -1.39
SF3B2-208ENST00000529994 MOBPQ13875 183 aa6.38□□□□□ -1.39
SF3B2-208ENST00000529994 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
SF3B2-208ENST00000529994 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
SF3B2-208ENST00000529994 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
SF3B2-208ENST00000529994 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
SF3B2-208ENST00000529994 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
SF3B2-208ENST00000529994 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
SF3B2-208ENST00000529994 HINT1P49773 126 aaPredicted RBP6.36□□□□□ -1.39
SF3B2-208ENST00000529994 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
SF3B2-208ENST00000529994 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
SF3B2-208ENST00000529994 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
SF3B2-208ENST00000529994 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
SF3B2-208ENST00000529994 S100A2P29034 98 aa6.34□□□□□ -1.39
SF3B2-208ENST00000529994 PCP2Q8IVA1 136 aa6.34□□□□□ -1.39
SF3B2-208ENST00000529994 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.39
SF3B2-208ENST00000529994 CBY1Q9Y3M2 126 aa6.34□□□□□ -1.39
SF3B2-208ENST00000529994 C6orf99Q4VX62 202 aa6.32□□□□□ -1.4
SF3B2-208ENST00000529994 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
SF3B2-208ENST00000529994 A6NDN8 102 aa6.31□□□□□ -1.4
SF3B2-208ENST00000529994 S100A1P23297 94 aa6.31□□□□□ -1.4
SF3B2-208ENST00000529994 COX7BP24311 80 aa6.31□□□□□ -1.4
SF3B2-208ENST00000529994 LINC00518Q8N0U6 118 aa6.31□□□□□ -1.4
SF3B2-208ENST00000529994 SPINK1P00995 79 aa6.3□□□□□ -1.4
SF3B2-208ENST00000529994 S100A6P06703 90 aa6.3□□□□□ -1.4
SF3B2-208ENST00000529994 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
SF3B2-208ENST00000529994 HIST1H2BLQ99880 126 aa6.3□□□□□ -1.4
SF3B2-208ENST00000529994 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 AKR1D1P51857 326 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 MT1HP80294 61 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
SF3B2-208ENST00000529994 IFITM1P13164 125 aa6.28□□□□□ -1.4
SF3B2-208ENST00000529994 ELOF1P60002 83 aaKnown RBP6.28□□□□□ -1.4
SF3B2-208ENST00000529994 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
SF3B2-208ENST00000529994 HRCT1Q6UXD1 115 aa6.28□□□□□ -1.4
SF3B2-208ENST00000529994 TAL2Q16559 108 aa6.27□□□□□ -1.41
SF3B2-208ENST00000529994 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
SF3B2-208ENST00000529994 Q1RN00 199 aa6.26□□□□□ -1.41
SF3B2-208ENST00000529994 XP32Q5T750 250 aa6.26□□□□□ -1.41
SF3B2-208ENST00000529994 Q6ZVH6 145 aa6.26□□□□□ -1.41
SF3B2-208ENST00000529994 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
SF3B2-208ENST00000529994 CFC1BP0CG36 223 aa6.25□□□□□ -1.41
SF3B2-208ENST00000529994 SLC25A34Q6PIV7 304 aa6.25□□□□□ -1.41
SF3B2-208ENST00000529994 Q8N377 158 aa6.25□□□□□ -1.41
SF3B2-208ENST00000529994 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
SF3B2-208ENST00000529994 C5orf52A6NGY3 159 aa6.24□□□□□ -1.41
SF3B2-208ENST00000529994 TRAV13-2A0A0B4J235 113 aa6.23□□□□□ -1.41
SF3B2-208ENST00000529994 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
SF3B2-208ENST00000529994 SLC25A20O43772 301 aa6.23□□□□□ -1.41
SF3B2-208ENST00000529994 SPRR1BP22528 89 aa6.23□□□□□ -1.41
SF3B2-208ENST00000529994 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
SF3B2-208ENST00000529994 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
SF3B2-208ENST00000529994 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SF3B2-208ENST00000529994 SMIM11BQ8TCY0 68 aa6.22□□□□□ -1.41
SF3B2-208ENST00000529994 C12orf57Q99622 126 aa6.22□□□□□ -1.41
SF3B2-208ENST00000529994 TRBV7-6A0A0J9YX20 115 aa6.21□□□□□ -1.42
SF3B2-208ENST00000529994 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
SF3B2-208ENST00000529994 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
SF3B2-208ENST00000529994 A4D1N5 150 aa6.2□□□□□ -1.42
SF3B2-208ENST00000529994 PCOTHQ58A44 107 aa6.2□□□□□ -1.42
SF3B2-208ENST00000529994 H7C2G1 150 aa6.19□□□□□ -1.42
SF3B2-208ENST00000529994 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
SF3B2-208ENST00000529994 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
SF3B2-208ENST00000529994 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
SF3B2-208ENST00000529994 M0R2T5 61 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms