RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SMR3BP02814 79 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-220ENST00000529526 C8orf17Q9NRJ1 99 aa5.31□□□□□ -1.56
CTNND1-220ENST00000529526 CEP295Q9C0D2 2601 aa5.31□□□□□ -1.56
CTNND1-220ENST00000529526 DNAH12Q6ZR08 3092 aa5.31□□□□□ -1.56
CTNND1-220ENST00000529526 LINC01600Q96MT4 127 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 SETD2Q9BYW2 2564 aaPredicted RBP5.3□□□□□ -1.56
CTNND1-220ENST00000529526 A0A087WTM6 91 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 CEP350Q5VT06 3117 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 ZNF861PO60384 105 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 APLNQ9ULZ1 77 aa5.3□□□□□ -1.56
CTNND1-220ENST00000529526 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
CTNND1-220ENST00000529526 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
CTNND1-220ENST00000529526 LINC00612Q8N6U2 182 aa5.28□□□□□ -1.56
CTNND1-220ENST00000529526 ANKRD17O75179 2603 aaKnown RBP5.28□□□□□ -1.56
CTNND1-220ENST00000529526 ERC2-IT1O76042 136 aa5.28□□□□□ -1.56
CTNND1-220ENST00000529526 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
CTNND1-220ENST00000529526 CD164Q04900 197 aa5.27□□□□□ -1.57
CTNND1-220ENST00000529526 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
CTNND1-220ENST00000529526 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
CTNND1-220ENST00000529526 USP9YO00507 2555 aaPredicted RBP5.26□□□□□ -1.57
CTNND1-220ENST00000529526 CHD8Q9HCK8 2581 aa5.26□□□□□ -1.57
CTNND1-220ENST00000529526 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
CTNND1-220ENST00000529526 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
CTNND1-220ENST00000529526 C9orf163Q8N9P6 203 aa5.25□□□□□ -1.57
CTNND1-220ENST00000529526 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
CTNND1-220ENST00000529526 POLQO75417 2590 aa5.25□□□□□ -1.57
CTNND1-220ENST00000529526 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
CTNND1-220ENST00000529526 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
CTNND1-220ENST00000529526 PKD1L2Q7Z442 2459 aa5.24□□□□□ -1.57
CTNND1-220ENST00000529526 UQCR11O14957 56 aa5.23□□□□□ -1.57
CTNND1-220ENST00000529526 SPTBN4Q9H254 2564 aa5.23□□□□□ -1.57
CTNND1-220ENST00000529526 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 A0A1W2PNM2 257 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 KLKP1Q107X0 134 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 SPRR4Q96PI1 79 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 HTTP42858 3142 aa5.22□□□□□ -1.57
CTNND1-220ENST00000529526 KRTAP1-1Q07627 177 aa5.21□□□□□ -1.57
CTNND1-220ENST00000529526 LCA10Q71F78 164 aa5.21□□□□□ -1.57
CTNND1-220ENST00000529526 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.57
CTNND1-220ENST00000529526 H7BZZ5 65 aa5.21□□□□□ -1.58
CTNND1-220ENST00000529526 MTORP42345 2549 aa5.21□□□□□ -1.58
CTNND1-220ENST00000529526 Q8N1X5 172 aa5.2□□□□□ -1.58
CTNND1-220ENST00000529526 ACANP16112 2415 aa5.2□□□□□ -1.58
CTNND1-220ENST00000529526 ZNF575Q86XF7 245 aa5.19□□□□□ -1.58
CTNND1-220ENST00000529526 CNBPP62633 177 aaKnown RBP5.19□□□□□ -1.58
CTNND1-220ENST00000529526 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
CTNND1-220ENST00000529526 H3BS24 57 aa5.18□□□□□ -1.58
CTNND1-220ENST00000529526 A0A0D9SG42 100 aa5.17□□□□□ -1.58
CTNND1-220ENST00000529526 IGLV5-48A0A075B6I7 105 aa5.17□□□□□ -1.58
CTNND1-220ENST00000529526 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
CTNND1-220ENST00000529526 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
CTNND1-220ENST00000529526 TNP2Q05952 138 aa5.14□□□□□ -1.59
CTNND1-220ENST00000529526 WIPF1O43516 503 aa5.14□□□□□ -1.59
CTNND1-220ENST00000529526 FASNP49327 2511 aaKnown RBP5.14□□□□□ -1.59
CTNND1-220ENST00000529526 FAM104AQ969W3 186 aa5.13□□□□□ -1.59
CTNND1-220ENST00000529526 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
CTNND1-220ENST00000529526 C5orf42Q9H799 3197 aa5.12□□□□□ -1.59
CTNND1-220ENST00000529526 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
CTNND1-220ENST00000529526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
CTNND1-220ENST00000529526 LAMA2P24043 3122 aaKnown RBP5.11□□□□□ -1.59
CTNND1-220ENST00000529526 SPANXA2-OT1Q8N9U9 137 aa5.1□□□□□ -1.59
CTNND1-220ENST00000529526 CHD7Q9P2D1 2997 aa5.09□□□□□ -1.59
CTNND1-220ENST00000529526 F8P00451 2351 aa5.09□□□□□ -1.59
CTNND1-220ENST00000529526 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.6
CTNND1-220ENST00000529526 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
CTNND1-220ENST00000529526 BRCA2P51587 3418 aa5.07□□□□□ -1.6
CTNND1-220ENST00000529526 CHD9Q3L8U1 2897 aa5.07□□□□□ -1.6
CTNND1-220ENST00000529526 Q8NDZ9 215 aa5.06□□□□□ -1.6
CTNND1-220ENST00000529526 RANBP2P49792 3224 aaKnown RBP5.05□□□□□ -1.6
CTNND1-220ENST00000529526 MKI67P46013 3256 aaKnown RBP5.04□□□□□ -1.6
CTNND1-220ENST00000529526 Q6ZSA8 131 aa5.04□□□□□ -1.6
CTNND1-220ENST00000529526 CR1P17927 2039 aa5.04□□□□□ -1.6
CTNND1-220ENST00000529526 HRES1P13985 223 aa5.03□□□□□ -1.6
CTNND1-220ENST00000529526 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
CTNND1-220ENST00000529526 EPG5Q9HCE0 2579 aa5.03□□□□□ -1.6
CTNND1-220ENST00000529526 PRRC2CQ9Y520 2896 aaKnown RBP5.03□□□□□ -1.6
CTNND1-220ENST00000529526 TRANK1O15050 2925 aa5.03□□□□□ -1.6
CTNND1-220ENST00000529526 LINC00483Q53H64 154 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 Q1T7F1 81 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 LAMA3Q16787 3333 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 BPTFQ12830 3046 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 FAM229BQ4G0N7 80 aa5.01□□□□□ -1.61
CTNND1-220ENST00000529526 MMP24-AS1A0A0U1RRL7 71 aa5□□□□□ -1.61
CTNND1-220ENST00000529526 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-220ENST00000529526 PLAC8Q9NZF1 115 aa4.99□□□□□ -1.61
CTNND1-220ENST00000529526 HECTD1Q9ULT8 2610 aa4.98□□□□□ -1.61
CTNND1-220ENST00000529526 A0A1B0GU33 70 aa4.98□□□□□ -1.61
CTNND1-220ENST00000529526 CYSTM1Q9H1C7 97 aa4.97□□□□□ -1.61
CTNND1-220ENST00000529526 ZCCHC13Q8WW36 166 aaKnown RBP4.96□□□□□ -1.61
CTNND1-220ENST00000529526 FLNBO75369 2602 aaKnown RBP4.96□□□□□ -1.62
CTNND1-220ENST00000529526 SPRR1AP35321 89 aa4.96□□□□□ -1.62
CTNND1-220ENST00000529526 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
CTNND1-220ENST00000529526 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
CTNND1-220ENST00000529526 M0R2T5 61 aa4.95□□□□□ -1.62
CTNND1-220ENST00000529526 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
CTNND1-220ENST00000529526 Q75L30 129 aa4.94□□□□□ -1.62
CTNND1-220ENST00000529526 S4R3F8 94 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms