RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
CLNS1A-210ENST00000528364 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CLNS1A-210ENST00000528364 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
CLNS1A-210ENST00000528364 HERVK_113P61574 105 aa8.61□□□□□ -1.03
CLNS1A-210ENST00000528364 RPS29P62273 56 aaKnown RBP8.61□□□□□ -1.03
CLNS1A-210ENST00000528364 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
CLNS1A-210ENST00000528364 HSPB8Q9UJY1 196 aa8.61□□□□□ -1.03
CLNS1A-210ENST00000528364 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
CLNS1A-210ENST00000528364 ZNF73O43830 326 aaPredicted RBP8.6□□□□□ -1.03
CLNS1A-210ENST00000528364 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-210ENST00000528364 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-210ENST00000528364 XP32Q5T750 250 aa8.57□□□□□ -1.04
CLNS1A-210ENST00000528364 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
CLNS1A-210ENST00000528364 COLCA2A8K830 154 aa8.55□□□□□ -1.04
CLNS1A-210ENST00000528364 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
CLNS1A-210ENST00000528364 E9PLD3 99 aa8.54□□□□□ -1.04
CLNS1A-210ENST00000528364 LITAFQ99732 161 aa8.54□□□□□ -1.04
CLNS1A-210ENST00000528364 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
CLNS1A-210ENST00000528364 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
CLNS1A-210ENST00000528364 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
CLNS1A-210ENST00000528364 HINT1P49773 126 aaPredicted RBP8.51□□□□□ -1.05
CLNS1A-210ENST00000528364 SPRR1BP22528 89 aa8.5□□□□□ -1.05
CLNS1A-210ENST00000528364 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
CLNS1A-210ENST00000528364 C5orf52A6NGY3 159 aa8.49□□□□□ -1.05
CLNS1A-210ENST00000528364 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
CLNS1A-210ENST00000528364 S100A1P23297 94 aa8.49□□□□□ -1.05
CLNS1A-210ENST00000528364 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
CLNS1A-210ENST00000528364 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
CLNS1A-210ENST00000528364 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-210ENST00000528364 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
CLNS1A-210ENST00000528364 PCOTHQ58A44 107 aa8.47□□□□□ -1.05
CLNS1A-210ENST00000528364 DHRS4-AS1Q9P1J3 65 aa8.47□□□□□ -1.05
CLNS1A-210ENST00000528364 TIMM17BO60830 172 aa8.46□□□□□ -1.06
CLNS1A-210ENST00000528364 DEFB105AQ8NG35 78 aa8.46□□□□□ -1.06
CLNS1A-210ENST00000528364 LAMTOR3Q9UHA4 124 aa8.46□□□□□ -1.06
CLNS1A-210ENST00000528364 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
CLNS1A-210ENST00000528364 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
CLNS1A-210ENST00000528364 COX7BP24311 80 aa8.45□□□□□ -1.06
CLNS1A-210ENST00000528364 LINC01545Q5VT33 79 aa8.45□□□□□ -1.06
CLNS1A-210ENST00000528364 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
CLNS1A-210ENST00000528364 Q1RN00 199 aa8.44□□□□□ -1.06
CLNS1A-210ENST00000528364 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
CLNS1A-210ENST00000528364 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BKO60814 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BJP06899 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BOP23527 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BBP33778 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BDP58876 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 ELOF1P60002 83 aaKnown RBP8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BCP62807 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 TAL2Q16559 108 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST2H2BEQ16778 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BHQ93079 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BNQ99877 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 HIST1H2BMQ99879 126 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
CLNS1A-210ENST00000528364 IGLV8-61A0A075B6I0 122 aa8.42□□□□□ -1.06
CLNS1A-210ENST00000528364 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
CLNS1A-210ENST00000528364 H7C2G1 150 aa8.42□□□□□ -1.06
CLNS1A-210ENST00000528364 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
CLNS1A-210ENST00000528364 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.06
CLNS1A-210ENST00000528364 SMIM29Q86T20 159 aa8.4□□□□□ -1.06
CLNS1A-210ENST00000528364 LINC00518Q8N0U6 118 aa8.4□□□□□ -1.06
CLNS1A-210ENST00000528364 C3orf79P0CE67 100 aa8.39□□□□□ -1.07
CLNS1A-210ENST00000528364 MT1HP80294 61 aa8.39□□□□□ -1.07
CLNS1A-210ENST00000528364 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
CLNS1A-210ENST00000528364 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
CLNS1A-210ENST00000528364 CD164Q04900 197 aa8.37□□□□□ -1.07
CLNS1A-210ENST00000528364 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
CLNS1A-210ENST00000528364 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
CLNS1A-210ENST00000528364 AKR1D1P51857 326 aa8.35□□□□□ -1.07
CLNS1A-210ENST00000528364 KRTDAPP60985 99 aa8.35□□□□□ -1.07
CLNS1A-210ENST00000528364 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
CLNS1A-210ENST00000528364 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
CLNS1A-210ENST00000528364 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
CLNS1A-210ENST00000528364 A6NDN8 102 aa8.33□□□□□ -1.08
CLNS1A-210ENST00000528364 MUSTN1Q8IVN3 82 aa8.33□□□□□ -1.08
CLNS1A-210ENST00000528364 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
CLNS1A-210ENST00000528364 Q5XG85 94 aa8.32□□□□□ -1.08
CLNS1A-210ENST00000528364 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
CLNS1A-210ENST00000528364 IGLV5-48A0A075B6I7 105 aa8.31□□□□□ -1.08
CLNS1A-210ENST00000528364 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
CLNS1A-210ENST00000528364 IFITM1P13164 125 aa8.3□□□□□ -1.08
CLNS1A-210ENST00000528364 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
CLNS1A-210ENST00000528364 SMIM11BQ8TCY0 68 aa8.28□□□□□ -1.08
CLNS1A-210ENST00000528364 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
CLNS1A-210ENST00000528364 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
CLNS1A-210ENST00000528364 RPL37P61927 97 aaKnown RBP8.26□□□□□ -1.09
CLNS1A-210ENST00000528364 COPS9Q8WXC6 57 aa8.26□□□□□ -1.09
CLNS1A-210ENST00000528364 CFC1BP0CG36 223 aa8.25□□□□□ -1.09
CLNS1A-210ENST00000528364 Q6ZVH6 145 aa8.25□□□□□ -1.09
CLNS1A-210ENST00000528364 C20orf202A1L168 122 aa8.24□□□□□ -1.09
CLNS1A-210ENST00000528364 A4D1N5 150 aa8.24□□□□□ -1.09
CLNS1A-210ENST00000528364 S100A6P06703 90 aa8.24□□□□□ -1.09
CLNS1A-210ENST00000528364 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
CLNS1A-210ENST00000528364 TCL1BO95988 128 aa8.21□□□□□ -1.1
CLNS1A-210ENST00000528364 NHP2Q9NX24 153 aaKnown RBP8.21□□□□□ -1.1
CLNS1A-210ENST00000528364 M0R2T5 61 aa8.2□□□□□ -1.1
CLNS1A-210ENST00000528364 S100A2P29034 98 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms