RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
CAPN1-206ENST00000526966 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
CAPN1-206ENST00000526966 TMEM223A0PJW6 202 aa10.75□□□□□ -0.69
CAPN1-206ENST00000526966 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
CAPN1-206ENST00000526966 M0R378 163 aa10.74□□□□□ -0.69
CAPN1-206ENST00000526966 SMIM13P0DJ93 91 aa10.74□□□□□ -0.69
CAPN1-206ENST00000526966 PFN2P35080 140 aa10.74□□□□□ -0.69
CAPN1-206ENST00000526966 PLEKHB2Q96CS7 222 aa10.74□□□□□ -0.69
CAPN1-206ENST00000526966 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
CAPN1-206ENST00000526966 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
CAPN1-206ENST00000526966 SND1-IT1Q9HBX3 110 aa10.73□□□□□ -0.69
CAPN1-206ENST00000526966 E9PLD3 99 aa10.72□□□□□ -0.69
CAPN1-206ENST00000526966 K7EP34 96 aa10.71□□□□□ -0.69
CAPN1-206ENST00000526966 HERVK_113P61574 105 aa10.71□□□□□ -0.69
CAPN1-206ENST00000526966 Q6ZVH6 145 aa10.71□□□□□ -0.69
CAPN1-206ENST00000526966 CEND1Q8N111 149 aa10.71□□□□□ -0.69
CAPN1-206ENST00000526966 ERG28Q9UKR5 140 aa10.71□□□□□ -0.69
CAPN1-206ENST00000526966 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
CAPN1-206ENST00000526966 Q8NDZ9 215 aa10.7□□□□□ -0.7
CAPN1-206ENST00000526966 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
CAPN1-206ENST00000526966 A0A1W2PPM0 123 aa10.69□□□□□ -0.7
CAPN1-206ENST00000526966 FABP2P12104 132 aa10.69□□□□□ -0.7
CAPN1-206ENST00000526966 COX17Q14061 63 aa10.69□□□□□ -0.7
CAPN1-206ENST00000526966 SPAG11AQ6PDA7 123 aa10.69□□□□□ -0.7
CAPN1-206ENST00000526966 A0A1B0GWB2 263 aa10.67□□□□□ -0.7
CAPN1-206ENST00000526966 K7ERU9 68 aa10.67□□□□□ -0.7
CAPN1-206ENST00000526966 LEPROTO15243 131 aa10.67□□□□□ -0.7
CAPN1-206ENST00000526966 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-206ENST00000526966 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
CAPN1-206ENST00000526966 A6NJY4 79 aa10.66□□□□□ -0.7
CAPN1-206ENST00000526966 H3BUT2 72 aa10.66□□□□□ -0.7
CAPN1-206ENST00000526966 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
CAPN1-206ENST00000526966 HIGD2AQ9BW72 106 aa10.66□□□□□ -0.7
CAPN1-206ENST00000526966 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
CAPN1-206ENST00000526966 FXYD2P54710 66 aa10.64□□□□□ -0.71
CAPN1-206ENST00000526966 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-206ENST00000526966 HIST1H4GQ99525 98 aa10.64□□□□□ -0.71
CAPN1-206ENST00000526966 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
CAPN1-206ENST00000526966 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
CAPN1-206ENST00000526966 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
CAPN1-206ENST00000526966 J3QQQ9 107 aa10.62□□□□□ -0.71
CAPN1-206ENST00000526966 TSPEAR-AS2P59090 65 aa10.61□□□□□ -0.71
CAPN1-206ENST00000526966 ASB16-AS1Q495Z4 193 aa10.61□□□□□ -0.71
CAPN1-206ENST00000526966 SPANXB1Q9NS25 103 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-206ENST00000526966 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
CAPN1-206ENST00000526966 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
CAPN1-206ENST00000526966 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-206ENST00000526966 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
CAPN1-206ENST00000526966 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
CAPN1-206ENST00000526966 LYRM7Q5U5X0 104 aa10.59□□□□□ -0.71
CAPN1-206ENST00000526966 TTTY13Q9BZ97 58 aa10.59□□□□□ -0.71
CAPN1-206ENST00000526966 HERV-K104P63124 156 aa10.58□□□□□ -0.72
CAPN1-206ENST00000526966 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
CAPN1-206ENST00000526966 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
CAPN1-206ENST00000526966 RAB37Q96AX2 223 aa10.58□□□□□ -0.72
CAPN1-206ENST00000526966 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
CAPN1-206ENST00000526966 Q8NBF4 154 aa10.57□□□□□ -0.72
CAPN1-206ENST00000526966 F8W1H4 67 aa10.56□□□□□ -0.72
CAPN1-206ENST00000526966 DAND5Q8N907 189 aa10.56□□□□□ -0.72
CAPN1-206ENST00000526966 PRYO14603 147 aa10.55□□□□□ -0.72
CAPN1-206ENST00000526966 SPRR1AP35321 89 aa10.55□□□□□ -0.72
CAPN1-206ENST00000526966 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
CAPN1-206ENST00000526966 SPINK1P00995 79 aa10.54□□□□□ -0.72
CAPN1-206ENST00000526966 LINC00158P58513 81 aa10.54□□□□□ -0.72
CAPN1-206ENST00000526966 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-206ENST00000526966 KRTAP4-16G5E9R7 235 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-206ENST00000526966 K7ERJ3 54 aa10.51□□□□□ -0.73
CAPN1-206ENST00000526966 LINC00483Q53H64 154 aa10.51□□□□□ -0.73
CAPN1-206ENST00000526966 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-206ENST00000526966 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
CAPN1-206ENST00000526966 KCNQ1DNQ9H478 68 aa10.51□□□□□ -0.73
CAPN1-206ENST00000526966 A0A0J9YXY3 114 aa10.5□□□□□ -0.73
CAPN1-206ENST00000526966 A0A0U1RRA0 63 aa10.5□□□□□ -0.73
CAPN1-206ENST00000526966 J3QR89 54 aa10.5□□□□□ -0.73
CAPN1-206ENST00000526966 SEC61BP60468 96 aaKnown RBP10.5□□□□□ -0.73
CAPN1-206ENST00000526966 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
CAPN1-206ENST00000526966 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
CAPN1-206ENST00000526966 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
CAPN1-206ENST00000526966 RPS29P62273 56 aaKnown RBP10.48□□□□□ -0.73
CAPN1-206ENST00000526966 NCR3O14931 201 aa10.47□□□□□ -0.73
CAPN1-206ENST00000526966 TIMM17BO60830 172 aa10.47□□□□□ -0.73
CAPN1-206ENST00000526966 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
CAPN1-206ENST00000526966 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.73
CAPN1-206ENST00000526966 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
CAPN1-206ENST00000526966 Q8N377 158 aa10.45□□□□□ -0.74
CAPN1-206ENST00000526966 MIR7-3HGQ8N6C7 128 aa10.45□□□□□ -0.74
CAPN1-206ENST00000526966 TRBV10-3A0A0K0K1G6 114 aa10.44□□□□□ -0.74
CAPN1-206ENST00000526966 PCP4P48539 62 aa10.44□□□□□ -0.74
CAPN1-206ENST00000526966 LITAFQ99732 161 aa10.44□□□□□ -0.74
CAPN1-206ENST00000526966 FSIP2Q5CZC0 6907 aa10.44□□□□□ -0.74
CAPN1-206ENST00000526966 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
CAPN1-206ENST00000526966 MOBPQ13875 183 aa10.43□□□□□ -0.74
CAPN1-206ENST00000526966 ADAMTSL4-AS1Q5T5F5 129 aa10.43□□□□□ -0.74
CAPN1-206ENST00000526966 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
CAPN1-206ENST00000526966 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
CAPN1-206ENST00000526966 XP32Q5T750 250 aa10.42□□□□□ -0.74
CAPN1-206ENST00000526966 SSBP3-AS1Q7Z2R9 100 aa10.42□□□□□ -0.74
CAPN1-206ENST00000526966 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
CAPN1-206ENST00000526966 B5MCH6 92 aa10.41□□□□□ -0.74
CAPN1-206ENST00000526966 SPANXDQ9BXN6 97 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms