RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CFC1P0CG37 223 aa10.12□□□□□ -0.79
CAPN1-205ENST00000526954 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
CAPN1-205ENST00000526954 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-205ENST00000526954 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
CAPN1-205ENST00000526954 SRRM2Q9UQ35 2752 aaKnown RBP10.11□□□□□ -0.79
CAPN1-205ENST00000526954 CTAG1AP78358 180 aa10.1□□□□□ -0.79
CAPN1-205ENST00000526954 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-205ENST00000526954 KRTAP13-1Q8IUC0 172 aa10.09□□□□□ -0.79
CAPN1-205ENST00000526954 H0Y9J4 135 aa10.08□□□□□ -0.8
CAPN1-205ENST00000526954 ZNF861PO60384 105 aa10.08□□□□□ -0.8
CAPN1-205ENST00000526954 BVES-AS1Q5T3Y7 98 aa10.08□□□□□ -0.8
CAPN1-205ENST00000526954 FAM19A1Q7Z5A9 133 aa10.08□□□□□ -0.8
CAPN1-205ENST00000526954 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
CAPN1-205ENST00000526954 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
CAPN1-205ENST00000526954 UBE2AP49459 152 aa10.07□□□□□ -0.8
CAPN1-205ENST00000526954 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
CAPN1-205ENST00000526954 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
CAPN1-205ENST00000526954 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
CAPN1-205ENST00000526954 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
CAPN1-205ENST00000526954 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
CAPN1-205ENST00000526954 B5MCH6 92 aa10.05□□□□□ -0.8
CAPN1-205ENST00000526954 M0R143 59 aa10.05□□□□□ -0.8
CAPN1-205ENST00000526954 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
CAPN1-205ENST00000526954 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
CAPN1-205ENST00000526954 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
CAPN1-205ENST00000526954 PKHD1L1Q86WI1 4243 aa10.04□□□□□ -0.8
CAPN1-205ENST00000526954 TRBV7-6A0A0J9YX20 115 aa10.04□□□□□ -0.8
CAPN1-205ENST00000526954 HINT1P49773 126 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-205ENST00000526954 PRLHP81277 87 aa10.04□□□□□ -0.8
CAPN1-205ENST00000526954 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
CAPN1-205ENST00000526954 Q6ZRX8 168 aa10.04□□□□□ -0.8
CAPN1-205ENST00000526954 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
CAPN1-205ENST00000526954 ELOF1P60002 83 aaKnown RBP10□□□□□ -0.81
CAPN1-205ENST00000526954 K7ERJ3 54 aa9.99□□□□□ -0.81
CAPN1-205ENST00000526954 COX7BP24311 80 aa9.99□□□□□ -0.81
CAPN1-205ENST00000526954 SMCR5Q8TEV8 140 aa9.99□□□□□ -0.81
CAPN1-205ENST00000526954 Q9BRP9 147 aa9.99□□□□□ -0.81
CAPN1-205ENST00000526954 H7C2G1 150 aa9.98□□□□□ -0.81
CAPN1-205ENST00000526954 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
CAPN1-205ENST00000526954 VAMP3Q15836 100 aa9.97□□□□□ -0.81
CAPN1-205ENST00000526954 Q1RN00 199 aa9.96□□□□□ -0.82
CAPN1-205ENST00000526954 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
CAPN1-205ENST00000526954 ABCA13Q86UQ4 5058 aa9.95□□□□□ -0.82
CAPN1-205ENST00000526954 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
CAPN1-205ENST00000526954 TSPAN13O95857 204 aa9.93□□□□□ -0.82
CAPN1-205ENST00000526954 FLG2Q5D862 2391 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-205ENST00000526954 H0YGX0 51 aa9.91□□□□□ -0.82
CAPN1-205ENST00000526954 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
CAPN1-205ENST00000526954 BATFQ16520 125 aa9.91□□□□□ -0.82
CAPN1-205ENST00000526954 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
CAPN1-205ENST00000526954 TRIAP1O43715 76 aa9.9□□□□□ -0.82
CAPN1-205ENST00000526954 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-205ENST00000526954 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
CAPN1-205ENST00000526954 SLC25A20O43772 301 aa9.88□□□□□ -0.83
CAPN1-205ENST00000526954 PSMB2P49721 201 aa9.88□□□□□ -0.83
CAPN1-205ENST00000526954 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
CAPN1-205ENST00000526954 PCP4L1A6NKN8 68 aa9.87□□□□□ -0.83
CAPN1-205ENST00000526954 OXTP01178 125 aa9.87□□□□□ -0.83
CAPN1-205ENST00000526954 COX6CP09669 75 aa9.87□□□□□ -0.83
CAPN1-205ENST00000526954 LINC01600Q96MT4 127 aa9.87□□□□□ -0.83
CAPN1-205ENST00000526954 hADV29S1A0JD25 119 aa9.86□□□□□ -0.83
CAPN1-205ENST00000526954 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
CAPN1-205ENST00000526954 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
CAPN1-205ENST00000526954 FAT3Q8TDW7 4589 aa9.85□□□□□ -0.83
CAPN1-205ENST00000526954 KRTAP29-1A8MX34 341 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-205ENST00000526954 ST20-AS1Q8NBB2 130 aa9.84□□□□□ -0.83
CAPN1-205ENST00000526954 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
CAPN1-205ENST00000526954 LRP1Q07954 4544 aaKnown RBP9.84□□□□□ -0.83
CAPN1-205ENST00000526954 A0A1B0GX51 115 aa9.83□□□□□ -0.84
CAPN1-205ENST00000526954 SNCGO76070 127 aa9.83□□□□□ -0.84
CAPN1-205ENST00000526954 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
CAPN1-205ENST00000526954 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
CAPN1-205ENST00000526954 SPRR1BP22528 89 aa9.82□□□□□ -0.84
CAPN1-205ENST00000526954 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
CAPN1-205ENST00000526954 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
CAPN1-205ENST00000526954 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
CAPN1-205ENST00000526954 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
CAPN1-205ENST00000526954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-205ENST00000526954 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
CAPN1-205ENST00000526954 CRYGAP11844 174 aa9.8□□□□□ -0.84
CAPN1-205ENST00000526954 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-205ENST00000526954 CLEC2BQ92478 149 aa9.8□□□□□ -0.84
CAPN1-205ENST00000526954 A0A087X002 238 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 Q6ZQY7 126 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
CAPN1-205ENST00000526954 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
CAPN1-205ENST00000526954 NAA38Q9BRA0 125 aaKnown RBP9.78□□□□□ -0.84
CAPN1-205ENST00000526954 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
CAPN1-205ENST00000526954 H3BUT2 72 aa9.76□□□□□ -0.85
CAPN1-205ENST00000526954 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
CAPN1-205ENST00000526954 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
CAPN1-205ENST00000526954 Q8N377 158 aa9.76□□□□□ -0.85
CAPN1-205ENST00000526954 LST1O00453 97 aa9.75□□□□□ -0.85
CAPN1-205ENST00000526954 LYRM7Q5U5X0 104 aa9.75□□□□□ -0.85
CAPN1-205ENST00000526954 PPDPFLQ8WWR9 84 aa9.75□□□□□ -0.85
CAPN1-205ENST00000526954 TRACP01848 142 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms