RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PTPN13Q12923 2485 aa6.1□□□□□ -1.43
CTNND1-213ENST00000526357 COL4A2P08572 1712 aa6.09□□□□□ -1.44
CTNND1-213ENST00000526357 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
CTNND1-213ENST00000526357 A0A1B0GU33 70 aa6.07□□□□□ -1.44
CTNND1-213ENST00000526357 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
CTNND1-213ENST00000526357 PRR26Q8N8Z3 221 aa6.07□□□□□ -1.44
CTNND1-213ENST00000526357 NAV2Q8IVL1 2488 aa6.06□□□□□ -1.44
CTNND1-213ENST00000526357 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
CTNND1-213ENST00000526357 EIF4EBP3O60516 100 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-213ENST00000526357 CUL9Q8IWT3 2517 aa6.05□□□□□ -1.44
CTNND1-213ENST00000526357 HRES1P13985 223 aa6.05□□□□□ -1.44
CTNND1-213ENST00000526357 LINC00612Q8N6U2 182 aa6.05□□□□□ -1.44
CTNND1-213ENST00000526357 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
CTNND1-213ENST00000526357 TTC28Q96AY4 2481 aa6.03□□□□□ -1.44
CTNND1-213ENST00000526357 M0R2T5 61 aa6.03□□□□□ -1.44
CTNND1-213ENST00000526357 ATRXP46100 2492 aa6.02□□□□□ -1.45
CTNND1-213ENST00000526357 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
CTNND1-213ENST00000526357 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
CTNND1-213ENST00000526357 Q75L30 129 aa6.01□□□□□ -1.45
CTNND1-213ENST00000526357 EP400Q96L91 3159 aa6.01□□□□□ -1.45
CTNND1-213ENST00000526357 GIG44P09565 113 aaPredicted RBP6□□□□□ -1.45
CTNND1-213ENST00000526357 C2CD3Q4AC94 2353 aa6□□□□□ -1.45
CTNND1-213ENST00000526357 ABCA2Q9BZC7 2435 aa5.99□□□□□ -1.45
CTNND1-213ENST00000526357 S4R3F8 94 aa5.99□□□□□ -1.45
CTNND1-213ENST00000526357 OCR1Q9BZK8 76 aa5.98□□□□□ -1.45
CTNND1-213ENST00000526357 CASC10Q5T4H9 136 aa5.97□□□□□ -1.45
CTNND1-213ENST00000526357 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
CTNND1-213ENST00000526357 CACNA1AO00555 2505 aa5.97□□□□□ -1.45
CTNND1-213ENST00000526357 KRTAP10-3P60369 221 aa5.96□□□□□ -1.46
CTNND1-213ENST00000526357 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
CTNND1-213ENST00000526357 BDP1A6H8Y1 2624 aa5.95□□□□□ -1.46
CTNND1-213ENST00000526357 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
CTNND1-213ENST00000526357 FAM229BQ4G0N7 80 aa5.93□□□□□ -1.46
CTNND1-213ENST00000526357 WIPF1O43516 503 aa5.93□□□□□ -1.46
CTNND1-213ENST00000526357 SPINK7P58062 85 aa5.9□□□□□ -1.46
CTNND1-213ENST00000526357 DOPEY1Q5JWR5 2465 aa5.9□□□□□ -1.46
CTNND1-213ENST00000526357 H3BS24 57 aa5.9□□□□□ -1.47
CTNND1-213ENST00000526357 CCDC168Q8NDH2 2452 aa5.89□□□□□ -1.47
CTNND1-213ENST00000526357 TNP2Q05952 138 aa5.88□□□□□ -1.47
CTNND1-213ENST00000526357 R4GN34 69 aa5.88□□□□□ -1.47
CTNND1-213ENST00000526357 A0A096LNT2 108 aa5.86□□□□□ -1.47
CTNND1-213ENST00000526357 MMP24-AS1A0A0U1RRL7 71 aa5.86□□□□□ -1.47
CTNND1-213ENST00000526357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-213ENST00000526357 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-213ENST00000526357 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
CTNND1-213ENST00000526357 ROMO1P60602 79 aa5.83□□□□□ -1.48
CTNND1-213ENST00000526357 MYO18BQ8IUG5 2567 aa5.83□□□□□ -1.48
CTNND1-213ENST00000526357 LRRK2Q5S007 2527 aa5.83□□□□□ -1.48
CTNND1-213ENST00000526357 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
CTNND1-213ENST00000526357 Q5W150 140 aa5.83□□□□□ -1.48
CTNND1-213ENST00000526357 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
CTNND1-213ENST00000526357 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CTNND1-213ENST00000526357 Q5VV11 94 aa5.8□□□□□ -1.48
CTNND1-213ENST00000526357 Q5XG85 94 aa5.79□□□□□ -1.48
CTNND1-213ENST00000526357 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
CTNND1-213ENST00000526357 MYO9AB2RTY4 2548 aa5.78□□□□□ -1.48
CTNND1-213ENST00000526357 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
CTNND1-213ENST00000526357 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
CTNND1-213ENST00000526357 PIEZO1Q92508 2521 aa5.77□□□□□ -1.49
CTNND1-213ENST00000526357 NCOR2Q9Y618 2525 aa5.76□□□□□ -1.49
CTNND1-213ENST00000526357 M0QZ58 72 aa5.76□□□□□ -1.49
CTNND1-213ENST00000526357 FP248Q71RG6 208 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-213ENST00000526357 SPRR1AP35321 89 aa5.73□□□□□ -1.49
CTNND1-213ENST00000526357 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
CTNND1-213ENST00000526357 IGF2RP11717 2491 aa5.73□□□□□ -1.49
CTNND1-213ENST00000526357 SPRR1BP22528 89 aa5.73□□□□□ -1.49
CTNND1-213ENST00000526357 PIEZO2Q9H5I5 2752 aa5.73□□□□□ -1.49
CTNND1-213ENST00000526357 FN1P02751 2386 aaKnown RBP5.72□□□□□ -1.49
CTNND1-213ENST00000526357 KRTAP1-3Q8IUG1 177 aa5.71□□□□□ -1.5
CTNND1-213ENST00000526357 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
CTNND1-213ENST00000526357 ABCA12Q86UK0 2595 aa5.69□□□□□ -1.5
CTNND1-213ENST00000526357 JMJD1CQ15652 2540 aa5.68□□□□□ -1.5
CTNND1-213ENST00000526357 KRTAP1-1Q07627 177 aa5.68□□□□□ -1.5
CTNND1-213ENST00000526357 F8P00451 2351 aa5.68□□□□□ -1.5
CTNND1-213ENST00000526357 Q5VSD8 79 aa5.67□□□□□ -1.5
CTNND1-213ENST00000526357 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
CTNND1-213ENST00000526357 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
CTNND1-213ENST00000526357 CR1P17927 2039 aa5.66□□□□□ -1.5
CTNND1-213ENST00000526357 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
CTNND1-213ENST00000526357 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
CTNND1-213ENST00000526357 OXTP01178 125 aa5.63□□□□□ -1.51
CTNND1-213ENST00000526357 TLN1Q9Y490 2541 aaKnown RBP5.62□□□□□ -1.51
CTNND1-213ENST00000526357 Q8NDZ9 215 aa5.62□□□□□ -1.51
CTNND1-213ENST00000526357 SRCAPQ6ZRS2 3230 aa5.61□□□□□ -1.51
CTNND1-213ENST00000526357 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
CTNND1-213ENST00000526357 Q6ZR54 194 aa5.61□□□□□ -1.51
CTNND1-213ENST00000526357 ZFYVE26Q68DK2 2539 aa5.59□□□□□ -1.52
CTNND1-213ENST00000526357 ZNF462Q96JM2 2506 aa5.58□□□□□ -1.52
CTNND1-213ENST00000526357 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
CTNND1-213ENST00000526357 PANO1I0J062 215 aa5.56□□□□□ -1.52
CTNND1-213ENST00000526357 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
CTNND1-213ENST00000526357 USP9XQ93008 2570 aaPredicted RBP5.54□□□□□ -1.52
CTNND1-213ENST00000526357 LCE6AA0A183 80 aa5.54□□□□□ -1.52
CTNND1-213ENST00000526357 TLN2Q9Y4G6 2542 aa5.54□□□□□ -1.52
CTNND1-213ENST00000526357 GOLGB1Q14789 3259 aaKnown RBP5.53□□□□□ -1.52
CTNND1-213ENST00000526357 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
CTNND1-213ENST00000526357 ANKRD17O75179 2603 aaKnown RBP5.51□□□□□ -1.53
CTNND1-213ENST00000526357 PKD1L2Q7Z442 2459 aa5.5□□□□□ -1.53
CTNND1-213ENST00000526357 ANKRD11Q6UB99 2663 aaPredicted RBP5.5□□□□□ -1.53
CTNND1-213ENST00000526357 KRTAP10-2P60368 255 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms