RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 A0A096LNT2 108 aa4.22□□□□□ -1.73
CTNND1-212ENST00000525902 C19orf73Q9NVV2 129 aa4.22□□□□□ -1.73
CTNND1-212ENST00000525902 WNK1Q9H4A3 2382 aa4.22□□□□□ -1.73
CTNND1-212ENST00000525902 LINC00483Q53H64 154 aa4.21□□□□□ -1.73
CTNND1-212ENST00000525902 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
CTNND1-212ENST00000525902 ZFHX2Q9C0A1 2572 aaPredicted RBP4.2□□□□□ -1.74
CTNND1-212ENST00000525902 C2CD3Q4AC94 2353 aa4.19□□□□□ -1.74
CTNND1-212ENST00000525902 DNAH10OSP0CZ25 163 aa4.18□□□□□ -1.74
CTNND1-212ENST00000525902 CNBPP62633 177 aaKnown RBP4.18□□□□□ -1.74
CTNND1-212ENST00000525902 LCE6AA0A183 80 aa4.17□□□□□ -1.74
CTNND1-212ENST00000525902 TNP2Q05952 138 aa4.17□□□□□ -1.74
CTNND1-212ENST00000525902 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.74
CTNND1-212ENST00000525902 A0A0D9SG42 100 aa4.15□□□□□ -1.75
CTNND1-212ENST00000525902 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.75
CTNND1-212ENST00000525902 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
CTNND1-212ENST00000525902 Q96NJ1 140 aa4.14□□□□□ -1.75
CTNND1-212ENST00000525902 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
CTNND1-212ENST00000525902 RTL8CO15255 209 aa4.13□□□□□ -1.75
CTNND1-212ENST00000525902 Q6ZR54 194 aa4.13□□□□□ -1.75
CTNND1-212ENST00000525902 ATRXP46100 2492 aa4.13□□□□□ -1.75
CTNND1-212ENST00000525902 SPACA4Q8TDM5 124 aa4.13□□□□□ -1.75
CTNND1-212ENST00000525902 TTC28Q96AY4 2481 aa4.12□□□□□ -1.75
CTNND1-212ENST00000525902 GIG44P09565 113 aaPredicted RBP4.11□□□□□ -1.75
CTNND1-212ENST00000525902 KRTAP10-9P60411 292 aa4.11□□□□□ -1.75
CTNND1-212ENST00000525902 MUC6Q6W4X9 2439 aa4.1□□□□□ -1.75
CTNND1-212ENST00000525902 CSPG4Q6UVK1 2322 aa4.1□□□□□ -1.75
CTNND1-212ENST00000525902 A8MU10 97 aa4.1□□□□□ -1.75
CTNND1-212ENST00000525902 FAM168BA1KXE4 195 aa4.1□□□□□ -1.75
CTNND1-212ENST00000525902 ZNF462Q96JM2 2506 aa4.09□□□□□ -1.76
CTNND1-212ENST00000525902 SPRR1AP35321 89 aa4.09□□□□□ -1.76
CTNND1-212ENST00000525902 SPG11Q96JI7 2443 aa4.08□□□□□ -1.76
CTNND1-212ENST00000525902 WDR87Q6ZQQ6 2873 aa4.08□□□□□ -1.76
CTNND1-212ENST00000525902 IGLV5-52A0A0A0MRZ9 124 aa4.08□□□□□ -1.76
CTNND1-212ENST00000525902 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
CTNND1-212ENST00000525902 GOLGB1Q14789 3259 aaKnown RBP4.08□□□□□ -1.76
CTNND1-212ENST00000525902 DNAH12Q6ZR08 3092 aa4.08□□□□□ -1.76
CTNND1-212ENST00000525902 Q8N1X5 172 aa4.07□□□□□ -1.76
CTNND1-212ENST00000525902 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
CTNND1-212ENST00000525902 FAM208BQ5VWN6 2430 aa4.07□□□□□ -1.76
CTNND1-212ENST00000525902 A8MUU9 505 aa4.06□□□□□ -1.76
CTNND1-212ENST00000525902 ACACBO00763 2458 aa4.06□□□□□ -1.76
CTNND1-212ENST00000525902 TLN1Q9Y490 2541 aaKnown RBP4.06□□□□□ -1.76
CTNND1-212ENST00000525902 SPRR1BP22528 89 aa4.06□□□□□ -1.76
CTNND1-212ENST00000525902 HIVEP2P31629 2446 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
CTNND1-212ENST00000525902 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 LINC00472Q9H8W2 130 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 ZNF861PO60384 105 aa4.05□□□□□ -1.76
CTNND1-212ENST00000525902 J3QL48 77 aa4.04□□□□□ -1.76
CTNND1-212ENST00000525902 PIEZO2Q9H5I5 2752 aa4.04□□□□□ -1.76
CTNND1-212ENST00000525902 Q8NDZ9 215 aa4.03□□□□□ -1.76
CTNND1-212ENST00000525902 NAV2Q8IVL1 2488 aa4.02□□□□□ -1.77
CTNND1-212ENST00000525902 Q5W150 140 aa4.02□□□□□ -1.77
CTNND1-212ENST00000525902 PANO1I0J062 215 aa4.01□□□□□ -1.77
CTNND1-212ENST00000525902 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
CTNND1-212ENST00000525902 CENPFP49454 3210 aa4□□□□□ -1.77
CTNND1-212ENST00000525902 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
CTNND1-212ENST00000525902 BDP1A6H8Y1 2624 aa3.99□□□□□ -1.77
CTNND1-212ENST00000525902 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
CTNND1-212ENST00000525902 SMR3AQ99954 134 aa3.99□□□□□ -1.77
CTNND1-212ENST00000525902 IGF2RP11717 2491 aa3.99□□□□□ -1.77
CTNND1-212ENST00000525902 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
CTNND1-212ENST00000525902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-212ENST00000525902 HIVEP3Q5T1R4 2406 aa3.98□□□□□ -1.77
CTNND1-212ENST00000525902 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
CTNND1-212ENST00000525902 CEP350Q5VT06 3117 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 KRTAP26-1Q6PEX3 210 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 SONP18583 2426 aaKnown RBP3.94□□□□□ -1.78
CTNND1-212ENST00000525902 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 KRTAP4-16G5E9R7 235 aaPredicted RBP3.94□□□□□ -1.78
CTNND1-212ENST00000525902 CHD7Q9P2D1 2997 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 CHD9Q3L8U1 2897 aa3.94□□□□□ -1.78
CTNND1-212ENST00000525902 MYO9AB2RTY4 2548 aa3.93□□□□□ -1.78
CTNND1-212ENST00000525902 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
CTNND1-212ENST00000525902 ANAPC11Q9NYG5 84 aa3.92□□□□□ -1.78
CTNND1-212ENST00000525902 CR1P17927 2039 aa3.92□□□□□ -1.78
CTNND1-212ENST00000525902 NCOR2Q9Y618 2525 aa3.91□□□□□ -1.78
CTNND1-212ENST00000525902 ANKRD11Q6UB99 2663 aaPredicted RBP3.91□□□□□ -1.78
CTNND1-212ENST00000525902 HTTP42858 3142 aa3.9□□□□□ -1.79
CTNND1-212ENST00000525902 TRANK1O15050 2925 aa3.89□□□□□ -1.79
CTNND1-212ENST00000525902 USP9XQ93008 2570 aaPredicted RBP3.89□□□□□ -1.79
CTNND1-212ENST00000525902 CEP295Q9C0D2 2601 aa3.89□□□□□ -1.79
CTNND1-212ENST00000525902 KRTAP1-3Q8IUG1 177 aa3.89□□□□□ -1.79
CTNND1-212ENST00000525902 DOPEY1Q5JWR5 2465 aa3.88□□□□□ -1.79
CTNND1-212ENST00000525902 KRTAP10-3P60369 221 aa3.88□□□□□ -1.79
CTNND1-212ENST00000525902 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
CTNND1-212ENST00000525902 CCDC168Q8NDH2 2452 aa3.87□□□□□ -1.79
CTNND1-212ENST00000525902 S4R3F8 94 aa3.86□□□□□ -1.79
CTNND1-212ENST00000525902 USP9YO00507 2555 aaPredicted RBP3.86□□□□□ -1.79
CTNND1-212ENST00000525902 A0A087WTM6 91 aa3.85□□□□□ -1.79
CTNND1-212ENST00000525902 PIEZO1Q92508 2521 aa3.84□□□□□ -1.79
CTNND1-212ENST00000525902 KRTAP1-1Q07627 177 aa3.84□□□□□ -1.79
CTNND1-212ENST00000525902 ANKRD17O75179 2603 aaKnown RBP3.84□□□□□ -1.8
CTNND1-212ENST00000525902 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CTNND1-212ENST00000525902 FN1P02751 2386 aaKnown RBP3.83□□□□□ -1.8
CTNND1-212ENST00000525902 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms