RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 C3orf79P0CE67 100 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 Q8N377 158 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 NKAPP1Q8N9T2 125 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 Q8NDZ9 215 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 TTTY13Q9BZ97 58 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 NDUFA12Q9UI09 145 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 F8WDY8 70 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 LEPROTO15243 131 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 LGALS3P17931 250 aaKnown RBP3.14□□□□□ -1.91
SVIP-202ENST00000525670 PLNP26678 52 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 HERVK_113P61574 105 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 SND1-IT1Q9HBX3 110 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 TP73-AS1Q9UF72 201 aa3.14□□□□□ -1.91
SVIP-202ENST00000525670 IGKV2D-26A0A0A0MRZ7 120 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 TMEM238C9JI98 176 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 J3QQQ9 107 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 S100A2P29034 98 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 NMUP48645 174 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 SNRPEP62304 92 aaKnown RBP3.13□□□□□ -1.91
SVIP-202ENST00000525670 MRPL55Q7Z7F7 128 aaKnown RBP3.13□□□□□ -1.91
SVIP-202ENST00000525670 MIR7-3HGQ8N6C7 128 aa3.13□□□□□ -1.91
SVIP-202ENST00000525670 MYMXA0A1B0GTQ4 84 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 S100A6P06703 90 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 VPREB1P12018 145 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 PRLHP81277 87 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 BOD1L2Q8IYS8 172 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 HIST3H2BBQ8N257 126 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 LINC00167Q96N53 147 aa3.12□□□□□ -1.91
SVIP-202ENST00000525670 C20orf202A1L168 122 aa3.11□□□□□ -1.91
SVIP-202ENST00000525670 ZNF815PA8K554 130 aa3.11□□□□□ -1.91
SVIP-202ENST00000525670 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
SVIP-202ENST00000525670 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
SVIP-202ENST00000525670 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
SVIP-202ENST00000525670 HIST1H2BLQ99880 126 aa3.11□□□□□ -1.91
SVIP-202ENST00000525670 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 E9PLD3 99 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 UBE2AP49459 152 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 LBHQ53QV2 105 aaPredicted RBP3.1□□□□□ -1.91
SVIP-202ENST00000525670 SOSTDC1Q6X4U4 206 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 FAM19A1Q7Z5A9 133 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 PCP2Q8IVA1 136 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 MIEN1Q9BRT3 115 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
SVIP-202ENST00000525670 SCGB1D1O95968 90 aa3.09□□□□□ -1.91
SVIP-202ENST00000525670 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
SVIP-202ENST00000525670 HERV-K104P63124 156 aa3.09□□□□□ -1.91
SVIP-202ENST00000525670 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
SVIP-202ENST00000525670 SCGB1D4Q6XE38 83 aa3.09□□□□□ -1.91
SVIP-202ENST00000525670 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.92
SVIP-202ENST00000525670 TRBV10-3A0A0K0K1G6 114 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 H0Y9J4 135 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 BCE1O60756 84 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 COX17Q14061 63 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 SFTA2Q6UW10 78 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 DIRC1Q969H9 104 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
SVIP-202ENST00000525670 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 M0R378 163 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 OXTP01178 125 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 SRSF9Q13242 221 aaKnown RBP eCLIP3.07□□□□□ -1.92
SVIP-202ENST00000525670 Q8NBF4 154 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 OR13C6PQ8NH95 151 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
SVIP-202ENST00000525670 ETDCA0A1B0GVM5 59 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 HSBP1L1C9JCN9 74 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 ZNF861PO60384 105 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 DDTP30046 118 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
SVIP-202ENST00000525670 S100A7L2Q5SY68 101 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 LINC00308Q8TCZ7 52 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 C12orf57Q99622 126 aa3.06□□□□□ -1.92
SVIP-202ENST00000525670 C5orf52A6NGY3 159 aa3.05□□□□□ -1.92
SVIP-202ENST00000525670 LINC01600Q96MT4 127 aa3.05□□□□□ -1.92
SVIP-202ENST00000525670 SPANXB1Q9NS25 103 aaPredicted RBP3.05□□□□□ -1.92
SVIP-202ENST00000525670 TRAV23DV6A0A075B6W5 121 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 LINC00587B1AMM8 73 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 TSPAN13O95857 204 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 AKR1D1P51857 326 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 SPATA45Q537H7 98 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 KRTAP13-1Q8IUC0 172 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 LINC00337Q8N6G1 96 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 C14orf144Q96I85 54 aa3.04□□□□□ -1.92
SVIP-202ENST00000525670 LPAP08519 4548 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 ERC2-IT1O76042 136 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 MUSTN1Q8IVN3 82 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 C3orf22Q8N5N4 141 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 SPANXCQ9NY87 97 aa3.03□□□□□ -1.92
SVIP-202ENST00000525670 LRP2P98164 4655 aa3.02□□□□□ -1.93
SVIP-202ENST00000525670 A6NDN8 102 aa3.02□□□□□ -1.93
SVIP-202ENST00000525670 H7C2G1 150 aa3.02□□□□□ -1.93
SVIP-202ENST00000525670 TIMM17BO60830 172 aa3.02□□□□□ -1.93
SVIP-202ENST00000525670 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms