RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 LITAFQ99732 161 aa10.34□□□□□ -0.75
NR1H3-228ENST00000525441 SPANXB1Q9NS25 103 aaPredicted RBP10.34□□□□□ -0.75
NR1H3-228ENST00000525441 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
NR1H3-228ENST00000525441 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
NR1H3-228ENST00000525441 NDUFC2O95298 119 aa10.32□□□□□ -0.76
NR1H3-228ENST00000525441 SPRR1AP35321 89 aa10.32□□□□□ -0.76
NR1H3-228ENST00000525441 LRP2P98164 4655 aa10.31□□□□□ -0.76
NR1H3-228ENST00000525441 DDTP30046 118 aa10.31□□□□□ -0.76
NR1H3-228ENST00000525441 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
NR1H3-228ENST00000525441 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
NR1H3-228ENST00000525441 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
NR1H3-228ENST00000525441 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
NR1H3-228ENST00000525441 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
NR1H3-228ENST00000525441 S100A7L2Q5SY68 101 aa10.29□□□□□ -0.76
NR1H3-228ENST00000525441 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
NR1H3-228ENST00000525441 UQCR10Q9UDW1 63 aa10.29□□□□□ -0.76
NR1H3-228ENST00000525441 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
NR1H3-228ENST00000525441 TSPAN13O95857 204 aa10.28□□□□□ -0.76
NR1H3-228ENST00000525441 NPC2P61916 151 aa10.28□□□□□ -0.76
NR1H3-228ENST00000525441 C2orf91Q6ZV80 131 aa10.28□□□□□ -0.76
NR1H3-228ENST00000525441 Q6ZVH6 145 aa10.28□□□□□ -0.76
NR1H3-228ENST00000525441 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.77
NR1H3-228ENST00000525441 SPRR4Q96PI1 79 aa10.27□□□□□ -0.77
NR1H3-228ENST00000525441 PRR4Q16378 134 aa10.26□□□□□ -0.77
NR1H3-228ENST00000525441 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
NR1H3-228ENST00000525441 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
NR1H3-228ENST00000525441 PPDPFQ9H3Y8 114 aa10.26□□□□□ -0.77
NR1H3-228ENST00000525441 IGLV6-57P01721 117 aa10.25□□□□□ -0.77
NR1H3-228ENST00000525441 IFITM1P13164 125 aa10.25□□□□□ -0.77
NR1H3-228ENST00000525441 LINC00308Q8TCZ7 52 aa10.25□□□□□ -0.77
NR1H3-228ENST00000525441 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
NR1H3-228ENST00000525441 CBY1Q9Y3M2 126 aa10.25□□□□□ -0.77
NR1H3-228ENST00000525441 B5MCH6 92 aa10.24□□□□□ -0.77
NR1H3-228ENST00000525441 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
NR1H3-228ENST00000525441 COPS9Q8WXC6 57 aa10.23□□□□□ -0.77
NR1H3-228ENST00000525441 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
NR1H3-228ENST00000525441 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
NR1H3-228ENST00000525441 CTAG1AP78358 180 aa10.21□□□□□ -0.77
NR1H3-228ENST00000525441 TAL2Q16559 108 aa10.21□□□□□ -0.77
NR1H3-228ENST00000525441 Q6ZRX8 168 aa10.21□□□□□ -0.77
NR1H3-228ENST00000525441 C3orf22Q8N5N4 141 aa10.21□□□□□ -0.77
NR1H3-228ENST00000525441 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
NR1H3-228ENST00000525441 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
NR1H3-228ENST00000525441 ZNF73O43830 326 aaPredicted RBP10.19□□□□□ -0.78
NR1H3-228ENST00000525441 HINT1P49773 126 aaPredicted RBP10.18□□□□□ -0.78
NR1H3-228ENST00000525441 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
NR1H3-228ENST00000525441 HSD52Q0P140 79 aa10.17□□□□□ -0.78
NR1H3-228ENST00000525441 LINC00483Q53H64 154 aa10.17□□□□□ -0.78
NR1H3-228ENST00000525441 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
NR1H3-228ENST00000525441 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
NR1H3-228ENST00000525441 Q9BRP9 147 aa10.16□□□□□ -0.78
NR1H3-228ENST00000525441 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
NR1H3-228ENST00000525441 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
NR1H3-228ENST00000525441 CEND1Q8N111 149 aa10.15□□□□□ -0.78
NR1H3-228ENST00000525441 A4D1N5 150 aa10.12□□□□□ -0.79
NR1H3-228ENST00000525441 LPAP08519 4548 aa10.11□□□□□ -0.79
NR1H3-228ENST00000525441 Q8NBF4 154 aa10.11□□□□□ -0.79
NR1H3-228ENST00000525441 RETNLBQ9BQ08 111 aa10.1□□□□□ -0.79
NR1H3-228ENST00000525441 TMEM238LA0A1B0GVL6 79 aa10.09□□□□□ -0.79
NR1H3-228ENST00000525441 A6NJY4 79 aa10.09□□□□□ -0.79
NR1H3-228ENST00000525441 FXYD2P54710 66 aa10.09□□□□□ -0.79
NR1H3-228ENST00000525441 IGLV9-49A0A0B4J1Y8 123 aa10.08□□□□□ -0.8
NR1H3-228ENST00000525441 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
NR1H3-228ENST00000525441 MOBPQ13875 183 aa10.07□□□□□ -0.8
NR1H3-228ENST00000525441 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
NR1H3-228ENST00000525441 RNF213Q63HN8 5207 aa10.07□□□□□ -0.8
NR1H3-228ENST00000525441 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
NR1H3-228ENST00000525441 M0R143 59 aa10.06□□□□□ -0.8
NR1H3-228ENST00000525441 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
NR1H3-228ENST00000525441 CFC1P0CG37 223 aa10.06□□□□□ -0.8
NR1H3-228ENST00000525441 BVES-AS1Q5T3Y7 98 aa10.06□□□□□ -0.8
NR1H3-228ENST00000525441 A0A0B4J2C4 111 aa10.05□□□□□ -0.8
NR1H3-228ENST00000525441 SPINK1P00995 79 aa10.05□□□□□ -0.8
NR1H3-228ENST00000525441 COX7BP24311 80 aa10.05□□□□□ -0.8
NR1H3-228ENST00000525441 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
NR1H3-228ENST00000525441 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
NR1H3-228ENST00000525441 A6NDN8 102 aa10.04□□□□□ -0.8
NR1H3-228ENST00000525441 ELOF1P60002 83 aaKnown RBP10.04□□□□□ -0.8
NR1H3-228ENST00000525441 ST20-AS1Q8NBB2 130 aa10.04□□□□□ -0.8
NR1H3-228ENST00000525441 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
NR1H3-228ENST00000525441 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
NR1H3-228ENST00000525441 C9orf153Q5TBE3 101 aa10.02□□□□□ -0.81
NR1H3-228ENST00000525441 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
NR1H3-228ENST00000525441 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
NR1H3-228ENST00000525441 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
NR1H3-228ENST00000525441 TPRXLQ17RH7 258 aa10□□□□□ -0.81
NR1H3-228ENST00000525441 SPRR1BP22528 89 aa9.99□□□□□ -0.81
NR1H3-228ENST00000525441 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
NR1H3-228ENST00000525441 PRO1854Q9UHT4 67 aa9.99□□□□□ -0.81
NR1H3-228ENST00000525441 CDIP1Q9H305 208 aa9.98□□□□□ -0.81
NR1H3-228ENST00000525441 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
NR1H3-228ENST00000525441 PCP4L1A6NKN8 68 aa9.96□□□□□ -0.82
NR1H3-228ENST00000525441 K7ERJ3 54 aa9.96□□□□□ -0.82
NR1H3-228ENST00000525441 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
NR1H3-228ENST00000525441 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
NR1H3-228ENST00000525441 SLC25A20O43772 301 aa9.93□□□□□ -0.82
NR1H3-228ENST00000525441 BATFQ16520 125 aa9.93□□□□□ -0.82
NR1H3-228ENST00000525441 DEFB105AQ8NG35 78 aa9.93□□□□□ -0.82
NR1H3-228ENST00000525441 SNHG12Q9BXW3 62 aa9.92□□□□□ -0.82
NR1H3-228ENST00000525441 H7C2G1 150 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms