RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MPC2O95563 127 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 S100A8P05109 93 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 MGPP08493 103 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 HRES1P13985 223 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 RAB5BP61020 215 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 MRPL51Q4U2R6 128 aaKnown RBP0.64□□□□□ -2.31
CD44-212ENST00000524922 Q5VV11 94 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 Q6ZUT4 128 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 ENKURQ8TC29 256 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 PPP1R1CQ8WVI7 109 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 MBD3L1Q8WWY6 194 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 HIGD2AQ9BW72 106 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 EIF5A2Q9GZV4 153 aaKnown RBP0.64□□□□□ -2.31
CD44-212ENST00000524922 PRO1933Q9H354 126 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 XAGE1AQ9HD64 81 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 PRO2289Q9P1D8 64 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 LAMTOR3Q9UHA4 124 aa0.64□□□□□ -2.31
CD44-212ENST00000524922 LSM5Q9Y4Y9 91 aaKnown RBP0.64□□□□□ -2.31
CD44-212ENST00000524922 IGLV5-48A0A075B6I7 105 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 BORCS7-ASMTA0A0B4J1R7 106 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 A0A1B0GUT8 65 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 ETDCA0A1B0GVM5 59 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 MAP1LC3B2A6NCE7 125 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 HMSDA8MTL9 139 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 TMEM250H0YL14 139 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 H3BRM9 83 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 TEX46H3BTG2 121 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 H7C2G1 150 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 NOL3O60936 208 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 NDUFC2O95298 119 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 MT1BP07438 61 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 RAB4AP20338 218 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 RAB5AP20339 215 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 S100A5P33763 92 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 AKR1D1P51857 326 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 IFITM2Q01629 132 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 ZNF345Q14585 488 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 NEDD8Q15843 81 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 ORMDL2Q53FV1 153 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 RNASE13Q5GAN3 156 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 TRIQKQ629K1 86 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 Q6JHZ5 121 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 Q6Q795 121 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 C2orf82Q6UX34 121 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 TMEM136Q6ZRR5 245 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 ATP5L2Q7Z4Y8 100 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 COX7B2Q8TF08 81 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 ZCCHC13Q8WW36 166 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 PPDPFLQ8WWR9 84 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 BORCS7Q96B45 105 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 RPL39LQ96EH5 51 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 MARVELD1Q9BSK0 173 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 MAP1LC3BQ9GZQ8 125 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 SS18L2Q9UHA2 77 aa0.63□□□□□ -2.31
CD44-212ENST00000524922 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CD44-212ENST00000524922 TRBV20OR9-2A0A075B6H5 130 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 TMSB15BA0A087X1C1 80 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 TEX49A0A1B0GTD5 131 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 A4D1N5 150 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 LINC01546A6NGU7 62 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 IGIPA6NJ69 53 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 F8W036 122 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 INMT-MINDY4F8WBC2 141 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 LYRM1O43325 122 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 ATP6V1G1O75348 118 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 C3orf79P0CE67 100 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 PFN2P35080 140 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 HINT1P49773 126 aaPredicted RBP0.62□□□□□ -2.31
CD44-212ENST00000524922 GNG4P50150 75 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 ZNF726P1Q15940 193 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 PYDC2Q56P42 97 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 CENPWQ5EE01 88 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 AKR1C8PQ5T2L2 129 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 FAM104BQ5XKR9 115 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 Q8NDZ9 215 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 Q9BRP9 147 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 VCX2Q9H322 139 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 SND1-IT1Q9HBX3 110 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 SPANXB1Q9NS25 103 aaPredicted RBP0.62□□□□□ -2.31
CD44-212ENST00000524922 ERG28Q9UKR5 140 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 CYSLTR1Q9Y271 337 aa0.62□□□□□ -2.31
CD44-212ENST00000524922 FAM236DA0A1B0GTK5 79 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 HIGD1CA8MV81 97 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 K7EQZ3 153 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 ZNF73O43830 326 aaPredicted RBP0.61□□□□□ -2.31
CD44-212ENST00000524922 ERC2-IT1O76042 136 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 IGLC3P0DOY3 106 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 FAM236CP0DP71 79 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 IL7P13232 177 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 H2BFSP57053 126 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 C9orf153Q5TBE3 101 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 ERASQ7Z444 233 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 COMMD7Q86VX2 200 aa0.61□□□□□ -2.31
CD44-212ENST00000524922 WFDC13Q8IUB5 93 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms