RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 S100A6P06703 90 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 Q6ZVH6 145 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 SPANXDQ9BXN6 97 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
TRAPPC9-215ENST00000524162 Q6ZRX8 168 aa12.24□□□□□ -0.45
TRAPPC9-215ENST00000524162 TRAV23DV6A0A075B6W5 121 aa12.23□□□□□ -0.45
TRAPPC9-215ENST00000524162 NPC2P61916 151 aa12.23□□□□□ -0.45
TRAPPC9-215ENST00000524162 LINC00518Q8N0U6 118 aa12.23□□□□□ -0.45
TRAPPC9-215ENST00000524162 SMCR5Q8TEV8 140 aa12.23□□□□□ -0.45
TRAPPC9-215ENST00000524162 SCGB1D4Q6XE38 83 aa12.22□□□□□ -0.45
TRAPPC9-215ENST00000524162 IFITM1P13164 125 aa12.21□□□□□ -0.45
TRAPPC9-215ENST00000524162 JOSD1Q15040 202 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-215ENST00000524162 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-215ENST00000524162 LINC00483Q53H64 154 aa12.2□□□□□ -0.46
TRAPPC9-215ENST00000524162 ATOH7Q8N100 152 aa12.2□□□□□ -0.46
TRAPPC9-215ENST00000524162 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
TRAPPC9-215ENST00000524162 LINC00304Q8N9R0 145 aa12.19□□□□□ -0.46
TRAPPC9-215ENST00000524162 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
TRAPPC9-215ENST00000524162 Q9BRP9 147 aa12.17□□□□□ -0.46
TRAPPC9-215ENST00000524162 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-215ENST00000524162 SPAG11AQ6PDA7 123 aa12.15□□□□□ -0.46
TRAPPC9-215ENST00000524162 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
TRAPPC9-215ENST00000524162 C3orf22Q8N5N4 141 aa12.13□□□□□ -0.47
TRAPPC9-215ENST00000524162 ERC2-IT1O76042 136 aa12.12□□□□□ -0.47
TRAPPC9-215ENST00000524162 TSPAN13O95857 204 aa12.12□□□□□ -0.47
TRAPPC9-215ENST00000524162 OR13C6PQ8NH95 151 aa12.12□□□□□ -0.47
TRAPPC9-215ENST00000524162 LPAP08519 4548 aa12.09□□□□□ -0.47
TRAPPC9-215ENST00000524162 TRBV7-6A0A0J9YX20 115 aa12.09□□□□□ -0.47
TRAPPC9-215ENST00000524162 DHRS4-AS1Q9P1J3 65 aa12.09□□□□□ -0.47
TRAPPC9-215ENST00000524162 PRR4Q16378 134 aa12.08□□□□□ -0.48
TRAPPC9-215ENST00000524162 GAGE2AQ6NT46 116 aa12.08□□□□□ -0.48
TRAPPC9-215ENST00000524162 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
TRAPPC9-215ENST00000524162 ELOF1P60002 83 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-215ENST00000524162 SSBP3-AS1Q7Z2R9 100 aa12.06□□□□□ -0.48
TRAPPC9-215ENST00000524162 TRAV13-2A0A0B4J235 113 aa12.03□□□□□ -0.48
TRAPPC9-215ENST00000524162 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
TRAPPC9-215ENST00000524162 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
TRAPPC9-215ENST00000524162 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
TRAPPC9-215ENST00000524162 SPINK1P00995 79 aa12.02□□□□□ -0.49
TRAPPC9-215ENST00000524162 SPRR1BP22528 89 aa12.02□□□□□ -0.49
TRAPPC9-215ENST00000524162 COX7BP24311 80 aa12.02□□□□□ -0.49
TRAPPC9-215ENST00000524162 Q8NBF4 154 aa12.02□□□□□ -0.49
TRAPPC9-215ENST00000524162 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-215ENST00000524162 A0A1B0GWB2 263 aa12□□□□□ -0.49
TRAPPC9-215ENST00000524162 A4D1N5 150 aa11.99□□□□□ -0.49
TRAPPC9-215ENST00000524162 A6NDN8 102 aa11.99□□□□□ -0.49
TRAPPC9-215ENST00000524162 DLEU1O43261 78 aa11.99□□□□□ -0.49
TRAPPC9-215ENST00000524162 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
TRAPPC9-215ENST00000524162 COX8AP10176 69 aa11.98□□□□□ -0.49
TRAPPC9-215ENST00000524162 RNF213Q63HN8 5207 aa11.98□□□□□ -0.49
TRAPPC9-215ENST00000524162 MOBPQ13875 183 aa11.97□□□□□ -0.49
TRAPPC9-215ENST00000524162 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
TRAPPC9-215ENST00000524162 IGLV9-49A0A0B4J1Y8 123 aa11.95□□□□□ -0.5
TRAPPC9-215ENST00000524162 FP248Q71RG6 208 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-215ENST00000524162 TPRXLQ17RH7 258 aa11.93□□□□□ -0.5
TRAPPC9-215ENST00000524162 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
TRAPPC9-215ENST00000524162 SMIM11BQ8TCY0 68 aa11.91□□□□□ -0.5
TRAPPC9-215ENST00000524162 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-215ENST00000524162 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
TRAPPC9-215ENST00000524162 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
TRAPPC9-215ENST00000524162 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
TRAPPC9-215ENST00000524162 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
TRAPPC9-215ENST00000524162 IGLV5-48A0A075B6I7 105 aa11.88□□□□□ -0.51
TRAPPC9-215ENST00000524162 C9orf153Q5TBE3 101 aa11.88□□□□□ -0.51
TRAPPC9-215ENST00000524162 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
TRAPPC9-215ENST00000524162 VAMP3Q15836 100 aa11.87□□□□□ -0.51
TRAPPC9-215ENST00000524162 TAL2Q16559 108 aa11.87□□□□□ -0.51
TRAPPC9-215ENST00000524162 VAMP8Q9BV40 100 aa11.86□□□□□ -0.51
TRAPPC9-215ENST00000524162 SPATA45Q537H7 98 aa11.85□□□□□ -0.51
TRAPPC9-215ENST00000524162 SLC25A20O43772 301 aa11.84□□□□□ -0.51
TRAPPC9-215ENST00000524162 Q8N377 158 aa11.84□□□□□ -0.51
TRAPPC9-215ENST00000524162 PAM16Q9Y3D7 125 aa11.84□□□□□ -0.51
TRAPPC9-215ENST00000524162 LINC01547P58512 204 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-215ENST00000524162 C14orf144Q96I85 54 aa11.83□□□□□ -0.52
TRAPPC9-215ENST00000524162 CD164Q04900 197 aa11.81□□□□□ -0.52
TRAPPC9-215ENST00000524162 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
TRAPPC9-215ENST00000524162 SMIM29Q86T20 159 aa11.8□□□□□ -0.52
TRAPPC9-215ENST00000524162 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
TRAPPC9-215ENST00000524162 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
TRAPPC9-215ENST00000524162 CDIP1Q9H305 208 aa11.78□□□□□ -0.52
TRAPPC9-215ENST00000524162 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
TRAPPC9-215ENST00000524162 C2orf91Q6ZV80 131 aa11.77□□□□□ -0.53
TRAPPC9-215ENST00000524162 Q1RN00 199 aa11.76□□□□□ -0.53
TRAPPC9-215ENST00000524162 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
TRAPPC9-215ENST00000524162 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
TRAPPC9-215ENST00000524162 hADV29S1A0JD25 119 aa11.75□□□□□ -0.53
TRAPPC9-215ENST00000524162 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
TRAPPC9-215ENST00000524162 CFC1P0CG37 223 aa11.74□□□□□ -0.53
TRAPPC9-215ENST00000524162 KRTAP13-3Q3SY46 172 aa11.74□□□□□ -0.53
TRAPPC9-215ENST00000524162 PYY3Q5JQD4 70 aa11.74□□□□□ -0.53
TRAPPC9-215ENST00000524162 C12orf57Q99622 126 aa11.73□□□□□ -0.53
TRAPPC9-215ENST00000524162 Q5XG85 94 aa11.72□□□□□ -0.53
TRAPPC9-215ENST00000524162 MUC2Q02817 5179 aa11.72□□□□□ -0.53
TRAPPC9-215ENST00000524162 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.53
TRAPPC9-215ENST00000524162 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
TRAPPC9-215ENST00000524162 A6NJY4 79 aa11.7□□□□□ -0.54
TRAPPC9-215ENST00000524162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-215ENST00000524162 CEND1Q8N111 149 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms