RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	LINC00575	Q6W349	94 aa		5.25	□□□□□ -1.57
SPIDR-223	ENST00000524033	LYRM9	A8MSI8	78 aa		5.24	□□□□□ -1.57
SPIDR-223	ENST00000524033	NDUFC2-KCTD14	E9PQ53	114 aa		5.24	□□□□□ -1.57
SPIDR-223	ENST00000524033		Q6ZQT0	140 aa		5.24	□□□□□ -1.57
SPIDR-223	ENST00000524033	C11orf45	Q8TAV5	145 aa		5.24	□□□□□ -1.57
SPIDR-223	ENST00000524033	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.24	□□□□□ -1.57
SPIDR-223	ENST00000524033	LOC107984640	A0A0U1RRK4	108 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	OXT	P01178	125 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	IGLV6-57	P01721	117 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	DEFB130B	P0DP73	79 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	DEFB130A	P0DP74	79 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	PRR3	P79522	188 aa	Known RBP	5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	LCE4A	Q5TA78	99 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	CFAP161	Q6P656	301 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	CLPSL2	Q6UWE3	100 aa		5.23	□□□□□ -1.57
SPIDR-223	ENST00000524033	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.22	□□□□□ -1.57
SPIDR-223	ENST00000524033		H3BQ85	93 aa		5.22	□□□□□ -1.57
SPIDR-223	ENST00000524033	DEFB4A	O15263	64 aa		5.22	□□□□□ -1.57
SPIDR-223	ENST00000524033	C6orf99	Q4VX62	202 aa		5.22	□□□□□ -1.57
SPIDR-223	ENST00000524033	DPH3	Q96FX2	82 aa		5.22	□□□□□ -1.57
SPIDR-223	ENST00000524033	DNAH10	Q8IVF4	4471 aa		5.21	□□□□□ -1.57
SPIDR-223	ENST00000524033	EPM2A	B3EWF7	344 aa		5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	REG3A	Q06141	175 aa		5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	C9orf116	Q5BN46	136 aa	Predicted RBP	5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	FAM19A1	Q7Z5A9	133 aa		5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	LINC00269	Q8N2A0	174 aa		5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	VPS13D	Q5THJ4	4388 aa		5.21	□□□□□ -1.58
SPIDR-223	ENST00000524033	KRTAP9-7	A8MTY7	169 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033		M0R2N4	97 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033	SPAG11B	Q08648	103 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033	C10orf25	Q5T742	122 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033		Q8N1X5	172 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033	UBL5	Q9BZL1	73 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033	PRR34	Q9NV39	138 aa		5.2	□□□□□ -1.58
SPIDR-223	ENST00000524033	TRBV7-6	A0A0J9YX20	115 aa		5.19	□□□□□ -1.58
SPIDR-223	ENST00000524033	MIF	P14174	115 aa		5.19	□□□□□ -1.58
SPIDR-223	ENST00000524033	KRTAP10-2	P60368	255 aa		5.19	□□□□□ -1.58
SPIDR-223	ENST00000524033	LELP1	Q5T871	98 aa		5.19	□□□□□ -1.58
SPIDR-223	ENST00000524033		Q8NAQ8	132 aa		5.19	□□□□□ -1.58
SPIDR-223	ENST00000524033	TRAV7	A0A075B6U4	112 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033		A0A096LPF7	62 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	TRBV7-4	A0A0J9YYF1	115 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	ANG	P03950	147 aa	Known RBP	5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	PDE6G	P18545	87 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	RBM3	P98179	157 aa	Known RBP	5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	ENHO	Q6UWT2	76 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033		Q6ZVQ6	151 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	DNAH2	Q9P225	4427 aa		5.18	□□□□□ -1.58
SPIDR-223	ENST00000524033	HERC2	O95714	4834 aa		5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	PCLO	Q9Y6V0	5065 aa		5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	LINC01547	P58512	204 aa	Predicted RBP	5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	C5orf47	Q569G3	176 aa		5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	APLN	Q9ULZ1	77 aa		5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	CELA1	Q9UNI1	258 aa		5.17	□□□□□ -1.58
SPIDR-223	ENST00000524033	IGLV10-54	A0A075B6I4	117 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	TRAV23DV6	A0A075B6W5	121 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	TRAV10	A0A0B4J240	114 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	CXCL6	P80162	114 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033		Q5XG85	94 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	KRTAP26-1	Q6PEX3	210 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033		Q6ZTC4	211 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	DIRC1	Q969H9	104 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	DSCR8	Q96T75	97 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	C6orf48	Q9UBA6	75 aa		5.16	□□□□□ -1.58
SPIDR-223	ENST00000524033	VPREB1	P12018	145 aa		5.15	□□□□□ -1.59
SPIDR-223	ENST00000524033	ELOF1	P60002	83 aa	Known RBP	5.15	□□□□□ -1.59
SPIDR-223	ENST00000524033	DAD1	P61803	113 aa		5.15	□□□□□ -1.59
SPIDR-223	ENST00000524033		Q6ZQY7	126 aa		5.15	□□□□□ -1.59
SPIDR-223	ENST00000524033	DEFB131B	A0A096LNP1	70 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033		H7BZZ5	65 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	SPART-AS1	P0CW21	52 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	COX7B	P24311	80 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	KLKP1	Q107X0	134 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	FAT2	Q9NYQ8	4349 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	DNAH6	Q9C0G6	4158 aa		5.14	□□□□□ -1.59
SPIDR-223	ENST00000524033	RYR1	P21817	5038 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	PKHD1	P08F94	4074 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	FAM236D	A0A1B0GTK5	79 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	FAM236C	P0DP71	79 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	KRTAP9-9	Q9BYP9	154 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	KRTAP9-4	Q9BYQ2	154 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	LAMTOR3	Q9UHA4	124 aa		5.13	□□□□□ -1.59
SPIDR-223	ENST00000524033	PKD1	P98161	4303 aa		5.12	□□□□□ -1.59
SPIDR-223	ENST00000524033	C20orf197	Q8N268	126 aa		5.12	□□□□□ -1.59
SPIDR-223	ENST00000524033	DNAH17	Q9UFH2	4485 aa		5.11	□□□□□ -1.59
SPIDR-223	ENST00000524033	ZNF73	O43830	326 aa	Predicted RBP	5.11	□□□□□ -1.59
SPIDR-223	ENST00000524033	KLK12	Q9UKR0	248 aa		5.11	□□□□□ -1.59
SPIDR-223	ENST00000524033	SERP1	Q9Y6X1	66 aa		5.11	□□□□□ -1.59
SPIDR-223	ENST00000524033	KIAA1109	Q2LD37	5005 aa		5.11	□□□□□ -1.59
SPIDR-223	ENST00000524033		M0R378	163 aa		5.1	□□□□□ -1.59
SPIDR-223	ENST00000524033	LINC00336	Q6ZUF6	198 aa		5.1	□□□□□ -1.59
SPIDR-223	ENST00000524033	C15orf56	Q8N910	161 aa		5.1	□□□□□ -1.59
SPIDR-223	ENST00000524033		F8WDY8	70 aa		5.09	□□□□□ -1.59
SPIDR-223	ENST00000524033		H3BNG1	76 aa		5.09	□□□□□ -1.59
SPIDR-223	ENST00000524033	ERC2-IT1	O76042	136 aa		5.09	□□□□□ -1.59
SPIDR-223	ENST00000524033	HTN3	P15516	51 aa		5.09	□□□□□ -1.59
SPIDR-223	ENST00000524033	IGKV4-1	P06312	121 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms