RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CBY1Q9Y3M2 126 aa13.23□□□□□ -0.29
SQLE-206ENST00000523430 IGLV1-50A0A075B6I6 118 aa13.23□□□□□ -0.29
SQLE-206ENST00000523430 TRBV7-6A0A0J9YX20 115 aa13.23□□□□□ -0.29
SQLE-206ENST00000523430 A0A1W2PNN7 141 aa13.23□□□□□ -0.29
SQLE-206ENST00000523430 C3orf84H3BNL1 204 aa13.23□□□□□ -0.29
SQLE-206ENST00000523430 FUSP35637 526 aaKnown RBP eCLIP13.23□□□□□ -0.29
SQLE-206ENST00000523430 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
SQLE-206ENST00000523430 SDIM1Q6ZPB5 146 aa13.21□□□□□ -0.3
SQLE-206ENST00000523430 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
SQLE-206ENST00000523430 VPS25Q9BRG1 176 aa13.19□□□□□ -0.3
SQLE-206ENST00000523430 PRYO14603 147 aa13.19□□□□□ -0.3
SQLE-206ENST00000523430 SNCGO76070 127 aa13.19□□□□□ -0.3
SQLE-206ENST00000523430 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
SQLE-206ENST00000523430 PANO1I0J062 215 aa13.17□□□□□ -0.3
SQLE-206ENST00000523430 Q6ZQY7 126 aa13.17□□□□□ -0.3
SQLE-206ENST00000523430 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
SQLE-206ENST00000523430 RTL8CO15255 209 aa13.15□□□□□ -0.3
SQLE-206ENST00000523430 SPRR1AP35321 89 aa13.15□□□□□ -0.3
SQLE-206ENST00000523430 KRTAP4-16G5E9R7 235 aaPredicted RBP13.14□□□□□ -0.31
SQLE-206ENST00000523430 A0A1B0GV72 72 aa13.14□□□□□ -0.31
SQLE-206ENST00000523430 HECTD4Q9Y4D8 3996 aa13.13□□□□□ -0.31
SQLE-206ENST00000523430 FRAS1Q86XX4 4008 aa13.12□□□□□ -0.31
SQLE-206ENST00000523430 TMEM256-PLSCR3K7ERE1 68 aa13.12□□□□□ -0.31
SQLE-206ENST00000523430 TNP2Q05952 138 aa13.12□□□□□ -0.31
SQLE-206ENST00000523430 B5MCH6 92 aa13.11□□□□□ -0.31
SQLE-206ENST00000523430 Q6ZRX8 168 aa13.11□□□□□ -0.31
SQLE-206ENST00000523430 PHF5AQ7RTV0 110 aaKnown RBP13.11□□□□□ -0.31
SQLE-206ENST00000523430 OBSCN-AS1Q96MR7 158 aa13.11□□□□□ -0.31
SQLE-206ENST00000523430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.11□□□□□ -0.31
SQLE-206ENST00000523430 LINC00474Q9P2X8 69 aa13.1□□□□□ -0.31
SQLE-206ENST00000523430 ETDCA0A1B0GVM5 59 aa13.1□□□□□ -0.31
SQLE-206ENST00000523430 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
SQLE-206ENST00000523430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.1□□□□□ -0.31
SQLE-206ENST00000523430 SPACA4Q8TDM5 124 aa13.09□□□□□ -0.31
SQLE-206ENST00000523430 C14orf132Q9NPU4 83 aa13.09□□□□□ -0.31
SQLE-206ENST00000523430 INAFM2P0DMQ5 153 aa13.08□□□□□ -0.32
SQLE-206ENST00000523430 KRTAP11-1Q8IUC1 163 aa13.08□□□□□ -0.32
SQLE-206ENST00000523430 Q9BRP9 147 aa13.08□□□□□ -0.32
SQLE-206ENST00000523430 CDIP1Q9H305 208 aa13.08□□□□□ -0.32
SQLE-206ENST00000523430 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
SQLE-206ENST00000523430 UBE2BP63146 152 aa13.04□□□□□ -0.32
SQLE-206ENST00000523430 DNAH11Q96DT5 4516 aa13.04□□□□□ -0.32
SQLE-206ENST00000523430 SACSQ9NZJ4 4579 aa13.03□□□□□ -0.32
SQLE-206ENST00000523430 DPH3Q96FX2 82 aa13.03□□□□□ -0.32
SQLE-206ENST00000523430 DHRS4-AS1Q9P1J3 65 aa13.03□□□□□ -0.32
SQLE-206ENST00000523430 FAT2Q9NYQ8 4349 aa13.03□□□□□ -0.32
SQLE-206ENST00000523430 LAMTOR3Q9UHA4 124 aa13.01□□□□□ -0.33
SQLE-206ENST00000523430 FAM240AA0A1B0GVK7 77 aa13□□□□□ -0.33
SQLE-206ENST00000523430 JMJD7-PLA2G4BH0Y9G9 81 aa13□□□□□ -0.33
SQLE-206ENST00000523430 H3BQ85 93 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 PRLHP81277 87 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 GAGE2AQ6NT46 116 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 ERC2-IT1O76042 136 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 KRTAP10-2P60368 255 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 FAM19A1Q7Z5A9 133 aa12.99□□□□□ -0.33
SQLE-206ENST00000523430 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
SQLE-206ENST00000523430 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
SQLE-206ENST00000523430 ST20-AS1Q8NBB2 130 aa12.97□□□□□ -0.33
SQLE-206ENST00000523430 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
SQLE-206ENST00000523430 DNAH8Q96JB1 4490 aa12.96□□□□□ -0.33
SQLE-206ENST00000523430 LINC01547P58512 204 aaPredicted RBP12.96□□□□□ -0.33
SQLE-206ENST00000523430 GHRHP01286 108 aa12.95□□□□□ -0.34
SQLE-206ENST00000523430 XGP55808 180 aa12.95□□□□□ -0.34
SQLE-206ENST00000523430 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
SQLE-206ENST00000523430 RBM3P98179 157 aaKnown RBP12.93□□□□□ -0.34
SQLE-206ENST00000523430 Q8N377 158 aa12.93□□□□□ -0.34
SQLE-206ENST00000523430 ACYP1P07311 99 aa12.92□□□□□ -0.34
SQLE-206ENST00000523430 PKD1P98161 4303 aa12.92□□□□□ -0.34
SQLE-206ENST00000523430 PLAC8Q9NZF1 115 aa12.91□□□□□ -0.34
SQLE-206ENST00000523430 IGLV5-48A0A075B6I7 105 aa12.9□□□□□ -0.34
SQLE-206ENST00000523430 MT-ATP8P03928 68 aa12.9□□□□□ -0.34
SQLE-206ENST00000523430 CCKP06307 115 aa12.9□□□□□ -0.34
SQLE-206ENST00000523430 SIGMAR1Q99720 223 aa12.9□□□□□ -0.34
SQLE-206ENST00000523430 HIGD2AQ9BW72 106 aa12.9□□□□□ -0.34
SQLE-206ENST00000523430 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
SQLE-206ENST00000523430 LOC110117498A0A087WWA1 95 aa12.88□□□□□ -0.35
SQLE-206ENST00000523430 LCE6AA0A183 80 aa12.88□□□□□ -0.35
SQLE-206ENST00000523430 Q6ZQT0 140 aa12.88□□□□□ -0.35
SQLE-206ENST00000523430 DSCR8Q96T75 97 aa12.87□□□□□ -0.35
SQLE-206ENST00000523430 BCE1O60756 84 aa12.87□□□□□ -0.35
SQLE-206ENST00000523430 H0Y9J4 135 aa12.85□□□□□ -0.35
SQLE-206ENST00000523430 UBE2AP49459 152 aa12.85□□□□□ -0.35
SQLE-206ENST00000523430 TRBV7-4A0A0J9YYF1 115 aa12.85□□□□□ -0.35
SQLE-206ENST00000523430 FAM30AQ9NZY2 134 aa12.84□□□□□ -0.35
SQLE-206ENST00000523430 KRTAP13-1Q8IUC0 172 aa12.83□□□□□ -0.36
SQLE-206ENST00000523430 LINC00846Q9NV44 126 aa12.83□□□□□ -0.36
SQLE-206ENST00000523430 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
SQLE-206ENST00000523430 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
SQLE-206ENST00000523430 SMIM29Q86T20 159 aa12.78□□□□□ -0.36
SQLE-206ENST00000523430 PDE6GP18545 87 aa12.78□□□□□ -0.36
SQLE-206ENST00000523430 CIRBP-AS1Q8TBR5 109 aa12.77□□□□□ -0.37
SQLE-206ENST00000523430 RYR2Q92736 4967 aa12.76□□□□□ -0.37
SQLE-206ENST00000523430 Q6ZSA8 131 aa12.76□□□□□ -0.37
SQLE-206ENST00000523430 HAMPP81172 84 aa12.75□□□□□ -0.37
SQLE-206ENST00000523430 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
SQLE-206ENST00000523430 LINC00643Q86TS7 51 aa12.74□□□□□ -0.37
SQLE-206ENST00000523430 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
SQLE-206ENST00000523430 KMT2CQ8NEZ4 4911 aaKnown RBP12.72□□□□□ -0.37
SQLE-206ENST00000523430 SPRR1BP22528 89 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms