RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 CCKP06307 115 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
SHPRH-210ENST00000523276 CASC10Q5T4H9 136 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 RMI2Q96E14 147 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
SHPRH-210ENST00000523276 DNAH9Q9NYC9 4486 aa4.35□□□□□ -1.71
SHPRH-210ENST00000523276 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
SHPRH-210ENST00000523276 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
SHPRH-210ENST00000523276 COX7BP24311 80 aa4.35□□□□□ -1.71
SHPRH-210ENST00000523276 ELOF1P60002 83 aaKnown RBP4.35□□□□□ -1.71
SHPRH-210ENST00000523276 H3BQ85 93 aa4.34□□□□□ -1.71
SHPRH-210ENST00000523276 Q6ZQY7 126 aa4.34□□□□□ -1.71
SHPRH-210ENST00000523276 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
SHPRH-210ENST00000523276 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
SHPRH-210ENST00000523276 LINC00846Q9NV44 126 aa4.34□□□□□ -1.71
SHPRH-210ENST00000523276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
SHPRH-210ENST00000523276 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
SHPRH-210ENST00000523276 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
SHPRH-210ENST00000523276 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
SHPRH-210ENST00000523276 Q6JHZ5 121 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 C7orf33Q8WU49 177 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 B9D2Q9BPU9 175 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 KCNQ1DNQ9H478 68 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
SHPRH-210ENST00000523276 Q6ZQT0 140 aa4.31□□□□□ -1.72
SHPRH-210ENST00000523276 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SHPRH-210ENST00000523276 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
SHPRH-210ENST00000523276 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
SHPRH-210ENST00000523276 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
SHPRH-210ENST00000523276 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
SHPRH-210ENST00000523276 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
SHPRH-210ENST00000523276 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
SHPRH-210ENST00000523276 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 LOC107984640A0A0U1RRK4 108 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 FAM168BA1KXE4 195 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 PDE6GP18545 87 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 Q75L30 129 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 DSCR8Q96T75 97 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 SEC61GP60059 68 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 UBE2DNLQ8IWF7 75 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
SHPRH-210ENST00000523276 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
SHPRH-210ENST00000523276 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
SHPRH-210ENST00000523276 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
SHPRH-210ENST00000523276 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
SHPRH-210ENST00000523276 PLECQ15149 4684 aaKnown RBP4.28□□□□□ -1.72
SHPRH-210ENST00000523276 RPL37AP8A6NKH3 93 aa4.28□□□□□ -1.73
SHPRH-210ENST00000523276 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.73
SHPRH-210ENST00000523276 CCDC179H3BU77 68 aa4.28□□□□□ -1.73
SHPRH-210ENST00000523276 SPRR1AP35321 89 aa4.28□□□□□ -1.73
SHPRH-210ENST00000523276 CNBPP62633 177 aaKnown RBP4.28□□□□□ -1.73
SHPRH-210ENST00000523276 UBL5Q9BZL1 73 aa4.28□□□□□ -1.73
SHPRH-210ENST00000523276 M0R2N4 97 aa4.27□□□□□ -1.73
SHPRH-210ENST00000523276 Q6ZRX8 168 aa4.27□□□□□ -1.73
SHPRH-210ENST00000523276 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
SHPRH-210ENST00000523276 LYSTQ99698 3801 aa4.27□□□□□ -1.73
SHPRH-210ENST00000523276 PSCAO43653 123 aa4.26□□□□□ -1.73
SHPRH-210ENST00000523276 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
SHPRH-210ENST00000523276 DHRS4-AS1Q9P1J3 65 aa4.26□□□□□ -1.73
SHPRH-210ENST00000523276 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
SHPRH-210ENST00000523276 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
SHPRH-210ENST00000523276 Q9BRP9 147 aa4.26□□□□□ -1.73
SHPRH-210ENST00000523276 A0A087WVE0 104 aa4.25□□□□□ -1.73
SHPRH-210ENST00000523276 NUPR2A6NF83 97 aa4.25□□□□□ -1.73
SHPRH-210ENST00000523276 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
SHPRH-210ENST00000523276 C14orf177Q52M58 125 aa4.25□□□□□ -1.73
SHPRH-210ENST00000523276 A0A096LNI7 61 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 ATOX1O00244 68 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 Q6ZVQ6 151 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 Q8N377 158 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 VPS13DQ5THJ4 4388 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 DNAH7Q8WXX0 4024 aa4.24□□□□□ -1.73
SHPRH-210ENST00000523276 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
SHPRH-210ENST00000523276 NBDYA0A0U1RRE5 68 aa4.23□□□□□ -1.73
SHPRH-210ENST00000523276 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
SHPRH-210ENST00000523276 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
SHPRH-210ENST00000523276 DEFB105AQ8NG35 78 aa4.23□□□□□ -1.73
SHPRH-210ENST00000523276 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 IGKV2-24A0A0C4DH68 120 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
SHPRH-210ENST00000523276 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.22□□□□□ -1.73
SHPRH-210ENST00000523276 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 C3orf22Q8N5N4 141 aa4.22□□□□□ -1.73
SHPRH-210ENST00000523276 UQCRQO14949 82 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 ERC2-IT1O76042 136 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 COX7CP15954 63 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 UBE2BP63146 152 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 CXCL6P80162 114 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 HAMPP81172 84 aa4.21□□□□□ -1.74
SHPRH-210ENST00000523276 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms