RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 TIMM17BO60830 172 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 ZNF22P17026 224 aaPredicted RBP2.42□□□□□ -2.02
SKP1-210ENST00000522855 RNASE4P34096 147 aaKnown RBP2.42□□□□□ -2.02
SKP1-210ENST00000522855 ZNF80P51504 273 aaPredicted RBP2.42□□□□□ -2.02
SKP1-210ENST00000522855 NPC2P61916 151 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 C4orf26Q17RF5 130 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 SPINK13Q1W4C9 94 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 PRR9Q5T870 116 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 HRCT1Q6UXD1 115 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 RMI2Q96E14 147 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 TIMM21Q9BVV7 248 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 WFDC10AQ9H1F0 79 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 DPH3P1Q9H4G8 78 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 TIMM8BQ9Y5J9 83 aaPredicted RBP2.42□□□□□ -2.02
SKP1-210ENST00000522855 ICOSQ9Y6W8 199 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 PRKDCP78527 4128 aaKnown RBP2.41□□□□□ -2.02
SKP1-210ENST00000522855 TRAV12-3A0A0B4J271 114 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 TRAV21A0A0B4J279 112 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 FAM236DA0A1B0GTK5 79 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 hADV29S1A0JD25 119 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 A8MTW9 85 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 FAM236CP0DP71 79 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 FXYD7P58549 80 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 KLKP1Q107X0 134 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 C1orf195Q5TG92 126 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 SMCR5Q8TEV8 140 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 KLK5Q9Y337 293 aaPredicted RBP2.41□□□□□ -2.02
SKP1-210ENST00000522855 TENM2Q9NT68 2774 aa2.41□□□□□ -2.02
SKP1-210ENST00000522855 TRAV26-2A0A0B4J265 109 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 TRBV7-6A0A0J9YX20 115 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 IGIPA6NJ69 53 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 COX7A2LO14548 114 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 NDUFC1O43677 76 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 S100A4P26447 101 aaKnown RBP2.4□□□□□ -2.03
SKP1-210ENST00000522855 CMC4P56277 68 aaPredicted RBP2.4□□□□□ -2.03
SKP1-210ENST00000522855 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 Q6ZRU5 148 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 OBSCN-AS1Q96MR7 158 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 SCGB3A1Q96QR1 104 aa2.4□□□□□ -2.03
SKP1-210ENST00000522855 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 A8MUU9 505 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 HTN1P15515 57 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 LGALS3P17931 250 aaKnown RBP2.39□□□□□ -2.03
SKP1-210ENST00000522855 CD164Q04900 197 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 LYPD5Q6UWN5 251 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 PRR15Q8IV56 129 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 WFDC9Q8NEX5 89 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 DSCR8Q96T75 97 aa2.39□□□□□ -2.03
SKP1-210ENST00000522855 IGHV6-1A0A0B4J1U7 121 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 H7BZZ5 65 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 GNRH2O43555 120 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
SKP1-210ENST00000522855 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 RHOHQ15669 191 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 MIAQ16674 131 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 SPANXN1Q5VSR9 72 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 FAM19A1Q7Z5A9 133 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 MUSTN1Q8IVN3 82 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 CYSTM1Q9H1C7 97 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 UBE2D4Q9Y2X8 147 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 PHLDA3Q9Y5J5 127 aa2.38□□□□□ -2.03
SKP1-210ENST00000522855 TRBV27A0A0K0K1C4 114 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 IBA57-AS1B1ANH7 110 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 I3L3M4 83 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 ERC2-IT1O76042 136 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 PRM2P04554 102 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
SKP1-210ENST00000522855 DEFB135Q30KP9 77 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 FP248Q71RG6 208 aaPredicted RBP2.37□□□□□ -2.03
SKP1-210ENST00000522855 MIR7-3HGQ8N6C7 128 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
SKP1-210ENST00000522855 HUWE1Q7Z6Z7 4374 aaKnown RBP2.36□□□□□ -2.03
SKP1-210ENST00000522855 TRAV7A0A075B6U4 112 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 MGPP08493 103 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 XCL1P47992 114 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 FAM74A4Q5TZK3 123 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 SFTA2Q6UW10 78 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 DAZ4Q86SG3 579 aaKnown RBP2.36□□□□□ -2.03
SKP1-210ENST00000522855 LINC00467Q9BRT7 94 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 DNAH7Q8WXX0 4024 aa2.36□□□□□ -2.03
SKP1-210ENST00000522855 DNAH9Q9NYC9 4486 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 TRGV1A0A0A0MS02 117 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 TRAV13-2A0A0B4J235 113 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 IGHV1-58A0A0C4DH39 117 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 DNAL4O96015 105 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 RPL28P46779 137 aaKnown RBP2.35□□□□□ -2.03
SKP1-210ENST00000522855 PMAIP1Q13794 54 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 Q6ZTI0 123 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 NOP10Q9NPE3 64 aaKnown RBP2.35□□□□□ -2.03
SKP1-210ENST00000522855 MEGF8Q7Z7M0 2845 aa2.35□□□□□ -2.03
SKP1-210ENST00000522855 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 IGHV3-73A0A0B4J1V6 119 aa2.34□□□□□ -2.03
SKP1-210ENST00000522855 H0YGX0 51 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 421.9 ms