RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 NDUFC1O43677 76 aa12.03□□□□□ -0.48
ARFGAP1-209ENST00000518794 KPRPQ5T749 579 aaPredicted RBP12.03□□□□□ -0.48
ARFGAP1-209ENST00000518794 Q6ZRU5 148 aa12.03□□□□□ -0.48
ARFGAP1-209ENST00000518794 Q6ZTC4 211 aa12.02□□□□□ -0.48
ARFGAP1-209ENST00000518794 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
ARFGAP1-209ENST00000518794 ATP5EP56381 51 aaPredicted RBP12.01□□□□□ -0.49
ARFGAP1-209ENST00000518794 LOC110117498A0A087WWA1 95 aa12□□□□□ -0.49
ARFGAP1-209ENST00000518794 COX7BP24311 80 aa12□□□□□ -0.49
ARFGAP1-209ENST00000518794 STAB1Q9NY15 2570 aa12□□□□□ -0.49
ARFGAP1-209ENST00000518794 VPREB1P12018 145 aa11.99□□□□□ -0.49
ARFGAP1-209ENST00000518794 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 TMEM254Q8TBM7 123 aa11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
ARFGAP1-209ENST00000518794 NREPQ16612 68 aa11.97□□□□□ -0.49
ARFGAP1-209ENST00000518794 MAST4O15021 2626 aa11.97□□□□□ -0.49
ARFGAP1-209ENST00000518794 BAHCC1Q9P281 2608 aa11.97□□□□□ -0.49
ARFGAP1-209ENST00000518794 ESRGQ1W209 222 aa11.96□□□□□ -0.49
ARFGAP1-209ENST00000518794 KRTAP10-11P60412 298 aa11.96□□□□□ -0.49
ARFGAP1-209ENST00000518794 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
ARFGAP1-209ENST00000518794 PMAIP1Q13794 54 aa11.95□□□□□ -0.5
ARFGAP1-209ENST00000518794 FBN1P35555 2871 aaKnown RBP11.95□□□□□ -0.5
ARFGAP1-209ENST00000518794 Q6ZRP5 223 aa11.95□□□□□ -0.5
ARFGAP1-209ENST00000518794 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
ARFGAP1-209ENST00000518794 CXCL6P80162 114 aa11.94□□□□□ -0.5
ARFGAP1-209ENST00000518794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.92□□□□□ -0.5
ARFGAP1-209ENST00000518794 EGFEM1PQ0D2K5 195 aa11.91□□□□□ -0.5
ARFGAP1-209ENST00000518794 F8P00451 2351 aa11.91□□□□□ -0.5
ARFGAP1-209ENST00000518794 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
ARFGAP1-209ENST00000518794 M0R378 163 aa11.9□□□□□ -0.5
ARFGAP1-209ENST00000518794 BPY2O14599 106 aa11.9□□□□□ -0.5
ARFGAP1-209ENST00000518794 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.518e-7■□□□□ 8.4
ARFGAP1-209ENST00000518794 DEFB105AQ8NG35 78 aa11.89□□□□□ -0.51
ARFGAP1-209ENST00000518794 Q8N9L7 120 aa11.89□□□□□ -0.51
ARFGAP1-209ENST00000518794 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
ARFGAP1-209ENST00000518794 PRYO14603 147 aa11.88□□□□□ -0.51
ARFGAP1-209ENST00000518794 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
ARFGAP1-209ENST00000518794 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
ARFGAP1-209ENST00000518794 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
ARFGAP1-209ENST00000518794 PDE6GP18545 87 aa11.84□□□□□ -0.51
ARFGAP1-209ENST00000518794 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
ARFGAP1-209ENST00000518794 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
ARFGAP1-209ENST00000518794 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
ARFGAP1-209ENST00000518794 RPL37AP8A6NKH3 93 aa11.83□□□□□ -0.52
ARFGAP1-209ENST00000518794 C3orf84H3BNL1 204 aa11.82□□□□□ -0.52
ARFGAP1-209ENST00000518794 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
ARFGAP1-209ENST00000518794 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
ARFGAP1-209ENST00000518794 ERC2-IT1O76042 136 aa11.81□□□□□ -0.52
ARFGAP1-209ENST00000518794 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
ARFGAP1-209ENST00000518794 H3BNG1 76 aa11.8□□□□□ -0.52
ARFGAP1-209ENST00000518794 NKAPP1Q8N9T2 125 aa11.8□□□□□ -0.52
ARFGAP1-209ENST00000518794 H3BQ85 93 aa11.79□□□□□ -0.52
ARFGAP1-209ENST00000518794 PRB2P02812 416 aaPredicted RBP11.79□□□□□ -0.52
ARFGAP1-209ENST00000518794 LINC01556Q5JQF7 62 aa11.79□□□□□ -0.52
ARFGAP1-209ENST00000518794 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
ARFGAP1-209ENST00000518794 OCR1Q9BZK8 76 aa11.79□□□□□ -0.52
ARFGAP1-209ENST00000518794 PSPHP1O15172 72 aa11.77□□□□□ -0.52
ARFGAP1-209ENST00000518794 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
ARFGAP1-209ENST00000518794 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
ARFGAP1-209ENST00000518794 hDV103S1A0JD37 113 aa11.76□□□□□ -0.53
ARFGAP1-209ENST00000518794 Q8N377 158 aa11.76□□□□□ -0.53
ARFGAP1-209ENST00000518794 IGKV4-1P06312 121 aa11.74□□□□□ -0.53
ARFGAP1-209ENST00000518794 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
ARFGAP1-209ENST00000518794 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
ARFGAP1-209ENST00000518794 Q9BRP9 147 aa11.71□□□□□ -0.53
ARFGAP1-209ENST00000518794 Q1T7F1 81 aa11.71□□□□□ -0.54
ARFGAP1-209ENST00000518794 C1orf64Q8NEQ6 169 aa11.71□□□□□ -0.54
ARFGAP1-209ENST00000518794 LYSTQ99698 3801 aa11.7□□□□□ -0.54
ARFGAP1-209ENST00000518794 A8MU10 97 aa11.7□□□□□ -0.54
ARFGAP1-209ENST00000518794 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
ARFGAP1-209ENST00000518794 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
ARFGAP1-209ENST00000518794 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
ARFGAP1-209ENST00000518794 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
ARFGAP1-209ENST00000518794 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
ARFGAP1-209ENST00000518794 CD164Q04900 197 aa11.68□□□□□ -0.54
ARFGAP1-209ENST00000518794 FAM30AQ9NZY2 134 aa11.68□□□□□ -0.54
ARFGAP1-209ENST00000518794 DNAH10OSP0CZ25 163 aa11.67□□□□□ -0.54
ARFGAP1-209ENST00000518794 CSMD3Q7Z407 3707 aa11.67□□□□□ -0.54
ARFGAP1-209ENST00000518794 TRAV22A0A0B4J277 110 aa11.66□□□□□ -0.54
ARFGAP1-209ENST00000518794 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
ARFGAP1-209ENST00000518794 Q6ZRX8 168 aa11.66□□□□□ -0.54
ARFGAP1-209ENST00000518794 A0A0G2JQZ4 141 aa11.65□□□□□ -0.54
ARFGAP1-209ENST00000518794 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
ARFGAP1-209ENST00000518794 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
ARFGAP1-209ENST00000518794 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
ARFGAP1-209ENST00000518794 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
ARFGAP1-209ENST00000518794 PRR4Q16378 134 aa11.63□□□□□ -0.55
ARFGAP1-209ENST00000518794 HUWE1Q7Z6Z7 4374 aaKnown RBP11.62□□□□□ -0.55
ARFGAP1-209ENST00000518794 KRTAP4-16G5E9R7 235 aaPredicted RBP11.62□□□□□ -0.55
ARFGAP1-209ENST00000518794 SMIM29Q86T20 159 aa11.61□□□□□ -0.55
ARFGAP1-209ENST00000518794 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
ARFGAP1-209ENST00000518794 A8MUN3 132 aa11.6□□□□□ -0.55
ARFGAP1-209ENST00000518794 SRRM2Q9UQ35 2752 aaKnown RBP11.6□□□□□ -0.55
ARFGAP1-209ENST00000518794 H3BS24 57 aa11.6□□□□□ -0.55
ARFGAP1-209ENST00000518794 C1orf137Q5JT78 98 aa11.6□□□□□ -0.55
ARFGAP1-209ENST00000518794 UBE2BP63146 152 aa11.59□□□□□ -0.55
ARFGAP1-209ENST00000518794 DHRS4-AS1Q9P1J3 65 aa11.59□□□□□ -0.55
ARFGAP1-209ENST00000518794 TLX1NBP0CAT3 122 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms