RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 F8WDY8 70 aa12.18□□□□□ -0.46
SDC2-202ENST00000518385 TRBV7-4A0A0J9YYF1 115 aa12.17□□□□□ -0.46
SDC2-202ENST00000518385 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
SDC2-202ENST00000518385 DNAH10OSP0CZ25 163 aa12.16□□□□□ -0.46
SDC2-202ENST00000518385 COX7BP24311 80 aa12.16□□□□□ -0.46
SDC2-202ENST00000518385 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
SDC2-202ENST00000518385 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
SDC2-202ENST00000518385 Q6ZQY7 126 aa12.15□□□□□ -0.46
SDC2-202ENST00000518385 ERC2-IT1O76042 136 aa12.14□□□□□ -0.47
SDC2-202ENST00000518385 C9orf116Q5BN46 136 aaPredicted RBP12.14□□□□□ -0.47
SDC2-202ENST00000518385 C20orf197Q8N268 126 aa12.14□□□□□ -0.47
SDC2-202ENST00000518385 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
SDC2-202ENST00000518385 Q8NDZ9 215 aa12.13□□□□□ -0.47
SDC2-202ENST00000518385 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
SDC2-202ENST00000518385 ZNF73O43830 326 aaPredicted RBP12.12□□□□□ -0.47
SDC2-202ENST00000518385 HAMPP81172 84 aa12.12□□□□□ -0.47
SDC2-202ENST00000518385 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
SDC2-202ENST00000518385 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
SDC2-202ENST00000518385 A0A1B0GW54 56 aa12.1□□□□□ -0.47
SDC2-202ENST00000518385 M0R378 163 aa12.1□□□□□ -0.47
SDC2-202ENST00000518385 C10orf25Q5T742 122 aa12.1□□□□□ -0.47
SDC2-202ENST00000518385 H7BZZ5 65 aa12.09□□□□□ -0.47
SDC2-202ENST00000518385 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
SDC2-202ENST00000518385 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
SDC2-202ENST00000518385 OXTP01178 125 aa12.06□□□□□ -0.48
SDC2-202ENST00000518385 Q5XG85 94 aa12.06□□□□□ -0.48
SDC2-202ENST00000518385 VPREB1P12018 145 aa12.04□□□□□ -0.48
SDC2-202ENST00000518385 RMI2Q96E14 147 aa12.04□□□□□ -0.48
SDC2-202ENST00000518385 IGKV2D-24A0A075B6R9 120 aa12.03□□□□□ -0.48
SDC2-202ENST00000518385 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
SDC2-202ENST00000518385 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
SDC2-202ENST00000518385 SMIM26A0A096LP01 95 aa12.01□□□□□ -0.49
SDC2-202ENST00000518385 NUPR2A6NF83 97 aa12.01□□□□□ -0.49
SDC2-202ENST00000518385 C15orf56Q8N910 161 aa12.01□□□□□ -0.49
SDC2-202ENST00000518385 LINC00528Q8N1L1 170 aa12.01□□□□□ -0.49
SDC2-202ENST00000518385 FBN3Q75N90 2809 aa11.99□□□□□ -0.49
SDC2-202ENST00000518385 M0R2N4 97 aa11.99□□□□□ -0.49
SDC2-202ENST00000518385 DYNC2H1Q8NCM8 4307 aaKnown RBP11.98□□□□□ -0.49
SDC2-202ENST00000518385 HIGD2BQ4VC39 106 aa11.96□□□□□ -0.49
SDC2-202ENST00000518385 DNAH7Q8WXX0 4024 aa11.96□□□□□ -0.5
SDC2-202ENST00000518385 NREPQ16612 68 aa11.96□□□□□ -0.5
SDC2-202ENST00000518385 C4orf26Q17RF5 130 aa11.94□□□□□ -0.5
SDC2-202ENST00000518385 XAGE1AQ9HD64 81 aa11.94□□□□□ -0.5
SDC2-202ENST00000518385 F8WEM9 126 aa11.93□□□□□ -0.5
SDC2-202ENST00000518385 BPY2O14599 106 aa11.93□□□□□ -0.5
SDC2-202ENST00000518385 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
SDC2-202ENST00000518385 Q6ZRU5 148 aa11.93□□□□□ -0.5
SDC2-202ENST00000518385 KCNQ1DNQ9H478 68 aa11.92□□□□□ -0.5
SDC2-202ENST00000518385 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
SDC2-202ENST00000518385 HRCT1Q6UXD1 115 aa11.91□□□□□ -0.5
SDC2-202ENST00000518385 TMEM254Q8TBM7 123 aa11.91□□□□□ -0.5
SDC2-202ENST00000518385 DHRS4-AS1Q9P1J3 65 aa11.9□□□□□ -0.5
SDC2-202ENST00000518385 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.5
SDC2-202ENST00000518385 IGLV5-48A0A075B6I7 105 aa11.89□□□□□ -0.51
SDC2-202ENST00000518385 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
SDC2-202ENST00000518385 TLX1NBP0CAT3 122 aa11.88□□□□□ -0.51
SDC2-202ENST00000518385 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
SDC2-202ENST00000518385 WWC2-AS2Q96NR7 200 aa11.88□□□□□ -0.51
SDC2-202ENST00000518385 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
SDC2-202ENST00000518385 OCR1Q9BZK8 76 aa11.86□□□□□ -0.51
SDC2-202ENST00000518385 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.515e-6■■□□□ 13.6
SDC2-202ENST00000518385 IGLV5-37A0A075B6J1 123 aa11.84□□□□□ -0.51
SDC2-202ENST00000518385 NKAPP1Q8N9T2 125 aa11.84□□□□□ -0.51
SDC2-202ENST00000518385 PRO0628Q9UI54 55 aa11.84□□□□□ -0.51
SDC2-202ENST00000518385 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
SDC2-202ENST00000518385 PRYO14603 147 aa11.84□□□□□ -0.51
SDC2-202ENST00000518385 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
SDC2-202ENST00000518385 PLECQ15149 4684 aaKnown RBP11.82□□□□□ -0.52
SDC2-202ENST00000518385 Q6ZRP5 223 aa11.82□□□□□ -0.52
SDC2-202ENST00000518385 SCXQ7RTU7 201 aa11.82□□□□□ -0.52
SDC2-202ENST00000518385 TGP01266 2768 aa11.8□□□□□ -0.52
SDC2-202ENST00000518385 LCE6AA0A183 80 aa11.78□□□□□ -0.52
SDC2-202ENST00000518385 CASC10Q5T4H9 136 aa11.78□□□□□ -0.52
SDC2-202ENST00000518385 Q8N377 158 aa11.77□□□□□ -0.53
SDC2-202ENST00000518385 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
SDC2-202ENST00000518385 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
SDC2-202ENST00000518385 C3orf84H3BNL1 204 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 SPRR1AP35321 89 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 Q6ZRX8 168 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
SDC2-202ENST00000518385 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 TNP2Q05952 138 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 TENM2Q9NT68 2774 aa11.75□□□□□ -0.53
SDC2-202ENST00000518385 LYSTQ99698 3801 aa11.74□□□□□ -0.53
SDC2-202ENST00000518385 Q8NBF4 154 aa11.74□□□□□ -0.53
SDC2-202ENST00000518385 SPRR4Q96PI1 79 aa11.74□□□□□ -0.53
SDC2-202ENST00000518385 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
SDC2-202ENST00000518385 PSCAO43653 123 aa11.73□□□□□ -0.53
SDC2-202ENST00000518385 CNBPP62633 177 aaKnown RBP11.72□□□□□ -0.53
SDC2-202ENST00000518385 ETDCA0A1B0GVM5 59 aa11.71□□□□□ -0.54
SDC2-202ENST00000518385 KRTAP4-16G5E9R7 235 aaPredicted RBP11.71□□□□□ -0.54
SDC2-202ENST00000518385 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
SDC2-202ENST00000518385 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
SDC2-202ENST00000518385 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
SDC2-202ENST00000518385 VPS13DQ5THJ4 4388 aa11.69□□□□□ -0.54
SDC2-202ENST00000518385 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
SDC2-202ENST00000518385 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
SDC2-202ENST00000518385 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
SDC2-202ENST00000518385 SERTAD4-AS1Q5TG53 156 aa11.66□□□□□ -0.54
SDC2-202ENST00000518385 Q8N9L7 120 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms