RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
TRAPPC9-203ENST00000517667 SMIM1B2RUZ4 78 aa6.56□□□□□ -1.36
TRAPPC9-203ENST00000517667 Q6ZVH6 145 aa6.56□□□□□ -1.36
TRAPPC9-203ENST00000517667 BATFQ16520 125 aa6.55□□□□□ -1.36
TRAPPC9-203ENST00000517667 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
TRAPPC9-203ENST00000517667 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
TRAPPC9-203ENST00000517667 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
TRAPPC9-203ENST00000517667 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC9-203ENST00000517667 TIMM17BO60830 172 aa6.54□□□□□ -1.36
TRAPPC9-203ENST00000517667 C2orf91Q6ZV80 131 aa6.54□□□□□ -1.36
TRAPPC9-203ENST00000517667 NKAPP1Q8N9T2 125 aa6.54□□□□□ -1.36
TRAPPC9-203ENST00000517667 IGLV5-37A0A075B6J1 123 aa6.53□□□□□ -1.36
TRAPPC9-203ENST00000517667 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
TRAPPC9-203ENST00000517667 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC9-203ENST00000517667 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
TRAPPC9-203ENST00000517667 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
TRAPPC9-203ENST00000517667 IFITM1P13164 125 aa6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 TSPEAR-AS2P59090 65 aa6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 CEND1Q8N111 149 aa6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
TRAPPC9-203ENST00000517667 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
TRAPPC9-203ENST00000517667 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
TRAPPC9-203ENST00000517667 SNHG12Q9BXW3 62 aa6.51□□□□□ -1.37
TRAPPC9-203ENST00000517667 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
TRAPPC9-203ENST00000517667 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
TRAPPC9-203ENST00000517667 PRLHP81277 87 aa6.5□□□□□ -1.37
TRAPPC9-203ENST00000517667 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
TRAPPC9-203ENST00000517667 SPANXCQ9NY87 97 aa6.5□□□□□ -1.37
TRAPPC9-203ENST00000517667 C4orf48Q5BLP8 95 aa6.49□□□□□ -1.37
TRAPPC9-203ENST00000517667 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
TRAPPC9-203ENST00000517667 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
TRAPPC9-203ENST00000517667 COX17Q14061 63 aa6.48□□□□□ -1.37
TRAPPC9-203ENST00000517667 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC9-203ENST00000517667 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
TRAPPC9-203ENST00000517667 SMIM13P0DJ93 91 aa6.47□□□□□ -1.37
TRAPPC9-203ENST00000517667 TMEM126AQ9H061 195 aa6.47□□□□□ -1.37
TRAPPC9-203ENST00000517667 LINC00158P58513 81 aa6.46□□□□□ -1.38
TRAPPC9-203ENST00000517667 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.38
TRAPPC9-203ENST00000517667 NHP2Q9NX24 153 aaKnown RBP6.46□□□□□ -1.38
TRAPPC9-203ENST00000517667 RAB37Q96AX2 223 aa6.45□□□□□ -1.38
TRAPPC9-203ENST00000517667 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
TRAPPC9-203ENST00000517667 CFC1BP0CG36 223 aa6.44□□□□□ -1.38
TRAPPC9-203ENST00000517667 FXYD2P54710 66 aa6.44□□□□□ -1.38
TRAPPC9-203ENST00000517667 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC9-203ENST00000517667 SPINK1P00995 79 aa6.43□□□□□ -1.38
TRAPPC9-203ENST00000517667 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
TRAPPC9-203ENST00000517667 DAND5Q8N907 189 aa6.43□□□□□ -1.38
TRAPPC9-203ENST00000517667 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 M0R378 163 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 Q8NBF4 154 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 SPRR4Q96PI1 79 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 LITAFQ99732 161 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 HIGD2AQ9BW72 106 aa6.42□□□□□ -1.38
TRAPPC9-203ENST00000517667 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 A4D1N5 150 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 PFN2P35080 140 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 LINC00308Q8TCZ7 52 aa6.41□□□□□ -1.38
TRAPPC9-203ENST00000517667 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.38
TRAPPC9-203ENST00000517667 A0A0U1RRA0 63 aa6.4□□□□□ -1.38
TRAPPC9-203ENST00000517667 VPREB1P12018 145 aa6.4□□□□□ -1.38
TRAPPC9-203ENST00000517667 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.38
TRAPPC9-203ENST00000517667 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 FABP2P12104 132 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 Q1RN00 199 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 XP32Q5T750 250 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 CBY1Q9Y3M2 126 aa6.39□□□□□ -1.39
TRAPPC9-203ENST00000517667 TAX1BP3O14907 124 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 COX6CP09669 75 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 NPC2P61916 151 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 MT1HP80294 61 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
TRAPPC9-203ENST00000517667 NDUFC2O95298 119 aa6.37□□□□□ -1.39
TRAPPC9-203ENST00000517667 CFC1P0CG37 223 aa6.37□□□□□ -1.39
TRAPPC9-203ENST00000517667 PSMB2P49721 201 aa6.37□□□□□ -1.39
TRAPPC9-203ENST00000517667 VAMP3Q15836 100 aa6.37□□□□□ -1.39
TRAPPC9-203ENST00000517667 LOC107984156A0A0G2JMH3 177 aa6.36□□□□□ -1.39
TRAPPC9-203ENST00000517667 H3BUT2 72 aa6.36□□□□□ -1.39
TRAPPC9-203ENST00000517667 ARL17AQ8IVW1 177 aa6.36□□□□□ -1.39
TRAPPC9-203ENST00000517667 A0A1B0GV90 55 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 A0A1W2PPM0 123 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 K7ERJ3 54 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 SLC25A20O43772 301 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 Q8N377 158 aa6.35□□□□□ -1.39
TRAPPC9-203ENST00000517667 TRBV20-1A0A075B6N2 111 aa6.34□□□□□ -1.39
TRAPPC9-203ENST00000517667 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
TRAPPC9-203ENST00000517667 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC9-203ENST00000517667 TRBV10-2A0A0K0K1G8 114 aa6.32□□□□□ -1.4
TRAPPC9-203ENST00000517667 SNCGO76070 127 aa6.32□□□□□ -1.4
TRAPPC9-203ENST00000517667 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms