RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 IGLC2P0DOY2 106 aa2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 IGLC3P0DOY3 106 aa2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 RPS27P42677 84 aaKnown RBP2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 TTTY10Q9BZA0 68 aa2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 ABRACLQ9P1F3 81 aa2.09□□□□□ -2.07
CTNNA1-202ENST00000517533 PRRC2CQ9Y520 2896 aaKnown RBP2.09□□□□□ -2.08
CTNNA1-202ENST00000517533 CEP295Q9C0D2 2601 aa2.09□□□□□ -2.08
CTNNA1-202ENST00000517533 ZFHX3Q15911 3703 aa2.09□□□□□ -2.08
CTNNA1-202ENST00000517533 AKAP13Q12802 2813 aa2.09□□□□□ -2.08
CTNNA1-202ENST00000517533 KANTRA0A1W2PQU2 76 aa2.08□□□□□ -2.08
CTNNA1-202ENST00000517533 IQCF6A8MYZ5 107 aa2.08□□□□□ -2.08
CTNNA1-202ENST00000517533 LINC00643Q86TS7 51 aa2.08□□□□□ -2.08
CTNNA1-202ENST00000517533 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
CTNNA1-202ENST00000517533 PIEZO1Q92508 2521 aa2.08□□□□□ -2.08
CTNNA1-202ENST00000517533 SPTBN4Q9H254 2564 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 FREM2Q5SZK8 3169 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 H3BSH0 61 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 PIN1P1O15428 100 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 LEPROTL1O95214 131 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 GCHFRP30047 84 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 ACACAQ13085 2346 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 SPTBN2O15020 2390 aa2.07□□□□□ -2.08
CTNNA1-202ENST00000517533 ANKRD11Q6UB99 2663 aaPredicted RBP2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 K7EIL1 84 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 Q6ZSA8 131 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 TOMM5Q8N4H5 51 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 PIEZO2Q9H5I5 2752 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 DMXL2Q8TDJ6 3036 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 APC2O95996 2303 aa2.06□□□□□ -2.08
CTNNA1-202ENST00000517533 MGAQ8IWI9 3026 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 DNAJC13O75165 2243 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 CACNA1CQ13936 2221 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 SORL1Q92673 2214 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 MAP1BP46821 2468 aaKnown RBP2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 HMGN3Q15651 99 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 FRYQ5TBA9 3013 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 CFAP47Q6ZTR5 3102 aa2.05□□□□□ -2.08
CTNNA1-202ENST00000517533 DSPP15924 2871 aaKnown RBP2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 ASPMQ8IZT6 3477 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 D6R8Y8 96 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 LOC400499M0QZD8 3231 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 CFDP00746 253 aaPredicted RBP2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 ACYP1P07311 99 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 ZFHX4Q86UP3 3567 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 CHD8Q9HCK8 2581 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 LINC00846Q9NV44 126 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 CELSR3Q9NYQ7 3312 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 BOD1L1Q8NFC6 3051 aa2.04□□□□□ -2.08
CTNNA1-202ENST00000517533 CACNA1AO00555 2505 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 NCOR2Q9Y618 2525 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 IGF2RP11717 2491 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 RP1L1Q8IWN7 2480 aaPredicted RBP2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 PTPRQQ9UMZ3 2332 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 LAMA5O15230 3695 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 DCHS1Q96JQ0 3298 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 MYMXA0A1B0GTQ4 84 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 ARHGAP5-AS1Q96IT6 56 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 TLN1Q9Y490 2541 aaKnown RBP2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 ATMQ13315 3056 aa2.03□□□□□ -2.08
CTNNA1-202ENST00000517533 ITPR1Q14643 2758 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 SNRPGP15A8MWD9 76 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 PIGYQ3MUY2 71 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 Q6JHZ5 121 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 C6orf201Q7Z4U5 140 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 TMEM263Q8WUH6 116 aaKnown RBP2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 PLAC8Q9NZF1 115 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 SPTA1P02549 2419 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 ZZEF1O43149 2961 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 NBEAQ8NFP9 2946 aa2.02□□□□□ -2.09
CTNNA1-202ENST00000517533 TPRP12270 2363 aaKnown RBP2.01□□□□□ -2.09
CTNNA1-202ENST00000517533 SPINK7P58062 85 aa2.01□□□□□ -2.09
CTNNA1-202ENST00000517533 HAMPP81172 84 aa2.01□□□□□ -2.09
CTNNA1-202ENST00000517533 DEFA5Q01523 94 aa2.01□□□□□ -2.09
CTNNA1-202ENST00000517533 ACACBO00763 2458 aa2.01□□□□□ -2.09
CTNNA1-202ENST00000517533 PKD1L2Q7Z442 2459 aa2□□□□□ -2.09
CTNNA1-202ENST00000517533 KALRNO60229 2985 aa2□□□□□ -2.09
CTNNA1-202ENST00000517533 TFF3Q07654 80 aa2□□□□□ -2.09
CTNNA1-202ENST00000517533 PLGLAQ15195 96 aa2□□□□□ -2.09
CTNNA1-202ENST00000517533 IGSF10Q6WRI0 2623 aa2□□□□□ -2.09
CTNNA1-202ENST00000517533 DEFB108AA8MXU0 73 aa1.99□□□□□ -2.09
CTNNA1-202ENST00000517533 ANGP03950 147 aaKnown RBP1.99□□□□□ -2.09
CTNNA1-202ENST00000517533 DEFB108BQ8NET1 73 aa1.99□□□□□ -2.09
CTNNA1-202ENST00000517533 C18orf32Q8TCD1 76 aa1.99□□□□□ -2.09
CTNNA1-202ENST00000517533 KAAG1Q9UBP8 84 aa1.99□□□□□ -2.09
CTNNA1-202ENST00000517533 COL6A6A6NMZ7 2263 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 H0Y9P7 68 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 COX6B1P14854 86 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 GAFA1Q96PS6 74 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 PCNX1Q96RV3 2341 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 CFAP46Q8IYW2 2715 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 NBASA2RRP1 2371 aa1.98□□□□□ -2.09
CTNNA1-202ENST00000517533 ANKHD1Q8IWZ3 2542 aaKnown RBP1.97□□□□□ -2.09
CTNNA1-202ENST00000517533 USP24Q9UPU5 2620 aa1.97□□□□□ -2.09
CTNNA1-202ENST00000517533 CADP27708 2225 aa1.97□□□□□ -2.09
CTNNA1-202ENST00000517533 MYO18BQ8IUG5 2567 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms