RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
PABPC1-202ENST00000517403 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
PABPC1-202ENST00000517403 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
PABPC1-202ENST00000517403 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
PABPC1-202ENST00000517403 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
PABPC1-202ENST00000517403 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
PABPC1-202ENST00000517403 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
PABPC1-202ENST00000517403 SERF1AO75920 110 aa4.82□□□□□ -1.64
PABPC1-202ENST00000517403 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
PABPC1-202ENST00000517403 SEC61GP60059 68 aa4.81□□□□□ -1.64
PABPC1-202ENST00000517403 MOBPQ13875 183 aa4.81□□□□□ -1.64
PABPC1-202ENST00000517403 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
PABPC1-202ENST00000517403 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
PABPC1-202ENST00000517403 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
PABPC1-202ENST00000517403 NDUFA12Q9UI09 145 aa4.81□□□□□ -1.64
PABPC1-202ENST00000517403 TRGC2P03986 189 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 ADAMTSL4-AS1Q5T5F5 129 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 Q8N377 158 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
PABPC1-202ENST00000517403 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
PABPC1-202ENST00000517403 PCP4L1A6NKN8 68 aa4.79□□□□□ -1.64
PABPC1-202ENST00000517403 SNAPINO95295 136 aa4.79□□□□□ -1.64
PABPC1-202ENST00000517403 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
PABPC1-202ENST00000517403 SVBPQ8N300 66 aa4.79□□□□□ -1.64
PABPC1-202ENST00000517403 NPC2P61916 151 aa4.78□□□□□ -1.64
PABPC1-202ENST00000517403 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
PABPC1-202ENST00000517403 LITAFQ99732 161 aa4.78□□□□□ -1.64
PABPC1-202ENST00000517403 LEPROTO15243 131 aa4.77□□□□□ -1.65
PABPC1-202ENST00000517403 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
PABPC1-202ENST00000517403 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
PABPC1-202ENST00000517403 Q6ZRX8 168 aa4.77□□□□□ -1.65
PABPC1-202ENST00000517403 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
PABPC1-202ENST00000517403 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
PABPC1-202ENST00000517403 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
PABPC1-202ENST00000517403 J3QQQ9 107 aa4.76□□□□□ -1.65
PABPC1-202ENST00000517403 HSBP1O75506 76 aa4.76□□□□□ -1.65
PABPC1-202ENST00000517403 DDTP30046 118 aa4.76□□□□□ -1.65
PABPC1-202ENST00000517403 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
PABPC1-202ENST00000517403 COLCA2A8K830 154 aa4.75□□□□□ -1.65
PABPC1-202ENST00000517403 FABP4P15090 132 aa4.75□□□□□ -1.65
PABPC1-202ENST00000517403 CTAG1AP78358 180 aa4.75□□□□□ -1.65
PABPC1-202ENST00000517403 SPAG11AQ6PDA7 123 aa4.75□□□□□ -1.65
PABPC1-202ENST00000517403 SLC7A5P1Q8MH63 180 aa4.75□□□□□ -1.65
PABPC1-202ENST00000517403 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
PABPC1-202ENST00000517403 MYMXA0A1B0GTQ4 84 aa4.74□□□□□ -1.65
PABPC1-202ENST00000517403 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
PABPC1-202ENST00000517403 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
PABPC1-202ENST00000517403 ZNF706Q9Y5V0 76 aaPredicted RBP4.74□□□□□ -1.65
PABPC1-202ENST00000517403 A0A0G2JQZ4 141 aa4.73□□□□□ -1.65
PABPC1-202ENST00000517403 TRBV10-2A0A0K0K1G8 114 aa4.73□□□□□ -1.65
PABPC1-202ENST00000517403 SPINK1P00995 79 aa4.73□□□□□ -1.65
PABPC1-202ENST00000517403 SPANXB1Q9NS25 103 aaPredicted RBP4.73□□□□□ -1.65
PABPC1-202ENST00000517403 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
PABPC1-202ENST00000517403 DPM2O94777 84 aa4.72□□□□□ -1.65
PABPC1-202ENST00000517403 NDUFC2O95298 119 aa4.71□□□□□ -1.66
PABPC1-202ENST00000517403 IGKCP01834 107 aa4.71□□□□□ -1.66
PABPC1-202ENST00000517403 PLNP26678 52 aa4.71□□□□□ -1.66
PABPC1-202ENST00000517403 MT1HP80294 61 aa4.71□□□□□ -1.66
PABPC1-202ENST00000517403 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
PABPC1-202ENST00000517403 E9PLD3 99 aa4.7□□□□□ -1.66
PABPC1-202ENST00000517403 ZNF73O43830 326 aaPredicted RBP4.7□□□□□ -1.66
PABPC1-202ENST00000517403 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BKO60814 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BJP06899 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
PABPC1-202ENST00000517403 SPRR1BP22528 89 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BOP23527 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BBP33778 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BDP58876 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BCP62807 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST2H2BEQ16778 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HRCT1Q6UXD1 115 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BHQ93079 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BNQ99877 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 HIST1H2BMQ99879 126 aa4.69□□□□□ -1.66
PABPC1-202ENST00000517403 C9orf153Q5TBE3 101 aa4.68□□□□□ -1.66
PABPC1-202ENST00000517403 MAP1LC3CQ9BXW4 147 aa4.68□□□□□ -1.66
PABPC1-202ENST00000517403 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 NMUP48645 174 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 S100A7L2Q5SY68 101 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
PABPC1-202ENST00000517403 SLC25A20O43772 301 aa4.66□□□□□ -1.66
PABPC1-202ENST00000517403 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
PABPC1-202ENST00000517403 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
PABPC1-202ENST00000517403 IGKV2-30P06310 120 aa4.65□□□□□ -1.67
PABPC1-202ENST00000517403 C3orf79P0CE67 100 aa4.65□□□□□ -1.67
PABPC1-202ENST00000517403 ELOF1P60002 83 aaKnown RBP4.65□□□□□ -1.67
PABPC1-202ENST00000517403 HERVK_113P61574 105 aa4.65□□□□□ -1.67
PABPC1-202ENST00000517403 Q1RN00 199 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms