RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PKD1L3Q7Z443 1732 aa-2.95□□□□□ -2.88
RNU6-1088P-201ENST00000516850 DYNC1H1Q14204 4646 aaKnown RBP-2.96□□□□□ -2.88
RNU6-1088P-201ENST00000516850 NDUFA3O95167 84 aa-2.96□□□□□ -2.88
RNU6-1088P-201ENST00000516850 ASIPP42127 132 aa-2.96□□□□□ -2.88
RNU6-1088P-201ENST00000516850 SVBPQ8N300 66 aa-2.96□□□□□ -2.88
RNU6-1088P-201ENST00000516850 CEP290O15078 2479 aa-2.97□□□□□ -2.88
RNU6-1088P-201ENST00000516850 SNAPC5O75971 98 aa-2.97□□□□□ -2.88
RNU6-1088P-201ENST00000516850 MYOM2P54296 1465 aa-2.97□□□□□ -2.89
RNU6-1088P-201ENST00000516850 PMCHL1Q16048 86 aa-2.98□□□□□ -2.89
RNU6-1088P-201ENST00000516850 RGPD3A6NKT7 1758 aaPredicted RBP-2.98□□□□□ -2.89
RNU6-1088P-201ENST00000516850 RGPD4Q7Z3J3 1758 aa-2.98□□□□□ -2.89
RNU6-1088P-201ENST00000516850 CC2D2AQ9P2K1 1620 aa-2.99□□□□□ -2.89
RNU6-1088P-201ENST00000516850 CCDC58Q4VC31 144 aa-2.99□□□□□ -2.89
RNU6-1088P-201ENST00000516850 FRYQ5TBA9 3013 aa-2.99□□□□□ -2.89
RNU6-1088P-201ENST00000516850 SCN11AQ9UI33 1791 aa-3□□□□□ -2.89
RNU6-1088P-201ENST00000516850 TNRC6CQ9HCJ0 1690 aaKnown RBP-3□□□□□ -2.89
RNU6-1088P-201ENST00000516850 H3BQ15 152 aa-3□□□□□ -2.89
RNU6-1088P-201ENST00000516850 NRKQ7Z2Y5 1582 aa-3□□□□□ -2.89
RNU6-1088P-201ENST00000516850 CRYBG1Q9Y4K1 1723 aa-3.01□□□□□ -2.89
RNU6-1088P-201ENST00000516850 FAM135AQ9P2D6 1515 aa-3.01□□□□□ -2.89
RNU6-1088P-201ENST00000516850 TRBV25-1A0A075B6N4 114 aa-3.01□□□□□ -2.89
RNU6-1088P-201ENST00000516850 CACFD1Q9UGQ2 172 aa-3.01□□□□□ -2.89
RNU6-1088P-201ENST00000516850 COL12A1Q99715 3063 aa-3.01□□□□□ -2.89
RNU6-1088P-201ENST00000516850 ABCA3Q99758 1704 aa-3.02□□□□□ -2.89
RNU6-1088P-201ENST00000516850 ABCC2Q92887 1545 aa-3.02□□□□□ -2.89
RNU6-1088P-201ENST00000516850 RPL38P63173 70 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1088P-201ENST00000516850 SPHKAPQ2M3C7 1700 aa-3.02□□□□□ -2.89
RNU6-1088P-201ENST00000516850 RANBP2P49792 3224 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1088P-201ENST00000516850 MAGI2Q86UL8 1455 aa-3.03□□□□□ -2.9
RNU6-1088P-201ENST00000516850 TIAM2Q8IVF5 1701 aa-3.04□□□□□ -2.9
RNU6-1088P-201ENST00000516850 PRLHP81277 87 aa-3.04□□□□□ -2.9
RNU6-1088P-201ENST00000516850 NALCNQ8IZF0 1738 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 LOC105371267A0A1B0GV96 52 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 TMEM218A2RU14 115 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 KRTAP19-5Q3LI72 72 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 IER3IP1Q9Y5U9 82 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 LRRC9Q6ZRR7 1453 aa-3.05□□□□□ -2.9
RNU6-1088P-201ENST00000516850 hADV29S1A0JD25 119 aa-3.06□□□□□ -2.9
RNU6-1088P-201ENST00000516850 IGLC2P0DOY2 106 aa-3.06□□□□□ -2.9
RNU6-1088P-201ENST00000516850 IGLC3P0DOY3 106 aa-3.06□□□□□ -2.9
RNU6-1088P-201ENST00000516850 COX7BP24311 80 aa-3.06□□□□□ -2.9
RNU6-1088P-201ENST00000516850 UBE2D4Q9Y2X8 147 aa-3.06□□□□□ -2.9
RNU6-1088P-201ENST00000516850 NDUFC1O43677 76 aa-3.07□□□□□ -2.9
RNU6-1088P-201ENST00000516850 NDUFA2O43678 99 aa-3.07□□□□□ -2.9
RNU6-1088P-201ENST00000516850 UQCRHP07919 91 aa-3.07□□□□□ -2.9
RNU6-1088P-201ENST00000516850 TSC22D3Q99576 134 aa-3.07□□□□□ -2.9
RNU6-1088P-201ENST00000516850 C5orf42Q9H799 3197 aa-3.07□□□□□ -2.9
RNU6-1088P-201ENST00000516850 PLXNC1O60486 1568 aa-3.08□□□□□ -2.9
RNU6-1088P-201ENST00000516850 MLH3Q9UHC1 1453 aa-3.08□□□□□ -2.9
RNU6-1088P-201ENST00000516850 MT1XP80297 61 aa-3.09□□□□□ -2.9
RNU6-1088P-201ENST00000516850 C3orf79P0CE67 100 aa-3.1□□□□□ -2.91
RNU6-1088P-201ENST00000516850 RAPGEF2Q9Y4G8 1499 aa-3.1□□□□□ -2.91
RNU6-1088P-201ENST00000516850 SRCAPQ6ZRS2 3230 aa-3.11□□□□□ -2.91
RNU6-1088P-201ENST00000516850 MPC2O95563 127 aa-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 GNG4P50150 75 aa-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 PPP3R1P63098 170 aa-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 ALKAL2Q6UX46 152 aa-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 PRO3102Q9H379 93 aa-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 ROCK2O75116 1388 aaKnown RBP-3.12□□□□□ -2.91
RNU6-1088P-201ENST00000516850 D6R8Y8 96 aa-3.13□□□□□ -2.91
RNU6-1088P-201ENST00000516850 MUSTN1Q8IVN3 82 aa-3.13□□□□□ -2.91
RNU6-1088P-201ENST00000516850 TRGV9Q99603 122 aa-3.13□□□□□ -2.91
RNU6-1088P-201ENST00000516850 USP32Q8NFA0 1604 aa-3.13□□□□□ -2.91
RNU6-1088P-201ENST00000516850 TLN2Q9Y4G6 2542 aa-3.14□□□□□ -2.91
RNU6-1088P-201ENST00000516850 HMGN3Q15651 99 aa-3.14□□□□□ -2.91
RNU6-1088P-201ENST00000516850 LINC00158P58513 81 aa-3.15□□□□□ -2.91
RNU6-1088P-201ENST00000516850 LEPROTL1O95214 131 aa-3.16□□□□□ -2.92
RNU6-1088P-201ENST00000516850 MYH4Q9Y623 1939 aa-3.17□□□□□ -2.92
RNU6-1088P-201ENST00000516850 LRRC7Q96NW7 1537 aa-3.18□□□□□ -2.92
RNU6-1088P-201ENST00000516850 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.18□□□□□ -2.92
RNU6-1088P-201ENST00000516850 ETDBQ3ZM63 59 aa-3.18□□□□□ -2.92
RNU6-1088P-201ENST00000516850 SUPT6HQ7KZ85 1726 aaKnown RBP-3.19□□□□□ -2.92
RNU6-1088P-201ENST00000516850 CHD7Q9P2D1 2997 aa-3.19□□□□□ -2.92
RNU6-1088P-201ENST00000516850 UNC13AQ9UPW8 1703 aa-3.19□□□□□ -2.92
RNU6-1088P-201ENST00000516850 ITPR1Q14643 2758 aa-3.2□□□□□ -2.92
RNU6-1088P-201ENST00000516850 ZNF720Q7Z2F6 126 aa-3.2□□□□□ -2.92
RNU6-1088P-201ENST00000516850 NESP48681 1621 aa-3.2□□□□□ -2.92
RNU6-1088P-201ENST00000516850 SPENQ96T58 3664 aaKnown RBP-3.2□□□□□ -2.92
RNU6-1088P-201ENST00000516850 PZPP20742 1482 aa-3.22□□□□□ -2.92
RNU6-1088P-201ENST00000516850 GNGT2O14610 69 aa-3.22□□□□□ -2.92
RNU6-1088P-201ENST00000516850 FAM107BQ9H098 131 aa-3.22□□□□□ -2.92
RNU6-1088P-201ENST00000516850 EIF4G3O43432 1585 aaKnown RBP-3.22□□□□□ -2.93
RNU6-1088P-201ENST00000516850 NRXN1Q9ULB1 1477 aa-3.22□□□□□ -2.93
RNU6-1088P-201ENST00000516850 DEPDC5O75140 1603 aa-3.22□□□□□ -2.93
RNU6-1088P-201ENST00000516850 MAGI3Q5TCQ9 1506 aa-3.23□□□□□ -2.93
RNU6-1088P-201ENST00000516850 WIZO95785 1651 aa-3.23□□□□□ -2.93
RNU6-1088P-201ENST00000516850 RGPD1P0DJD0 1748 aa-3.23□□□□□ -2.93
RNU6-1088P-201ENST00000516850 GAFA1Q96PS6 74 aa-3.23□□□□□ -2.93
RNU6-1088P-201ENST00000516850 SPTBN5Q9NRC6 3674 aaKnown RBP-3.23□□□□□ -2.93
RNU6-1088P-201ENST00000516850 PRDM15P57071 1507 aaPredicted RBP-3.24□□□□□ -2.93
RNU6-1088P-201ENST00000516850 MT1HL1P0DM35 61 aa-3.24□□□□□ -2.93
RNU6-1088P-201ENST00000516850 SERP2Q8N6R1 65 aa-3.24□□□□□ -2.93
RNU6-1088P-201ENST00000516850 ANKRD36BQ8N2N9 1353 aa-3.25□□□□□ -2.93
RNU6-1088P-201ENST00000516850 F8WEM9 126 aa-3.25□□□□□ -2.93
RNU6-1088P-201ENST00000516850 S100A1P23297 94 aa-3.25□□□□□ -2.93
RNU6-1088P-201ENST00000516850 CLTCQ00610 1675 aaKnown RBP-3.25□□□□□ -2.93
RNU6-1088P-201ENST00000516850 ABCA13Q86UQ4 5058 aa-3.26□□□□□ -2.93
RNU6-1088P-201ENST00000516850 CSMD1Q96PZ7 3565 aa-3.26□□□□□ -2.93
RNU6-1088P-201ENST00000516850 CORTO00230 105 aa-3.26□□□□□ -2.93
RNU6-1088P-201ENST00000516850 DEFB106AQ8N104 65 aa-3.26□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms