RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 NMUP48645 174 aa6.56□□□□□ -1.36
UBE2D3-232ENST00000514755 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
UBE2D3-232ENST00000514755 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
UBE2D3-232ENST00000514755 UBE2AP49459 152 aa6.55□□□□□ -1.36
UBE2D3-232ENST00000514755 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
UBE2D3-232ENST00000514755 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
UBE2D3-232ENST00000514755 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
UBE2D3-232ENST00000514755 A0A087X002 238 aa6.54□□□□□ -1.36
UBE2D3-232ENST00000514755 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
UBE2D3-232ENST00000514755 NPC2P61916 151 aa6.54□□□□□ -1.36
UBE2D3-232ENST00000514755 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
UBE2D3-232ENST00000514755 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
UBE2D3-232ENST00000514755 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
UBE2D3-232ENST00000514755 LITAFQ99732 161 aa6.53□□□□□ -1.36
UBE2D3-232ENST00000514755 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
UBE2D3-232ENST00000514755 SPRR1AP35321 89 aa6.51□□□□□ -1.37
UBE2D3-232ENST00000514755 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
UBE2D3-232ENST00000514755 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
UBE2D3-232ENST00000514755 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-232ENST00000514755 HIST1H2BLQ99880 126 aa6.5□□□□□ -1.37
UBE2D3-232ENST00000514755 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
UBE2D3-232ENST00000514755 LRP2P98164 4655 aa6.5□□□□□ -1.37
UBE2D3-232ENST00000514755 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
UBE2D3-232ENST00000514755 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
UBE2D3-232ENST00000514755 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
UBE2D3-232ENST00000514755 LPAP08519 4548 aa6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 C20orf202A1L168 122 aa6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 NDUFC2O95298 119 aa6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 DDTP30046 118 aa6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 RPL13AP40429 203 aaKnown RBP6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
UBE2D3-232ENST00000514755 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
UBE2D3-232ENST00000514755 CRYGAP11844 174 aa6.47□□□□□ -1.37
UBE2D3-232ENST00000514755 LINC00337Q8N6G1 96 aa6.47□□□□□ -1.37
UBE2D3-232ENST00000514755 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-232ENST00000514755 TIMM17BO60830 172 aa6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 IGLV6-57P01721 117 aa6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 S100A2P29034 98 aa6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
UBE2D3-232ENST00000514755 S100A6P06703 90 aa6.45□□□□□ -1.38
UBE2D3-232ENST00000514755 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
UBE2D3-232ENST00000514755 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 C3orf22Q8N5N4 141 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
UBE2D3-232ENST00000514755 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
UBE2D3-232ENST00000514755 TSPAN13O95857 204 aa6.43□□□□□ -1.38
UBE2D3-232ENST00000514755 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
UBE2D3-232ENST00000514755 Q9BRP9 147 aa6.43□□□□□ -1.38
UBE2D3-232ENST00000514755 SPANXCQ9NY87 97 aa6.43□□□□□ -1.38
UBE2D3-232ENST00000514755 C5orf52A6NGY3 159 aa6.42□□□□□ -1.38
UBE2D3-232ENST00000514755 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
UBE2D3-232ENST00000514755 S100A12P80511 92 aa6.41□□□□□ -1.38
UBE2D3-232ENST00000514755 Q6ZRX8 168 aa6.41□□□□□ -1.38
UBE2D3-232ENST00000514755 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
UBE2D3-232ENST00000514755 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
UBE2D3-232ENST00000514755 OR13C6PQ8NH95 151 aa6.4□□□□□ -1.38
UBE2D3-232ENST00000514755 AKR1D1P51857 326 aa6.39□□□□□ -1.39
UBE2D3-232ENST00000514755 MUSTN1Q8IVN3 82 aa6.39□□□□□ -1.39
UBE2D3-232ENST00000514755 GAGE2AQ6NT46 116 aa6.38□□□□□ -1.39
UBE2D3-232ENST00000514755 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
UBE2D3-232ENST00000514755 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-232ENST00000514755 SCGB1D1O95968 90 aa6.37□□□□□ -1.39
UBE2D3-232ENST00000514755 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
UBE2D3-232ENST00000514755 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
UBE2D3-232ENST00000514755 IFITM1P13164 125 aa6.36□□□□□ -1.39
UBE2D3-232ENST00000514755 PRR4Q16378 134 aa6.36□□□□□ -1.39
UBE2D3-232ENST00000514755 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
UBE2D3-232ENST00000514755 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
UBE2D3-232ENST00000514755 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
UBE2D3-232ENST00000514755 C6orf99Q4VX62 202 aa6.35□□□□□ -1.39
UBE2D3-232ENST00000514755 Q6ZVH6 145 aa6.35□□□□□ -1.39
UBE2D3-232ENST00000514755 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
UBE2D3-232ENST00000514755 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-232ENST00000514755 IGLV9-49A0A0B4J1Y8 123 aa6.33□□□□□ -1.4
UBE2D3-232ENST00000514755 Q8NBF4 154 aa6.33□□□□□ -1.4
UBE2D3-232ENST00000514755 A6NDN8 102 aa6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 MOBPQ13875 183 aa6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
UBE2D3-232ENST00000514755 COX7BP24311 80 aa6.31□□□□□ -1.4
UBE2D3-232ENST00000514755 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
UBE2D3-232ENST00000514755 A4D1N5 150 aa6.3□□□□□ -1.4
UBE2D3-232ENST00000514755 COX8AP10176 69 aa6.3□□□□□ -1.4
UBE2D3-232ENST00000514755 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
UBE2D3-232ENST00000514755 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
UBE2D3-232ENST00000514755 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
UBE2D3-232ENST00000514755 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
UBE2D3-232ENST00000514755 TRAV13-2A0A0B4J235 113 aa6.28□□□□□ -1.4
UBE2D3-232ENST00000514755 SPATA45Q537H7 98 aa6.28□□□□□ -1.4
UBE2D3-232ENST00000514755 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
UBE2D3-232ENST00000514755 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
UBE2D3-232ENST00000514755 SPRR1BP22528 89 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms