RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 SPANXB1Q9NS25 103 aaPredicted RBP4.46□□□□□ -1.7
RFC1-213ENST00000512275 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
RFC1-213ENST00000512275 HINT1P49773 126 aaPredicted RBP4.45□□□□□ -1.7
RFC1-213ENST00000512275 SPANXDQ9BXN6 97 aa4.45□□□□□ -1.7
RFC1-213ENST00000512275 SPANXCQ9NY87 97 aa4.45□□□□□ -1.7
RFC1-213ENST00000512275 RYR2Q92736 4967 aa4.45□□□□□ -1.7
RFC1-213ENST00000512275 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
RFC1-213ENST00000512275 RPL18AQ02543 176 aaKnown RBP4.44□□□□□ -1.7
RFC1-213ENST00000512275 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
RFC1-213ENST00000512275 MUSTN1Q8IVN3 82 aa4.44□□□□□ -1.7
RFC1-213ENST00000512275 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
RFC1-213ENST00000512275 M0R143 59 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 TSPAN13O95857 204 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 FXYD2P54710 66 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 CNBPP62633 177 aaKnown RBP4.43□□□□□ -1.7
RFC1-213ENST00000512275 COX17Q14061 63 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 TAL2Q16559 108 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 BVES-AS1Q5T3Y7 98 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
RFC1-213ENST00000512275 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
RFC1-213ENST00000512275 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
RFC1-213ENST00000512275 A0A096LNI7 61 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 K7ERJ3 54 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 IFITM1P13164 125 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 Q6ZVH6 145 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 NHP2Q9NX24 153 aaKnown RBP4.41□□□□□ -1.7
RFC1-213ENST00000512275 DNAH11Q96DT5 4516 aa4.41□□□□□ -1.7
RFC1-213ENST00000512275 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
RFC1-213ENST00000512275 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
RFC1-213ENST00000512275 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
RFC1-213ENST00000512275 C9orf163Q8N9P6 203 aa4.4□□□□□ -1.71
RFC1-213ENST00000512275 Q8NDZ9 215 aa4.4□□□□□ -1.71
RFC1-213ENST00000512275 COPS9Q8WXC6 57 aa4.4□□□□□ -1.71
RFC1-213ENST00000512275 NCR3O14931 201 aa4.39□□□□□ -1.71
RFC1-213ENST00000512275 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
RFC1-213ENST00000512275 PRR3P79522 188 aaKnown RBP4.39□□□□□ -1.71
RFC1-213ENST00000512275 FAT2Q9NYQ8 4349 aa4.39□□□□□ -1.71
RFC1-213ENST00000512275 PKD1P98161 4303 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 A6NDN8 102 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 H7C2G1 150 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 LINC00336Q6ZUF6 198 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 FAM19A5Q7Z5A7 132 aaPredicted RBP4.38□□□□□ -1.71
RFC1-213ENST00000512275 RAB37Q96AX2 223 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
RFC1-213ENST00000512275 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 C16orf90A8MZG2 172 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 PANO1I0J062 215 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 IGKV2D-28P01615 120 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 SDIM1Q6ZPB5 146 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 PKIGQ9Y2B9 76 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
RFC1-213ENST00000512275 A0A0B4J2C4 111 aa4.36□□□□□ -1.71
RFC1-213ENST00000512275 NDUFC2O95298 119 aa4.36□□□□□ -1.71
RFC1-213ENST00000512275 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
RFC1-213ENST00000512275 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
RFC1-213ENST00000512275 NAA38Q9BRA0 125 aaKnown RBP4.36□□□□□ -1.71
RFC1-213ENST00000512275 RYR3Q15413 4870 aa4.36□□□□□ -1.71
RFC1-213ENST00000512275 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
RFC1-213ENST00000512275 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
RFC1-213ENST00000512275 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
RFC1-213ENST00000512275 SPACA4Q8TDM5 124 aa4.35□□□□□ -1.71
RFC1-213ENST00000512275 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
RFC1-213ENST00000512275 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
RFC1-213ENST00000512275 M0QXV9 152 aa4.34□□□□□ -1.71
RFC1-213ENST00000512275 TAX1BP3O14907 124 aa4.34□□□□□ -1.71
RFC1-213ENST00000512275 S100A7L2Q5SY68 101 aa4.34□□□□□ -1.71
RFC1-213ENST00000512275 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
RFC1-213ENST00000512275 TRAV13-2A0A0B4J235 113 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 TRBV10-2A0A0K0K1G8 114 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 M0R378 163 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 HAMPP81172 84 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
RFC1-213ENST00000512275 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 DNAH8Q96JB1 4490 aa4.33□□□□□ -1.72
RFC1-213ENST00000512275 H3BUT2 72 aa4.32□□□□□ -1.72
RFC1-213ENST00000512275 PSMB2P49721 201 aa4.32□□□□□ -1.72
RFC1-213ENST00000512275 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
RFC1-213ENST00000512275 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
RFC1-213ENST00000512275 IGLV6-57P01721 117 aa4.31□□□□□ -1.72
RFC1-213ENST00000512275 SMIM11BQ8TCY0 68 aa4.31□□□□□ -1.72
RFC1-213ENST00000512275 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
RFC1-213ENST00000512275 DYNC1H1Q14204 4646 aaKnown RBP4.31□□□□□ -1.72
RFC1-213ENST00000512275 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
RFC1-213ENST00000512275 UBE2BP63146 152 aa4.3□□□□□ -1.72
RFC1-213ENST00000512275 KRTAP11-1Q8IUC1 163 aa4.3□□□□□ -1.72
RFC1-213ENST00000512275 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 A0A1B0GV90 55 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
RFC1-213ENST00000512275 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms