RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TOMM7Q9P0U1 55 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 SPCS1Q9Y6A9 102 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 IGLV7-43P04211 117 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 Q8IZM0 81 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 COX7B2Q8TF08 81 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 LITAFQ99732 161 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 LINC00474Q9P2X8 69 aa5.4□□□□□ -1.55
NUP54-211ENST00000512151 TIMM17BO60830 172 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
NUP54-211ENST00000512151 NDUFA1O15239 70 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 CFC1BP0CG36 223 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 CFC1P0CG37 223 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 RPL24P83731 157 aaKnown RBP5.38□□□□□ -1.55
NUP54-211ENST00000512151 SYCNQ0VAF6 134 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 C6orf226Q5I0X4 101 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
NUP54-211ENST00000512151 COPS9Q8WXC6 57 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 C6orf48Q9UBA6 75 aa5.38□□□□□ -1.55
NUP54-211ENST00000512151 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
NUP54-211ENST00000512151 PRSS2P07478 247 aa5.37□□□□□ -1.55
NUP54-211ENST00000512151 C9orf116Q5BN46 136 aaPredicted RBP5.37□□□□□ -1.55
NUP54-211ENST00000512151 SFTA2Q6UW10 78 aa5.37□□□□□ -1.55
NUP54-211ENST00000512151 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
NUP54-211ENST00000512151 RETNLBQ9BQ08 111 aa5.37□□□□□ -1.55
NUP54-211ENST00000512151 A4D1N5 150 aa5.36□□□□□ -1.55
NUP54-211ENST00000512151 IFITM1P13164 125 aa5.36□□□□□ -1.55
NUP54-211ENST00000512151 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
NUP54-211ENST00000512151 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
NUP54-211ENST00000512151 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
NUP54-211ENST00000512151 F8WDY8 70 aa5.35□□□□□ -1.55
NUP54-211ENST00000512151 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
NUP54-211ENST00000512151 CKS1BP61024 79 aa5.35□□□□□ -1.55
NUP54-211ENST00000512151 HERV-K104P63124 156 aa5.35□□□□□ -1.55
NUP54-211ENST00000512151 GAGE2BQ13066 116 aa5.35□□□□□ -1.55
NUP54-211ENST00000512151 PRO1854Q9UHT4 67 aa5.35□□□□□ -1.55
NUP54-211ENST00000512151 TRBV20-1A0A075B6N2 111 aa5.34□□□□□ -1.55
NUP54-211ENST00000512151 F8W1H4 67 aa5.34□□□□□ -1.55
NUP54-211ENST00000512151 CXCL5P42830 114 aa5.34□□□□□ -1.55
NUP54-211ENST00000512151 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
NUP54-211ENST00000512151 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
NUP54-211ENST00000512151 TRBV30A0A0K0K1B3 111 aa5.33□□□□□ -1.56
NUP54-211ENST00000512151 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
NUP54-211ENST00000512151 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
NUP54-211ENST00000512151 TLX1NBP0CAT3 122 aa5.32□□□□□ -1.56
NUP54-211ENST00000512151 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 H3BMG7 143 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 K7ERU9 68 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 CRYGAP11844 174 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 PFN2P35080 140 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 PRO0461Q9UI25 63 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 ERG28Q9UKR5 140 aa5.31□□□□□ -1.56
NUP54-211ENST00000512151 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
NUP54-211ENST00000512151 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
NUP54-211ENST00000512151 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
NUP54-211ENST00000512151 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
NUP54-211ENST00000512151 PKIGQ9Y2B9 76 aa5.3□□□□□ -1.56
NUP54-211ENST00000512151 NDUFC2-KCTD14E9PQ53 114 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 M0QXV9 152 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 TCL1BO95988 128 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
NUP54-211ENST00000512151 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 C9orf129Q5T035 196 aaKnown RBP5.29□□□□□ -1.56
NUP54-211ENST00000512151 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 A0A087X002 238 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 PSMB2P49721 201 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 LINC00158P58513 81 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
NUP54-211ENST00000512151 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 H3BS24 57 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 J3QR89 54 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 COX6CP09669 75 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 NPC2P61916 151 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 MT1HP80294 61 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 COX17Q14061 63 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 DAND5Q8N907 189 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 CBY1Q9Y3M2 126 aa5.28□□□□□ -1.56
NUP54-211ENST00000512151 TRIAP1O43715 76 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 Q1RN00 199 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 ASB16-AS1Q495Z4 193 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 MIR7-3HGQ8N6C7 128 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 Q8NDZ9 215 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
NUP54-211ENST00000512151 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms