RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LINC01561Q8N1V8 128 aa3.84□□□□□ -1.8
COPS4-209ENST00000511653 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 LOC389332A0A1B0GUA5 103 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 RPL28P46779 137 aaKnown RBP3.83□□□□□ -1.8
COPS4-209ENST00000511653 HINT1P49773 126 aaPredicted RBP3.83□□□□□ -1.8
COPS4-209ENST00000511653 CKS1BP61024 79 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 Q8IZM0 81 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 FAM19A2Q8N3H0 131 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 PRELID3AQ96N28 172 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 LINC00167Q96N53 147 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 AMELXQ99217 191 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 TP73-AS1Q9UF72 201 aa3.83□□□□□ -1.8
COPS4-209ENST00000511653 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 C6orf226Q5I0X4 101 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 CST9LQ9H4G1 147 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 CDKN2A-AS1Q9UH64 79 aa3.82□□□□□ -1.8
COPS4-209ENST00000511653 F8VRH5 84 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 FAM19A3Q7Z5A8 133 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 CYSLTR1Q9Y271 337 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 SYS1-DBNDD2H3BUS1 97 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 ATOH7Q8N100 152 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
COPS4-209ENST00000511653 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
COPS4-209ENST00000511653 HSBP1O75506 76 aa3.8□□□□□ -1.8
COPS4-209ENST00000511653 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
COPS4-209ENST00000511653 Q8N8P6 123 aa3.8□□□□□ -1.8
COPS4-209ENST00000511653 MAP1LC3AQ9H492 121 aa3.8□□□□□ -1.8
COPS4-209ENST00000511653 IGKV2-28A0A075B6P5 120 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 IGKV2D-28P01615 120 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 UBE2AP49459 152 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 PRLHP81277 87 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 FAM229BQ4G0N7 80 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 SLC25A34Q6PIV7 304 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 BOD1L2Q8IYS8 172 aa3.79□□□□□ -1.8
COPS4-209ENST00000511653 COX8AP10176 69 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 HERVK_113P63121 156 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 SEC11AP67812 179 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 C3orf22Q8N5N4 141 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
COPS4-209ENST00000511653 K7ERU9 68 aa3.78□□□□□ -1.81
COPS4-209ENST00000511653 CXCL5P42830 114 aa3.78□□□□□ -1.81
COPS4-209ENST00000511653 NKAPP1Q8N9T2 125 aa3.78□□□□□ -1.81
COPS4-209ENST00000511653 COX7B2Q8TF08 81 aa3.78□□□□□ -1.81
COPS4-209ENST00000511653 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 LEPROTL1O95214 131 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 SPINK8P0C7L1 97 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 TIMM17AQ99595 171 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
COPS4-209ENST00000511653 A0A096LNJ9 63 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 H3BRM9 83 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 K7EP34 96 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 Q8NDZ9 215 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 VPS25Q9BRG1 176 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 TMEM126AQ9H061 195 aa3.76□□□□□ -1.81
COPS4-209ENST00000511653 A0A1B0GV72 72 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 K7EMI3 77 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 MAP1LC3CQ9BXW4 147 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 TINCRA0A1B0GVN0 87 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 M0R378 163 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 NXT2Q9NPJ8 142 aaKnown RBP3.75□□□□□ -1.81
COPS4-209ENST00000511653 HSPB8Q9UJY1 196 aa3.75□□□□□ -1.81
COPS4-209ENST00000511653 SCGB1A1P11684 91 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 HSD52Q0P140 79 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 GTF2H5Q6ZYL4 71 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
COPS4-209ENST00000511653 LINC01546A6NGU7 62 aa3.73□□□□□ -1.81
COPS4-209ENST00000511653 PFN2P35080 140 aa3.73□□□□□ -1.81
COPS4-209ENST00000511653 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
COPS4-209ENST00000511653 HIGD1BQ9P298 99 aa3.73□□□□□ -1.81
COPS4-209ENST00000511653 A6NDN8 102 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 ATP5LO75964 103 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 ASB16-AS1Q495Z4 193 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 DAND5Q8N907 189 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 SPRR4Q96PI1 79 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
COPS4-209ENST00000511653 A0A1W2PPM0 123 aa3.71□□□□□ -1.81
COPS4-209ENST00000511653 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.81
COPS4-209ENST00000511653 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.81
COPS4-209ENST00000511653 ERG28Q9UKR5 140 aa3.71□□□□□ -1.81
COPS4-209ENST00000511653 PMVKQ15126 192 aa3.71□□□□□ -1.82
COPS4-209ENST00000511653 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
COPS4-209ENST00000511653 H3BUT2 72 aa3.7□□□□□ -1.82
COPS4-209ENST00000511653 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
COPS4-209ENST00000511653 SPAG11AQ6PDA7 123 aa3.7□□□□□ -1.82
COPS4-209ENST00000511653 LINC00337Q8N6G1 96 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms