RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-228ENST00000508974 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
UBE2D3-228ENST00000508974 E9PLD3 99 aa8.56□□□□□ -1.04
UBE2D3-228ENST00000508974 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
UBE2D3-228ENST00000508974 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
UBE2D3-228ENST00000508974 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-228ENST00000508974 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
UBE2D3-228ENST00000508974 B5MCH6 92 aa8.55□□□□□ -1.04
UBE2D3-228ENST00000508974 S100A7L2Q5SY68 101 aa8.55□□□□□ -1.04
UBE2D3-228ENST00000508974 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
UBE2D3-228ENST00000508974 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
UBE2D3-228ENST00000508974 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
UBE2D3-228ENST00000508974 NDUFC2O95298 119 aa8.52□□□□□ -1.05
UBE2D3-228ENST00000508974 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
UBE2D3-228ENST00000508974 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
UBE2D3-228ENST00000508974 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
UBE2D3-228ENST00000508974 Q8NBF4 154 aa8.51□□□□□ -1.05
UBE2D3-228ENST00000508974 Q9BRP9 147 aa8.51□□□□□ -1.05
UBE2D3-228ENST00000508974 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
UBE2D3-228ENST00000508974 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
UBE2D3-228ENST00000508974 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
UBE2D3-228ENST00000508974 KRTDAPP60985 99 aa8.5□□□□□ -1.05
UBE2D3-228ENST00000508974 PET117Q6UWS5 81 aa8.5□□□□□ -1.05
UBE2D3-228ENST00000508974 Q6ZRX8 168 aa8.5□□□□□ -1.05
UBE2D3-228ENST00000508974 MUC2Q02817 5179 aa8.49□□□□□ -1.05
UBE2D3-228ENST00000508974 IGLV7-46A0A075B6I9 117 aa8.49□□□□□ -1.05
UBE2D3-228ENST00000508974 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
UBE2D3-228ENST00000508974 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
UBE2D3-228ENST00000508974 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
UBE2D3-228ENST00000508974 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
UBE2D3-228ENST00000508974 LITAFQ99732 161 aa8.48□□□□□ -1.05
UBE2D3-228ENST00000508974 H3BS24 57 aa8.47□□□□□ -1.05
UBE2D3-228ENST00000508974 ZNF73O43830 326 aaPredicted RBP8.47□□□□□ -1.05
UBE2D3-228ENST00000508974 MOBPQ13875 183 aa8.47□□□□□ -1.05
UBE2D3-228ENST00000508974 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
UBE2D3-228ENST00000508974 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
UBE2D3-228ENST00000508974 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
UBE2D3-228ENST00000508974 TIMM17BO60830 172 aa8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 COA6Q5JTJ3 125 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 ATOH7Q8N100 152 aa8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 KRTAP9-9Q9BYP9 154 aa8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 KRTAP9-4Q9BYQ2 154 aa8.44□□□□□ -1.06
UBE2D3-228ENST00000508974 CTAG1AP78358 180 aa8.43□□□□□ -1.06
UBE2D3-228ENST00000508974 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
UBE2D3-228ENST00000508974 C20orf202A1L168 122 aa8.42□□□□□ -1.06
UBE2D3-228ENST00000508974 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
UBE2D3-228ENST00000508974 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
UBE2D3-228ENST00000508974 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
UBE2D3-228ENST00000508974 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-228ENST00000508974 SPINK1P00995 79 aa8.4□□□□□ -1.06
UBE2D3-228ENST00000508974 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
UBE2D3-228ENST00000508974 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
UBE2D3-228ENST00000508974 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
UBE2D3-228ENST00000508974 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-228ENST00000508974 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
UBE2D3-228ENST00000508974 PCP2Q8IVA1 136 aa8.36□□□□□ -1.07
UBE2D3-228ENST00000508974 COX7BP24311 80 aa8.35□□□□□ -1.07
UBE2D3-228ENST00000508974 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
UBE2D3-228ENST00000508974 Q8N377 158 aa8.34□□□□□ -1.07
UBE2D3-228ENST00000508974 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
UBE2D3-228ENST00000508974 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
UBE2D3-228ENST00000508974 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
UBE2D3-228ENST00000508974 A6NDN8 102 aa8.33□□□□□ -1.08
UBE2D3-228ENST00000508974 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-228ENST00000508974 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
UBE2D3-228ENST00000508974 HRCT1Q6UXD1 115 aa8.32□□□□□ -1.08
UBE2D3-228ENST00000508974 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
UBE2D3-228ENST00000508974 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
UBE2D3-228ENST00000508974 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 SLC25A20O43772 301 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 IFITM1P13164 125 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 S100A2P29034 98 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 Q1RN00 199 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 HIST3H2BBQ8N257 126 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
UBE2D3-228ENST00000508974 SPRR1BP22528 89 aa8.29□□□□□ -1.08
UBE2D3-228ENST00000508974 TAL2Q16559 108 aa8.29□□□□□ -1.08
UBE2D3-228ENST00000508974 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
UBE2D3-228ENST00000508974 AKR1D1P51857 326 aa8.28□□□□□ -1.08
UBE2D3-228ENST00000508974 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
UBE2D3-228ENST00000508974 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
UBE2D3-228ENST00000508974 Q6ZVH6 145 aa8.27□□□□□ -1.09
UBE2D3-228ENST00000508974 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
UBE2D3-228ENST00000508974 S100A6P06703 90 aa8.25□□□□□ -1.09
UBE2D3-228ENST00000508974 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-228ENST00000508974 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
UBE2D3-228ENST00000508974 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
UBE2D3-228ENST00000508974 HSBP1L1C9JCN9 74 aa8.24□□□□□ -1.09
UBE2D3-228ENST00000508974 S100A1P23297 94 aa8.24□□□□□ -1.09
UBE2D3-228ENST00000508974 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
UBE2D3-228ENST00000508974 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
UBE2D3-228ENST00000508974 TEX49A0A1B0GTD5 131 aa8.23□□□□□ -1.09
UBE2D3-228ENST00000508974 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
UBE2D3-228ENST00000508974 H7C2G1 150 aa8.22□□□□□ -1.09
UBE2D3-228ENST00000508974 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
UBE2D3-228ENST00000508974 A0A0G2JQZ4 141 aa8.21□□□□□ -1.1
UBE2D3-228ENST00000508974 LINC01547P58512 204 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms