RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 CREBBPQ92793 2442 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 KMT2BQ9UMN6 2715 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-209ENST00000508871 GVINP1Q7Z2Y8 2422 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 IGKV3-7A0A075B6H7 116 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 A0A1W2PNM2 257 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-209ENST00000508871 Q8NDZ9 215 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 MED13LQ71F56 2210 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 IGIPA6NJ69 53 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 RPL39LQ96EH5 51 aaKnown RBP2.44□□□□□ -2.02
NEDD4-209ENST00000508871 HRNRQ86YZ3 2850 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-209ENST00000508871 UBR5O95071 2799 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-209ENST00000508871 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 CMYA5Q8N3K9 4069 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 H3BNG1 76 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 GIG44P09565 113 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-209ENST00000508871 C15orf56Q8N910 161 aa2.44□□□□□ -2.02
NEDD4-209ENST00000508871 SPTBN1Q01082 2364 aaKnown RBP2.43□□□□□ -2.02
NEDD4-209ENST00000508871 CCL18P55774 89 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 KRTAP15-1Q3LI76 137 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 SMR3AQ99954 134 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 DCHS1Q96JQ0 3298 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 APC2O95996 2303 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 SMG1Q96Q15 3661 aaKnown RBP2.43□□□□□ -2.02
NEDD4-209ENST00000508871 DEFB1P60022 68 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 PIEZO2Q9H5I5 2752 aa2.43□□□□□ -2.02
NEDD4-209ENST00000508871 ASPMQ8IZT6 3477 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 A0A087WSZ3 146 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 Q5VV11 94 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 ZFHX2Q9C0A1 2572 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-209ENST00000508871 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 CELSR3Q9NYQ7 3312 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 DSCR10P59022 87 aa2.42□□□□□ -2.02
NEDD4-209ENST00000508871 PKDREJQ9NTG1 2253 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 ANK2Q01484 3957 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 LOC400499M0QZD8 3231 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 CDC42SE2Q9NRR3 84 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 CEP250Q9BV73 2442 aa2.41□□□□□ -2.02
NEDD4-209ENST00000508871 NOP10Q9NPE3 64 aaKnown RBP2.41□□□□□ -2.02
NEDD4-209ENST00000508871 ANKRD11Q6UB99 2663 aaPredicted RBP2.4□□□□□ -2.02
NEDD4-209ENST00000508871 CACNA1BQ00975 2339 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.4□□□□□ -2.036e-7■■■□□ 15.2
NEDD4-209ENST00000508871 COX7BP24311 80 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 SORL1Q92673 2214 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 HIVEP3Q5T1R4 2406 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 OBSCN-AS1Q96MR7 158 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 ETDCA0A1B0GVM5 59 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 PRO0255Q9UI72 69 aa2.4□□□□□ -2.03
NEDD4-209ENST00000508871 SPART-AS1P0CW21 52 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 KRTAP3-1Q9BYR8 98 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 ANKHD1Q8IWZ3 2542 aaKnown RBP2.39□□□□□ -2.03
NEDD4-209ENST00000508871 PANO1I0J062 215 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 FN1P02751 2386 aaKnown RBP2.39□□□□□ -2.03
NEDD4-209ENST00000508871 NDUFA1O15239 70 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 EP300Q09472 2414 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-209ENST00000508871 ITPR1Q14643 2758 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 ATMQ13315 3056 aa2.39□□□□□ -2.03
NEDD4-209ENST00000508871 TPRP12270 2363 aaKnown RBP2.39□□□□□ -2.03
NEDD4-209ENST00000508871 ACACAQ13085 2346 aa2.38□□□□□ -2.03
NEDD4-209ENST00000508871 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
NEDD4-209ENST00000508871 CNBPP62633 177 aaKnown RBP2.38□□□□□ -2.03
NEDD4-209ENST00000508871 RPL39P62891 51 aaKnown RBP2.38□□□□□ -2.03
NEDD4-209ENST00000508871 KALRNO60229 2985 aa2.38□□□□□ -2.03
NEDD4-209ENST00000508871 LELP1Q5T871 98 aa2.38□□□□□ -2.03
NEDD4-209ENST00000508871 HTN1P15515 57 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 SPINK7P58062 85 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 KRTAP10-11P60412 298 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 DOPEY1Q5JWR5 2465 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 NBPF19A0A087WUL8 3843 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 LAMA5O15230 3695 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 Q5W150 140 aa2.37□□□□□ -2.03
NEDD4-209ENST00000508871 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
NEDD4-209ENST00000508871 TTC28Q96AY4 2481 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 PDZD2O15018 2839 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 KRTAP21-3Q3LHN1 58 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 Q6ZRX8 168 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 DMXL2Q8TDJ6 3036 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 USP24Q9UPU5 2620 aa2.36□□□□□ -2.03
NEDD4-209ENST00000508871 Q8IZM0 81 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 DEFB135Q30KP9 77 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 F8P00451 2351 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 MGAQ8IWI9 3026 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 FBN2P35556 2912 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 PKD1L2Q7Z442 2459 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 ZZEF1O43149 2961 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 CNOT1A5YKK6 2376 aaKnown RBP2.35□□□□□ -2.03
NEDD4-209ENST00000508871 LINC00959A0A1B0GUT2 108 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 DEFB121Q5J5C9 76 aa2.35□□□□□ -2.03
NEDD4-209ENST00000508871 PCNX1Q96RV3 2341 aa2.34□□□□□ -2.03
NEDD4-209ENST00000508871 GVQW2A0A096LPI5 108 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-209ENST00000508871 LINC00846Q9NV44 126 aa2.34□□□□□ -2.03
NEDD4-209ENST00000508871 PRR34Q9NV39 138 aa2.34□□□□□ -2.04
NEDD4-209ENST00000508871 IGSF10Q6WRI0 2623 aa2.34□□□□□ -2.04
NEDD4-209ENST00000508871 COX6A2Q02221 97 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms