RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
GYPB-209ENST00000508618 ALX1Q15699 326 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 CLPSL2Q6UWE3 100 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 SCIMPQ6UWF3 145 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 KCNRGQ8N5I3 272 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 PDCD10Q9BUL8 212 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 GSKIPQ9P0R6 139 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 DUOX2Q9NRD8 1548 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 ANKRD30AQ9BXX3 1397 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 ABCA6Q8N139 1617 aa-0.6□□□□□ -2.51
GYPB-209ENST00000508618 ERVK-7P63135 1459 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 MAGI1Q96QZ7 1491 aaPredicted RBP-0.61□□□□□ -2.51
GYPB-209ENST00000508618 MLH3Q9UHC1 1453 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 PDCD11Q14690 1871 aaKnown RBP-0.61□□□□□ -2.51
GYPB-209ENST00000508618 NWD1Q149M9 1564 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 SHPRHQ149N8 1683 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 ALS2Q96Q42 1657 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 IGLC7A0M8Q6 106 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 ARPC5O15511 151 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 STATHP02808 62 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 GUCA1AP43080 201 aaPredicted RBP-0.61□□□□□ -2.51
GYPB-209ENST00000508618 PRLHP81277 87 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 RPS27LQ71UM5 84 aaKnown RBP-0.61□□□□□ -2.51
GYPB-209ENST00000508618 DDX60Q8IY21 1712 aaKnown RBP-0.61□□□□□ -2.51
GYPB-209ENST00000508618 NALCNQ8IZF0 1738 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 CFTRP13569 1480 aa-0.61□□□□□ -2.51
GYPB-209ENST00000508618 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
GYPB-209ENST00000508618 PREX1Q8TCU6 1659 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 RRBP1Q9P2E9 1410 aaKnown RBP-0.62□□□□□ -2.51
GYPB-209ENST00000508618 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 CC2D2AQ9P2K1 1620 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 A0A087WVE0 104 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 TRBV7-4A0A0J9YYF1 115 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 F8WEM9 126 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 H3BSH0 61 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 SCGB1A1P11684 91 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 HIST1H1DP16402 221 aaKnown RBP-0.62□□□□□ -2.51
GYPB-209ENST00000508618 TPPP2P59282 170 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 UBE2D3P61077 147 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 Q8N8P6 123 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 LZICQ8WZA0 190 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 DYNLRB1Q9NP97 96 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 KIF20BQ96Q89 1820 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 NLRP1Q9C000 1473 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 DIP2AQ14689 1571 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 C5P01031 1676 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 KIF1AQ12756 1690 aa-0.62□□□□□ -2.51
GYPB-209ENST00000508618 CPSF1Q10570 1443 aaKnown RBP-0.63□□□□□ -2.51
GYPB-209ENST00000508618 SCAPERQ9BY12 1400 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 ANKRD50Q9ULJ7 1429 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 ERICH3Q5RHP9 1530 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 MAGI3Q5TCQ9 1506 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.63□□□□□ -2.51
GYPB-209ENST00000508618 DCAF1Q9Y4B6 1507 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 HMGN4O00479 90 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 SFT2D2O95562 160 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 COPZ1P61923 177 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 RPS25P62851 125 aaKnown RBP-0.63□□□□□ -2.51
GYPB-209ENST00000508618 SMCO1Q147U7 214 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 LSM10Q969L4 123 aaKnown RBP-0.63□□□□□ -2.51
GYPB-209ENST00000508618 NAA60Q9H7X0 242 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 MYOM2P54296 1465 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 DIP2CQ9Y2E4 1556 aa-0.63□□□□□ -2.51
GYPB-209ENST00000508618 CCDC180Q9P1Z9 1646 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 LMO7Q8WWI1 1683 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 GLI2P10070 1586 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 RB1CC1Q8TDY2 1594 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 PLIN4Q96Q06 1357 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 TRBV7-3A0A075B6L6 115 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 PIGBOS1A0A0B4J2F0 54 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 MIF4GDA9UHW6 222 aaKnown RBP-0.64□□□□□ -2.51
GYPB-209ENST00000508618 CCL22O00626 93 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 COX8AP10176 69 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 HMGA1P17096 107 aaKnown RBP-0.64□□□□□ -2.51
GYPB-209ENST00000508618 C10orf113Q5VZT2 155 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 LCN9Q8WX39 176 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 TCEAL4Q96EI5 215 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 MGST2Q99735 147 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 TMEM191AQ9H0A3 160 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 FAIMQ9NVQ4 179 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 CRIPTQ9P021 101 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 COPZ2Q9P299 210 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 LINC01558Q9Y6Z2 57 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 KIAA1551Q9HCM1 1747 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 MYO3AQ8NEV4 1616 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 VPS8Q8N3P4 1428 aa-0.64□□□□□ -2.51
GYPB-209ENST00000508618 NHSQ6T4R5 1651 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 ROCK2O75116 1388 aaKnown RBP-0.65□□□□□ -2.51
GYPB-209ENST00000508618 M0QZ58 72 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 IFNGP01579 166 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 MGPP08493 103 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 TFF3Q07654 80 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 SMIM21Q3B7S5 101 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 C12orf73Q69YU5 71 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 AKAP14Q86UN6 197 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 FAM223AQ8IWN6 122 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 MAFIPQ8WZ33 124 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 PIK3C2BO00750 1634 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
GYPB-209ENST00000508618 MAPKBP1O60336 1514 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms