RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 COX6CP09669 75 aa10.9□□□□□ -0.66
RNF4-209ENST00000507784 VAMP3Q15836 100 aa10.9□□□□□ -0.66
RNF4-209ENST00000507784 REG3GQ6UW15 175 aa10.9□□□□□ -0.66
RNF4-209ENST00000507784 KRTAP11-1Q8IUC1 163 aa10.9□□□□□ -0.66
RNF4-209ENST00000507784 DNAH8Q96JB1 4490 aa10.88□□□□□ -0.67
RNF4-209ENST00000507784 ETDCA0A1B0GVM5 59 aa10.88□□□□□ -0.67
RNF4-209ENST00000507784 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
RNF4-209ENST00000507784 COX7BP24311 80 aa10.86□□□□□ -0.67
RNF4-209ENST00000507784 FABP2P12104 132 aa10.85□□□□□ -0.67
RNF4-209ENST00000507784 XGP55808 180 aa10.85□□□□□ -0.67
RNF4-209ENST00000507784 LYRM7Q5U5X0 104 aa10.85□□□□□ -0.67
RNF4-209ENST00000507784 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
RNF4-209ENST00000507784 H0YGX0 51 aa10.84□□□□□ -0.67
RNF4-209ENST00000507784 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
RNF4-209ENST00000507784 SPRR1AP35321 89 aa10.83□□□□□ -0.68
RNF4-209ENST00000507784 CLEC2BQ92478 149 aa10.83□□□□□ -0.68
RNF4-209ENST00000507784 PSORS1C2Q9UIG4 136 aa10.83□□□□□ -0.68
RNF4-209ENST00000507784 TRBV7-6A0A0J9YX20 115 aa10.82□□□□□ -0.68
RNF4-209ENST00000507784 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
RNF4-209ENST00000507784 B5MCH6 92 aa10.81□□□□□ -0.68
RNF4-209ENST00000507784 UBE2AP49459 152 aa10.81□□□□□ -0.68
RNF4-209ENST00000507784 A0A1B0GV90 55 aa10.8□□□□□ -0.68
RNF4-209ENST00000507784 KRTAP4-16G5E9R7 235 aaPredicted RBP10.8□□□□□ -0.68
RNF4-209ENST00000507784 BCE1O60756 84 aa10.8□□□□□ -0.68
RNF4-209ENST00000507784 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
RNF4-209ENST00000507784 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
RNF4-209ENST00000507784 SPCS1Q9Y6A9 102 aa10.8□□□□□ -0.68
RNF4-209ENST00000507784 TCL1BO95988 128 aa10.79□□□□□ -0.68
RNF4-209ENST00000507784 PRLHP81277 87 aa10.79□□□□□ -0.68
RNF4-209ENST00000507784 SLC25A20O43772 301 aa10.78□□□□□ -0.68
RNF4-209ENST00000507784 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
RNF4-209ENST00000507784 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
RNF4-209ENST00000507784 SNCGO76070 127 aa10.77□□□□□ -0.69
RNF4-209ENST00000507784 ATXN8Q156A1 80 aa10.77□□□□□ -0.69
RNF4-209ENST00000507784 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
RNF4-209ENST00000507784 Q6ZRX8 168 aa10.77□□□□□ -0.69
RNF4-209ENST00000507784 LRP1BQ9NZR2 4599 aa10.76□□□□□ -0.69
RNF4-209ENST00000507784 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
RNF4-209ENST00000507784 PKHD1P08F94 4074 aa10.76□□□□□ -0.69
RNF4-209ENST00000507784 hADV29S1A0JD25 119 aa10.75□□□□□ -0.69
RNF4-209ENST00000507784 K7EP34 96 aa10.74□□□□□ -0.69
RNF4-209ENST00000507784 LST1O00453 97 aa10.74□□□□□ -0.69
RNF4-209ENST00000507784 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
RNF4-209ENST00000507784 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
RNF4-209ENST00000507784 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
RNF4-209ENST00000507784 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
RNF4-209ENST00000507784 GTF2H5Q6ZYL4 71 aa10.73□□□□□ -0.69
RNF4-209ENST00000507784 Q9BRP9 147 aa10.73□□□□□ -0.69
RNF4-209ENST00000507784 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
RNF4-209ENST00000507784 DNAL4O96015 105 aa10.72□□□□□ -0.69
RNF4-209ENST00000507784 IGLV7-43P04211 117 aa10.72□□□□□ -0.69
RNF4-209ENST00000507784 SMCR5Q8TEV8 140 aa10.72□□□□□ -0.69
RNF4-209ENST00000507784 A0A1B0GX51 115 aa10.71□□□□□ -0.69
RNF4-209ENST00000507784 H0Y9J4 135 aa10.71□□□□□ -0.69
RNF4-209ENST00000507784 H3BMG7 143 aa10.7□□□□□ -0.7
RNF4-209ENST00000507784 TRACP01848 142 aa10.7□□□□□ -0.7
RNF4-209ENST00000507784 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
RNF4-209ENST00000507784 ZNF861PO60384 105 aa10.68□□□□□ -0.7
RNF4-209ENST00000507784 KRTAP13-1Q8IUC0 172 aa10.68□□□□□ -0.7
RNF4-209ENST00000507784 C9JAW5 83 aa10.67□□□□□ -0.7
RNF4-209ENST00000507784 Q6ZQY7 126 aa10.67□□□□□ -0.7
RNF4-209ENST00000507784 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
RNF4-209ENST00000507784 DEFB105AQ8NG35 78 aa10.66□□□□□ -0.7
RNF4-209ENST00000507784 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.7
RNF4-209ENST00000507784 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.65□□□□□ -0.7
RNF4-209ENST00000507784 ST20-AS1Q8NBB2 130 aa10.65□□□□□ -0.7
RNF4-209ENST00000507784 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
RNF4-209ENST00000507784 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
RNF4-209ENST00000507784 ORMDL1Q9P0S3 153 aa10.64□□□□□ -0.71
RNF4-209ENST00000507784 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
RNF4-209ENST00000507784 BAALC-AS2P0C853 105 aa10.62□□□□□ -0.71
RNF4-209ENST00000507784 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
RNF4-209ENST00000507784 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
RNF4-209ENST00000507784 GHRHP01286 108 aa10.59□□□□□ -0.71
RNF4-209ENST00000507784 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
RNF4-209ENST00000507784 Q5VSD8 79 aa10.58□□□□□ -0.72
RNF4-209ENST00000507784 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
RNF4-209ENST00000507784 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
RNF4-209ENST00000507784 H3BQ85 93 aa10.56□□□□□ -0.72
RNF4-209ENST00000507784 TMEM256-PLSCR3K7ERE1 68 aa10.56□□□□□ -0.72
RNF4-209ENST00000507784 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
RNF4-209ENST00000507784 RYR1P21817 5038 aa10.56□□□□□ -0.72
RNF4-209ENST00000507784 H3BT86 120 aa10.55□□□□□ -0.72
RNF4-209ENST00000507784 LINC01547P58512 204 aaPredicted RBP10.55□□□□□ -0.72
RNF4-209ENST00000507784 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
RNF4-209ENST00000507784 Q8N377 158 aa10.55□□□□□ -0.72
RNF4-209ENST00000507784 PRO0461Q9UI25 63 aa10.55□□□□□ -0.72
RNF4-209ENST00000507784 IGLV5-48A0A075B6I7 105 aa10.54□□□□□ -0.72
RNF4-209ENST00000507784 F8W1H4 67 aa10.54□□□□□ -0.72
RNF4-209ENST00000507784 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
RNF4-209ENST00000507784 ANKRD29Q8N6D5 301 aa10.54□□□□□ -0.72
RNF4-209ENST00000507784 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
RNF4-209ENST00000507784 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
RNF4-209ENST00000507784 Q8N1X5 172 aa10.52□□□□□ -0.73
RNF4-209ENST00000507784 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
RNF4-209ENST00000507784 A0A1B0GV72 72 aa10.5□□□□□ -0.73
RNF4-209ENST00000507784 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
RNF4-209ENST00000507784 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
RNF4-209ENST00000507784 SPRR1BP22528 89 aa10.49□□□□□ -0.73
RNF4-209ENST00000507784 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms