RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MRPL55Q7Z7F7 128 aaKnown RBP11.13□□□□□ -0.63
TRAPPC11-204ENST00000505676 DSCR8Q96T75 97 aa11.13□□□□□ -0.63
TRAPPC11-204ENST00000505676 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
TRAPPC11-204ENST00000505676 Q6JHZ5 121 aa11.1□□□□□ -0.63
TRAPPC11-204ENST00000505676 Q6ZQT0 140 aa11.1□□□□□ -0.63
TRAPPC11-204ENST00000505676 KRTAP21-3Q3LHN1 58 aa11.09□□□□□ -0.63
TRAPPC11-204ENST00000505676 ATP5EP2Q5VTU8 51 aa11.09□□□□□ -0.63
TRAPPC11-204ENST00000505676 Q6ZRX8 168 aa11.09□□□□□ -0.63
TRAPPC11-204ENST00000505676 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
TRAPPC11-204ENST00000505676 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
TRAPPC11-204ENST00000505676 KRTAP4-16G5E9R7 235 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC11-204ENST00000505676 LINC00846Q9NV44 126 aa11.08□□□□□ -0.64
TRAPPC11-204ENST00000505676 DYNC2H1Q8NCM8 4307 aaKnown RBP11.08□□□□□ -0.64
TRAPPC11-204ENST00000505676 B5MCH6 92 aa11.07□□□□□ -0.64
TRAPPC11-204ENST00000505676 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
TRAPPC11-204ENST00000505676 FAM168BA1KXE4 195 aa11.07□□□□□ -0.64
TRAPPC11-204ENST00000505676 FAM19A5Q7Z5A7 132 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC11-204ENST00000505676 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
TRAPPC11-204ENST00000505676 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
TRAPPC11-204ENST00000505676 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
TRAPPC11-204ENST00000505676 UBL5Q9BZL1 73 aa11.05□□□□□ -0.64
TRAPPC11-204ENST00000505676 TRBV7-4A0A0J9YYF1 115 aa11.05□□□□□ -0.64
TRAPPC11-204ENST00000505676 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
TRAPPC11-204ENST00000505676 A0A096LNI7 61 aa11.04□□□□□ -0.64
TRAPPC11-204ENST00000505676 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
TRAPPC11-204ENST00000505676 Q6ZRN7 208 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC11-204ENST00000505676 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
TRAPPC11-204ENST00000505676 ANAPC13Q9BS18 74 aa11.04□□□□□ -0.64
TRAPPC11-204ENST00000505676 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
TRAPPC11-204ENST00000505676 IGLV5-48A0A075B6I7 105 aa10.99□□□□□ -0.65
TRAPPC11-204ENST00000505676 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC11-204ENST00000505676 A0A1B0GW54 56 aa10.98□□□□□ -0.65
TRAPPC11-204ENST00000505676 IGKV2-24A0A0C4DH68 120 aa10.97□□□□□ -0.65
TRAPPC11-204ENST00000505676 Q9BRP9 147 aa10.97□□□□□ -0.65
TRAPPC11-204ENST00000505676 Q8N377 158 aa10.96□□□□□ -0.66
TRAPPC11-204ENST00000505676 COL7A1Q02388 2944 aa10.96□□□□□ -0.66
TRAPPC11-204ENST00000505676 A0A1W2PNN7 141 aa10.94□□□□□ -0.66
TRAPPC11-204ENST00000505676 LINC01547P58512 204 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC11-204ENST00000505676 UBE2BP63146 152 aa10.94□□□□□ -0.66
TRAPPC11-204ENST00000505676 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
TRAPPC11-204ENST00000505676 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
TRAPPC11-204ENST00000505676 H0Y9J4 135 aa10.93□□□□□ -0.66
TRAPPC11-204ENST00000505676 Q6ZR54 194 aa10.93□□□□□ -0.66
TRAPPC11-204ENST00000505676 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
TRAPPC11-204ENST00000505676 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
TRAPPC11-204ENST00000505676 A0A087WTM6 91 aa10.9□□□□□ -0.66
TRAPPC11-204ENST00000505676 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
TRAPPC11-204ENST00000505676 CXCL6P80162 114 aa10.9□□□□□ -0.66
TRAPPC11-204ENST00000505676 ATOX1O00244 68 aa10.89□□□□□ -0.67
TRAPPC11-204ENST00000505676 Q6ZVQ6 151 aa10.89□□□□□ -0.67
TRAPPC11-204ENST00000505676 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
TRAPPC11-204ENST00000505676 EPM2AB3EWF7 344 aa10.88□□□□□ -0.67
TRAPPC11-204ENST00000505676 TNP2Q05952 138 aa10.88□□□□□ -0.67
TRAPPC11-204ENST00000505676 M0R2N4 97 aa10.86□□□□□ -0.67
TRAPPC11-204ENST00000505676 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC11-204ENST00000505676 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
TRAPPC11-204ENST00000505676 F8WEM9 126 aa10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 ERC2-IT1O76042 136 aa10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
TRAPPC11-204ENST00000505676 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
TRAPPC11-204ENST00000505676 WWC2-AS2Q96NR7 200 aa10.81□□□□□ -0.68
TRAPPC11-204ENST00000505676 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
TRAPPC11-204ENST00000505676 BCE1O60756 84 aa10.81□□□□□ -0.68
TRAPPC11-204ENST00000505676 HAMPP81172 84 aa10.81□□□□□ -0.68
TRAPPC11-204ENST00000505676 PRLHP81277 87 aa10.8□□□□□ -0.68
TRAPPC11-204ENST00000505676 IGLV8-61A0A075B6I0 122 aa10.8□□□□□ -0.68
TRAPPC11-204ENST00000505676 RTL8CO15255 209 aa10.8□□□□□ -0.68
TRAPPC11-204ENST00000505676 SPRR1BP22528 89 aa10.8□□□□□ -0.68
TRAPPC11-204ENST00000505676 Q8NBF4 154 aa10.8□□□□□ -0.68
TRAPPC11-204ENST00000505676 PLECQ15149 4684 aaKnown RBP10.79□□□□□ -0.68
TRAPPC11-204ENST00000505676 VPS13DQ5THJ4 4388 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 UBE2AP49459 152 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 NREPQ16612 68 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 SMIM29Q86T20 159 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 SPRR4Q96PI1 79 aa10.78□□□□□ -0.68
TRAPPC11-204ENST00000505676 UQCRQO14949 82 aa10.77□□□□□ -0.68
TRAPPC11-204ENST00000505676 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
TRAPPC11-204ENST00000505676 CSMD3Q7Z407 3707 aa10.76□□□□□ -0.69
TRAPPC11-204ENST00000505676 C3orf22Q8N5N4 141 aa10.76□□□□□ -0.69
TRAPPC11-204ENST00000505676 A0A087WVE0 104 aa10.75□□□□□ -0.69
TRAPPC11-204ENST00000505676 LINC00476Q8WZB0 136 aa10.75□□□□□ -0.69
TRAPPC11-204ENST00000505676 LY6G6CO95867 125 aa10.74□□□□□ -0.69
TRAPPC11-204ENST00000505676 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
TRAPPC11-204ENST00000505676 COX7CP15954 63 aa10.74□□□□□ -0.69
TRAPPC11-204ENST00000505676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC11-204ENST00000505676 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 C3orf84H3BNL1 204 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
TRAPPC11-204ENST00000505676 PANO1I0J062 215 aa10.72□□□□□ -0.69
TRAPPC11-204ENST00000505676 CRYGAP11844 174 aa10.72□□□□□ -0.69
TRAPPC11-204ENST00000505676 SERP2Q8N6R1 65 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms