RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
CDC42SE2-208ENST00000505065 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 CFC1P0CG37 223 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 HSD52Q0P140 79 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 SPRR1BP22528 89 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 Q9BRP9 147 aa4.98□□□□□ -1.61
CDC42SE2-208ENST00000505065 OXTP01178 125 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 DDTP30046 118 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 LINC01600Q96MT4 127 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 Q6ZRX8 168 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 A4D1N5 150 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 NKAPP1Q8N9T2 125 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 SCGB1D4Q6XE38 83 aa4.97□□□□□ -1.61
CDC42SE2-208ENST00000505065 TRAV13-2A0A0B4J235 113 aa4.96□□□□□ -1.61
CDC42SE2-208ENST00000505065 NCR3O14931 201 aa4.96□□□□□ -1.61
CDC42SE2-208ENST00000505065 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
CDC42SE2-208ENST00000505065 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
CDC42SE2-208ENST00000505065 FAM229BQ4G0N7 80 aa4.95□□□□□ -1.62
CDC42SE2-208ENST00000505065 FXYD2P54710 66 aa4.95□□□□□ -1.62
CDC42SE2-208ENST00000505065 INAFM2P0DMQ5 153 aa4.95□□□□□ -1.62
CDC42SE2-208ENST00000505065 IGLV5-48A0A075B6I7 105 aa4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 A0A0U1RRA0 63 aa4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 ZNF73O43830 326 aaPredicted RBP4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 BVES-AS1Q5T3Y7 98 aa4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 RPL37AP8A6NKH3 93 aa4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
CDC42SE2-208ENST00000505065 PRO1933Q9H354 126 aa4.93□□□□□ -1.62
CDC42SE2-208ENST00000505065 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
CDC42SE2-208ENST00000505065 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
CDC42SE2-208ENST00000505065 DIRC1Q969H9 104 aa4.92□□□□□ -1.62
CDC42SE2-208ENST00000505065 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
CDC42SE2-208ENST00000505065 NPC2P61916 151 aa4.91□□□□□ -1.62
CDC42SE2-208ENST00000505065 TMEM238LA0A1B0GVL6 79 aa4.91□□□□□ -1.62
CDC42SE2-208ENST00000505065 A0A1B0GX51 115 aa4.9□□□□□ -1.62
CDC42SE2-208ENST00000505065 UBE2BP63146 152 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 A6NJY4 79 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 LINC00575Q6W349 94 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 DHRS4-AS1Q9P1J3 65 aa4.9□□□□□ -1.63
CDC42SE2-208ENST00000505065 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
CDC42SE2-208ENST00000505065 PRO1854Q9UHT4 67 aa4.89□□□□□ -1.63
CDC42SE2-208ENST00000505065 IGLV8-61A0A075B6I0 122 aa4.89□□□□□ -1.63
CDC42SE2-208ENST00000505065 PPDPFLQ8WWR9 84 aa4.89□□□□□ -1.63
CDC42SE2-208ENST00000505065 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 TSPAN13O95857 204 aa4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 TSTD3H0UI37 97 aa4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 RPL13AP40429 203 aaKnown RBP4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 C6orf99Q4VX62 202 aa4.88□□□□□ -1.63
CDC42SE2-208ENST00000505065 PRLHP81277 87 aa4.87□□□□□ -1.63
CDC42SE2-208ENST00000505065 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
CDC42SE2-208ENST00000505065 COX7BP24311 80 aa4.87□□□□□ -1.63
CDC42SE2-208ENST00000505065 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
CDC42SE2-208ENST00000505065 A0A087X002 238 aa4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 FAM19A1Q7Z5A9 133 aa4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 RPS29P62273 56 aaKnown RBP4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 ZNF706Q9Y5V0 76 aaPredicted RBP4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
CDC42SE2-208ENST00000505065 M0R143 59 aa4.85□□□□□ -1.63
CDC42SE2-208ENST00000505065 TRIAP1O43715 76 aa4.85□□□□□ -1.63
CDC42SE2-208ENST00000505065 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
CDC42SE2-208ENST00000505065 H0YGX0 51 aa4.85□□□□□ -1.63
CDC42SE2-208ENST00000505065 UBE2AP49459 152 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 K7ERJ3 54 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 Q8N377 158 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 HERC1Q15751 4861 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 TAX1BP3O14907 124 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 Q5XG85 94 aa4.83□□□□□ -1.64
CDC42SE2-208ENST00000505065 NHP2Q9NX24 153 aaKnown RBP4.82□□□□□ -1.64
CDC42SE2-208ENST00000505065 A6NDN8 102 aa4.82□□□□□ -1.64
CDC42SE2-208ENST00000505065 RAB37Q96AX2 223 aa4.81□□□□□ -1.64
CDC42SE2-208ENST00000505065 LST1O00453 97 aa4.81□□□□□ -1.64
CDC42SE2-208ENST00000505065 ST20-AS1Q8NBB2 130 aa4.81□□□□□ -1.64
CDC42SE2-208ENST00000505065 TRACP01848 142 aa4.81□□□□□ -1.64
CDC42SE2-208ENST00000505065 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
CDC42SE2-208ENST00000505065 Q6Q795 121 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 H3BQ85 93 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 CD164Q04900 197 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 OBSCN-AS1Q96MR7 158 aa4.8□□□□□ -1.64
CDC42SE2-208ENST00000505065 TEX49A0A1B0GTD5 131 aa4.79□□□□□ -1.64
CDC42SE2-208ENST00000505065 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
CDC42SE2-208ENST00000505065 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
CDC42SE2-208ENST00000505065 SSBP3-AS1Q7Z2R9 100 aa4.79□□□□□ -1.64
CDC42SE2-208ENST00000505065 PRR26Q8N8Z3 221 aa4.79□□□□□ -1.64
CDC42SE2-208ENST00000505065 C3orf22Q8N5N4 141 aa4.78□□□□□ -1.64
CDC42SE2-208ENST00000505065 CRYGAP11844 174 aa4.78□□□□□ -1.64
CDC42SE2-208ENST00000505065 VAMP3Q15836 100 aa4.78□□□□□ -1.64
CDC42SE2-208ENST00000505065 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
CDC42SE2-208ENST00000505065 Q8NBF4 154 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms