RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LOC107984640A0A0U1RRK4 108 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 LY6G6DO95868 133 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 DEFB112Q30KQ8 113 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 LINC00337Q8N6G1 96 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 C4orf3Q8WVX3 66 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 DPH3Q96FX2 82 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 CAMK2N2Q96S95 79 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 LINC00846Q9NV44 126 aa2.78□□□□□ -1.96
RFC1-208ENST00000504849 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
RFC1-208ENST00000504849 PKDREJQ9NTG1 2253 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 TRGV2A0A075B6R0 118 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 FAM168BA1KXE4 195 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 KRTAP16-1A8MUX0 517 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 PDE6GP18545 87 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 CCL18P55774 89 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 ATP5EP56381 51 aaPredicted RBP2.77□□□□□ -1.97
RFC1-208ENST00000504849 SS18Q15532 418 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 TYMSOSQ8TAI1 123 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 MUC7Q8TAX7 377 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 LINC00167Q96N53 147 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 UPK3BQ9BT76 320 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 C22orf24Q9Y442 160 aa2.77□□□□□ -1.97
RFC1-208ENST00000504849 VPS13CQ709C8 3753 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 MEGF8Q7Z7M0 2845 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 MXRA5Q9NR99 2828 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
RFC1-208ENST00000504849 TRAV7A0A075B6U4 112 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 TRGV4A0A0C4DH28 118 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 NCR3O14931 201 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 NDUFC1O43677 76 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 UBE2AP49459 152 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 COX17Q14061 63 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 DEFB114Q30KQ6 69 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
RFC1-208ENST00000504849 NTM-AS1Q6ZSK4 140 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 Q8IZM0 81 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 SERP1Q9Y6X1 66 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 MAP1AP78559 2803 aaPredicted RBP2.76□□□□□ -1.97
RFC1-208ENST00000504849 MUC4Q99102 2169 aa2.76□□□□□ -1.97
RFC1-208ENST00000504849 A0A087WVE0 104 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 LOC110117498A0A087WWA1 95 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 IGKV3OR2-268A0A0C4DH90 116 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 C19orf84I3L1E1 186 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 C10orf99Q6UWK7 81 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 LYPD5Q6UWN5 251 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 Q8N814 137 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 DSCR8Q96T75 97 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 NOP10Q9NPE3 64 aaKnown RBP2.75□□□□□ -1.97
RFC1-208ENST00000504849 PRRC2CQ9Y520 2896 aaKnown RBP2.75□□□□□ -1.97
RFC1-208ENST00000504849 ROS1P08922 2347 aa2.75□□□□□ -1.97
RFC1-208ENST00000504849 TRAV23DV6A0A075B6W5 121 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 PRM2P04554 102 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 XCL1P47992 114 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 RBM3P98179 157 aaKnown RBP2.74□□□□□ -1.97
RFC1-208ENST00000504849 DEFB136Q30KP8 78 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 ENHOQ6UWT2 76 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 Q6ZTI0 123 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 C1orf158Q8N1D5 194 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 LAMTOR3Q9UHA4 124 aa2.74□□□□□ -1.97
RFC1-208ENST00000504849 NSD1Q96L73 2696 aaPredicted RBP2.73□□□□□ -1.97
RFC1-208ENST00000504849 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
RFC1-208ENST00000504849 C8orf87E5RJ46 101 aa2.73□□□□□ -1.97
RFC1-208ENST00000504849 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
RFC1-208ENST00000504849 C20orf197Q8N268 126 aa2.73□□□□□ -1.97
RFC1-208ENST00000504849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.73□□□□□ -1.974e-9■■■■■ 34.1
RFC1-208ENST00000504849 KLKP1Q107X0 134 aa2.72□□□□□ -1.97
RFC1-208ENST00000504849 LINC00575Q6W349 94 aa2.72□□□□□ -1.97
RFC1-208ENST00000504849 Q6ZQT0 140 aa2.72□□□□□ -1.97
RFC1-208ENST00000504849 MAPK1IP1LQ8NDC0 245 aa2.72□□□□□ -1.97
RFC1-208ENST00000504849 C11orf68Q9H3H3 251 aaKnown RBP2.72□□□□□ -1.97
RFC1-208ENST00000504849 WNK2Q9Y3S1 2297 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 BPY2O14599 106 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 ERC2-IT1O76042 136 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 HAMPP81172 84 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 Q5XG85 94 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.71□□□□□ -1.98
RFC1-208ENST00000504849 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 C15orf56Q8N910 161 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 CYSTM1Q9H1C7 97 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 RBM12B-AS1Q9P1G2 102 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 ANK2Q01484 3957 aa2.71□□□□□ -1.98
RFC1-208ENST00000504849 RYR1P21817 5038 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 PRRC2AP48634 2157 aaKnown RBP2.7□□□□□ -1.98
RFC1-208ENST00000504849 ABCA4P78363 2273 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 A0A1B0GVX0 72 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 DAD1P61803 113 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 C1orf195Q5TG92 126 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 WFDC9Q8NEX5 89 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 LINC01006Q8NI28 216 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms