RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
TPM3-217ENST00000504663 Q6ZSA8 131 aa6.53□□□□□ -1.36
TPM3-217ENST00000504663 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
TPM3-217ENST00000504663 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
TPM3-217ENST00000504663 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
TPM3-217ENST00000504663 PKIGQ9Y2B9 76 aa6.52□□□□□ -1.37
TPM3-217ENST00000504663 IGLV1-50A0A075B6I6 118 aa6.51□□□□□ -1.37
TPM3-217ENST00000504663 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
TPM3-217ENST00000504663 M0QXV9 152 aa6.51□□□□□ -1.37
TPM3-217ENST00000504663 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
TPM3-217ENST00000504663 OR13C6PQ8NH95 151 aa6.51□□□□□ -1.37
TPM3-217ENST00000504663 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
TPM3-217ENST00000504663 PLAC8Q9NZF1 115 aa6.51□□□□□ -1.37
TPM3-217ENST00000504663 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 A0A087WYN8 130 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 K7EP34 96 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 TCL1BO95988 128 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 SPRR1AP35321 89 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 Q1RN00 199 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
TPM3-217ENST00000504663 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
TPM3-217ENST00000504663 FABP2P12104 132 aa6.49□□□□□ -1.37
TPM3-217ENST00000504663 S100A7L2Q5SY68 101 aa6.49□□□□□ -1.37
TPM3-217ENST00000504663 CLEC2BQ92478 149 aa6.49□□□□□ -1.37
TPM3-217ENST00000504663 FAT1Q14517 4588 aa6.49□□□□□ -1.37
TPM3-217ENST00000504663 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
TPM3-217ENST00000504663 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
TPM3-217ENST00000504663 SPCS1Q9Y6A9 102 aa6.48□□□□□ -1.37
TPM3-217ENST00000504663 HSPG2P98160 4391 aa6.48□□□□□ -1.37
TPM3-217ENST00000504663 EPPK1P58107 5090 aaKnown RBP6.47□□□□□ -1.37
TPM3-217ENST00000504663 LST1O00453 97 aa6.47□□□□□ -1.37
TPM3-217ENST00000504663 ZNF73O43830 326 aaPredicted RBP6.47□□□□□ -1.37
TPM3-217ENST00000504663 PSMB2P49721 201 aa6.47□□□□□ -1.37
TPM3-217ENST00000504663 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
TPM3-217ENST00000504663 ELOF1P60002 83 aaKnown RBP6.46□□□□□ -1.38
TPM3-217ENST00000504663 VAMP3Q15836 100 aa6.46□□□□□ -1.38
TPM3-217ENST00000504663 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 TRBV7-6A0A0J9YX20 115 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 SCXQ7RTU7 201 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
TPM3-217ENST00000504663 H3BMG7 143 aa6.44□□□□□ -1.38
TPM3-217ENST00000504663 UBE2V1Q13404 147 aa6.44□□□□□ -1.38
TPM3-217ENST00000504663 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
TPM3-217ENST00000504663 TRBV20-1A0A075B6N2 111 aa6.43□□□□□ -1.38
TPM3-217ENST00000504663 HAMPP81172 84 aa6.43□□□□□ -1.38
TPM3-217ENST00000504663 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
TPM3-217ENST00000504663 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
TPM3-217ENST00000504663 RYR1P21817 5038 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 H0YGX0 51 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 COX6CP09669 75 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 SCGB1C2P0DMR2 95 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 ATXN8Q156A1 80 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 Q9BRP9 147 aa6.42□□□□□ -1.38
TPM3-217ENST00000504663 TRACP01848 142 aa6.41□□□□□ -1.38
TPM3-217ENST00000504663 COX7BP24311 80 aa6.41□□□□□ -1.38
TPM3-217ENST00000504663 Q6ZRX8 168 aa6.41□□□□□ -1.38
TPM3-217ENST00000504663 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
TPM3-217ENST00000504663 GTF2H5Q6ZYL4 71 aa6.4□□□□□ -1.38
TPM3-217ENST00000504663 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
TPM3-217ENST00000504663 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
TPM3-217ENST00000504663 A0A1B0GX51 115 aa6.39□□□□□ -1.39
TPM3-217ENST00000504663 XGP55808 180 aa6.39□□□□□ -1.39
TPM3-217ENST00000504663 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
TPM3-217ENST00000504663 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
TPM3-217ENST00000504663 UBE2BP63146 152 aa6.38□□□□□ -1.39
TPM3-217ENST00000504663 C9JAW5 83 aa6.37□□□□□ -1.39
TPM3-217ENST00000504663 BCE1O60756 84 aa6.37□□□□□ -1.39
TPM3-217ENST00000504663 LINC01547P58512 204 aaPredicted RBP6.37□□□□□ -1.39
TPM3-217ENST00000504663 PRLHP81277 87 aa6.37□□□□□ -1.39
TPM3-217ENST00000504663 ETDCA0A1B0GVM5 59 aa6.36□□□□□ -1.39
TPM3-217ENST00000504663 hADV29S1A0JD25 119 aa6.36□□□□□ -1.39
TPM3-217ENST00000504663 H0Y9J4 135 aa6.36□□□□□ -1.39
TPM3-217ENST00000504663 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
TPM3-217ENST00000504663 DPH3Q96FX2 82 aa6.36□□□□□ -1.39
TPM3-217ENST00000504663 SLC25A20O43772 301 aa6.35□□□□□ -1.39
TPM3-217ENST00000504663 FAM19A1Q7Z5A9 133 aa6.35□□□□□ -1.39
TPM3-217ENST00000504663 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
TPM3-217ENST00000504663 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
TPM3-217ENST00000504663 H3BT86 120 aa6.34□□□□□ -1.39
TPM3-217ENST00000504663 KRTAP10-4P60372 401 aaPredicted RBP6.34□□□□□ -1.39
TPM3-217ENST00000504663 Q6ZQY7 126 aa6.34□□□□□ -1.39
TPM3-217ENST00000504663 IGLV5-48A0A075B6I7 105 aa6.33□□□□□ -1.4
TPM3-217ENST00000504663 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
TPM3-217ENST00000504663 F8W1H4 67 aa6.33□□□□□ -1.4
TPM3-217ENST00000504663 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.33□□□□□ -1.4
TPM3-217ENST00000504663 ST20-AS1Q8NBB2 130 aa6.33□□□□□ -1.4
TPM3-217ENST00000504663 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
TPM3-217ENST00000504663 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
TPM3-217ENST00000504663 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
TPM3-217ENST00000504663 BAALC-AS2P0C853 105 aa6.31□□□□□ -1.4
TPM3-217ENST00000504663 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
TPM3-217ENST00000504663 GAGE2AQ6NT46 116 aa6.31□□□□□ -1.4
TPM3-217ENST00000504663 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
TPM3-217ENST00000504663 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms