RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PCOTHQ58A44 107 aa2.34□□□□□ -2.04
NIPBL-204ENST00000504430 LRRC37A2A6NM11 1700 aa2.33□□□□□ -2.04
NIPBL-204ENST00000504430 COX6B1P14854 86 aa2.33□□□□□ -2.04
NIPBL-204ENST00000504430 SPINK9Q5DT21 86 aa2.32□□□□□ -2.04
NIPBL-204ENST00000504430 LINC01590Q5TEZ4 76 aa2.32□□□□□ -2.04
NIPBL-204ENST00000504430 C2CD3Q4AC94 2353 aa2.32□□□□□ -2.04
NIPBL-204ENST00000504430 UNQ6190/PRO20217Q6UXQ8 127 aa2.32□□□□□ -2.04
NIPBL-204ENST00000504430 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
NIPBL-204ENST00000504430 DEFB106AQ8N104 65 aa2.31□□□□□ -2.04
NIPBL-204ENST00000504430 PRO3102Q9H379 93 aa2.3□□□□□ -2.04
NIPBL-204ENST00000504430 SPTBN1Q01082 2364 aaKnown RBP2.3□□□□□ -2.04
NIPBL-204ENST00000504430 C10orf99Q6UWK7 81 aa2.3□□□□□ -2.04
NIPBL-204ENST00000504430 DSPP15924 2871 aaKnown RBP2.3□□□□□ -2.04
NIPBL-204ENST00000504430 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
NIPBL-204ENST00000504430 A0A0C4DFX4 3053 aa2.29□□□□□ -2.04
NIPBL-204ENST00000504430 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
NIPBL-204ENST00000504430 KCNQ1DNQ9H478 68 aa2.29□□□□□ -2.04
NIPBL-204ENST00000504430 ETDCA0A1B0GVM5 59 aa2.28□□□□□ -2.04
NIPBL-204ENST00000504430 LRRC37AA6NMS7 1700 aa2.28□□□□□ -2.04
NIPBL-204ENST00000504430 PTPRQQ9UMZ3 2332 aa2.28□□□□□ -2.04
NIPBL-204ENST00000504430 UBE2DNLQ8IWF7 75 aa2.28□□□□□ -2.04
NIPBL-204ENST00000504430 GVINP1Q7Z2Y8 2422 aa2.28□□□□□ -2.04
NIPBL-204ENST00000504430 LELP1Q5T871 98 aa2.27□□□□□ -2.05
NIPBL-204ENST00000504430 USF3Q68DE3 2245 aa2.27□□□□□ -2.05
NIPBL-204ENST00000504430 CELSR2Q9HCU4 2923 aa2.27□□□□□ -2.05
NIPBL-204ENST00000504430 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
NIPBL-204ENST00000504430 SPTBN2O15020 2390 aa2.26□□□□□ -2.05
NIPBL-204ENST00000504430 TRANK1O15050 2925 aa2.26□□□□□ -2.05
NIPBL-204ENST00000504430 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
NIPBL-204ENST00000504430 PTPRZ1P23471 2315 aaPredicted RBP2.26□□□□□ -2.05
NIPBL-204ENST00000504430 ZNF462Q96JM2 2506 aa2.25□□□□□ -2.05
NIPBL-204ENST00000504430 SPTY2D1-AS1A0A0U1RR47 76 aa2.25□□□□□ -2.05
NIPBL-204ENST00000504430 PIGYQ3MUY2 71 aa2.25□□□□□ -2.05
NIPBL-204ENST00000504430 A0A0G2JMZ2 1700 aa2.25□□□□□ -2.05
NIPBL-204ENST00000504430 ZNF292O60281 2723 aa2.24□□□□□ -2.05
NIPBL-204ENST00000504430 LINC01546A6NGU7 62 aa2.24□□□□□ -2.05
NIPBL-204ENST00000504430 F8P00451 2351 aa2.24□□□□□ -2.05
NIPBL-204ENST00000504430 TNRC6CQ9HCJ0 1690 aaKnown RBP2.24□□□□□ -2.05
NIPBL-204ENST00000504430 CDKN2A-AS1Q9UH64 79 aa2.23□□□□□ -2.05
NIPBL-204ENST00000504430 IGF2RP11717 2491 aa2.23□□□□□ -2.05
NIPBL-204ENST00000504430 SMIM2Q9BVW6 85 aa2.23□□□□□ -2.05
NIPBL-204ENST00000504430 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
NIPBL-204ENST00000504430 ANGP03950 147 aaKnown RBP2.22□□□□□ -2.05
NIPBL-204ENST00000504430 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 LINC00575Q6W349 94 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 PKDREJQ9NTG1 2253 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 LEAP2Q969E1 77 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 ROS1P08922 2347 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 DEFB104AQ8WTQ1 72 aa2.21□□□□□ -2.06
NIPBL-204ENST00000504430 CACNA1HO95180 2353 aa2.2□□□□□ -2.06
NIPBL-204ENST00000504430 STATHP02808 62 aa2.2□□□□□ -2.06
NIPBL-204ENST00000504430 H0YGX0 51 aa2.2□□□□□ -2.06
NIPBL-204ENST00000504430 I3L2K1 104 aa2.2□□□□□ -2.06
NIPBL-204ENST00000504430 ABCA12Q86UK0 2595 aa2.2□□□□□ -2.06
NIPBL-204ENST00000504430 CHD9Q3L8U1 2897 aa2.19□□□□□ -2.06
NIPBL-204ENST00000504430 SPINK13Q1W4C9 94 aa2.19□□□□□ -2.06
NIPBL-204ENST00000504430 LINC00308Q8TCZ7 52 aa2.19□□□□□ -2.06
NIPBL-204ENST00000504430 LINC00158P58513 81 aa2.18□□□□□ -2.06
NIPBL-204ENST00000504430 RPL39P62891 51 aaKnown RBP2.18□□□□□ -2.06
NIPBL-204ENST00000504430 K7EQZ3 153 aa2.18□□□□□ -2.06
NIPBL-204ENST00000504430 RPL39LQ96EH5 51 aaKnown RBP2.17□□□□□ -2.06
NIPBL-204ENST00000504430 WNK2Q9Y3S1 2297 aa2.17□□□□□ -2.06
NIPBL-204ENST00000504430 DEFB114Q30KQ6 69 aa2.17□□□□□ -2.06
NIPBL-204ENST00000504430 HIVEP2P31629 2446 aa2.15□□□□□ -2.06
NIPBL-204ENST00000504430 TPRP12270 2363 aaKnown RBP2.15□□□□□ -2.07
NIPBL-204ENST00000504430 CNFNQ9BYD5 112 aa2.14□□□□□ -2.07
NIPBL-204ENST00000504430 HELZ2Q9BYK8 2649 aaKnown RBP2.14□□□□□ -2.07
NIPBL-204ENST00000504430 LYNX1P0DP58 116 aa2.14□□□□□ -2.07
NIPBL-204ENST00000504430 KRTAP21-3Q3LHN1 58 aa2.14□□□□□ -2.07
NIPBL-204ENST00000504430 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
NIPBL-204ENST00000504430 GOLGB1Q14789 3259 aaKnown RBP2.13□□□□□ -2.07
NIPBL-204ENST00000504430 DEFB108AA8MXU0 73 aa2.13□□□□□ -2.07
NIPBL-204ENST00000504430 K7EIL1 84 aa2.13□□□□□ -2.07
NIPBL-204ENST00000504430 NDUFA1O15239 70 aa2.13□□□□□ -2.07
NIPBL-204ENST00000504430 TP53AIP1Q9HCN2 124 aa2.13□□□□□ -2.07
NIPBL-204ENST00000504430 DEFB131BA0A096LNP1 70 aa2.12□□□□□ -2.07
NIPBL-204ENST00000504430 MGAQ8IWI9 3026 aa2.12□□□□□ -2.07
NIPBL-204ENST00000504430 NCOR1O75376 2440 aa2.11□□□□□ -2.07
NIPBL-204ENST00000504430 H0YAA0 97 aa2.11□□□□□ -2.07
NIPBL-204ENST00000504430 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
NIPBL-204ENST00000504430 SRCAPQ6ZRS2 3230 aa2.11□□□□□ -2.07
NIPBL-204ENST00000504430 PRCDQ00LT1 54 aa2.11□□□□□ -2.07
NIPBL-204ENST00000504430 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
NIPBL-204ENST00000504430 CACNA1AO00555 2505 aa2.1□□□□□ -2.07
NIPBL-204ENST00000504430 COX6A2Q02221 97 aa2.1□□□□□ -2.07
NIPBL-204ENST00000504430 POLQO75417 2590 aa2.1□□□□□ -2.07
NIPBL-204ENST00000504430 RP1L1Q8IWN7 2480 aaPredicted RBP2.1□□□□□ -2.07
NIPBL-204ENST00000504430 ALMS1Q8TCU4 4167 aa2.1□□□□□ -2.07
NIPBL-204ENST00000504430 RPL39P5Q59GN2 51 aa2.1□□□□□ -2.07
NIPBL-204ENST00000504430 PKD1L2Q7Z442 2459 aa2.09□□□□□ -2.07
NIPBL-204ENST00000504430 COL6A3P12111 3177 aa2.09□□□□□ -2.08
NIPBL-204ENST00000504430 POLR2KP53803 58 aaKnown RBP2.08□□□□□ -2.08
NIPBL-204ENST00000504430 Q8IZM0 81 aa2.08□□□□□ -2.08
NIPBL-204ENST00000504430 KRTAP13-1Q8IUC0 172 aa2.08□□□□□ -2.08
NIPBL-204ENST00000504430 DEFB123Q8N688 67 aa2.08□□□□□ -2.08
NIPBL-204ENST00000504430 PCNTO95613 3336 aa2.07□□□□□ -2.08
NIPBL-204ENST00000504430 TOMM7Q9P0U1 55 aa2.07□□□□□ -2.08
NIPBL-204ENST00000504430 APELAP0DMC3 54 aa2.06□□□□□ -2.08
NIPBL-204ENST00000504430 WFDC13Q8IUB5 93 aa2.06□□□□□ -2.08
NIPBL-204ENST00000504430 APLNQ9ULZ1 77 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms