RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
PDLIM7-211ENST00000504318 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
PDLIM7-211ENST00000504318 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.07
PDLIM7-211ENST00000504318 A4D1N5 150 aa8.33□□□□□ -1.08
PDLIM7-211ENST00000504318 K7ERJ3 54 aa8.33□□□□□ -1.08
PDLIM7-211ENST00000504318 COX17Q14061 63 aa8.33□□□□□ -1.08
PDLIM7-211ENST00000504318 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
PDLIM7-211ENST00000504318 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
PDLIM7-211ENST00000504318 LINC00158P58513 81 aa8.32□□□□□ -1.08
PDLIM7-211ENST00000504318 RAB37Q96AX2 223 aa8.32□□□□□ -1.08
PDLIM7-211ENST00000504318 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
PDLIM7-211ENST00000504318 BCE1O60756 84 aa8.31□□□□□ -1.08
PDLIM7-211ENST00000504318 VAMP3Q15836 100 aa8.31□□□□□ -1.08
PDLIM7-211ENST00000504318 Q8NDZ9 215 aa8.31□□□□□ -1.08
PDLIM7-211ENST00000504318 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
PDLIM7-211ENST00000504318 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
PDLIM7-211ENST00000504318 H3BUT2 72 aa8.3□□□□□ -1.08
PDLIM7-211ENST00000504318 CFC1BP0CG36 223 aa8.3□□□□□ -1.08
PDLIM7-211ENST00000504318 CFC1P0CG37 223 aa8.3□□□□□ -1.08
PDLIM7-211ENST00000504318 LYRM7Q5U5X0 104 aa8.3□□□□□ -1.08
PDLIM7-211ENST00000504318 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
PDLIM7-211ENST00000504318 FABP2P12104 132 aa8.29□□□□□ -1.08
PDLIM7-211ENST00000504318 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
PDLIM7-211ENST00000504318 DAND5Q8N907 189 aa8.29□□□□□ -1.08
PDLIM7-211ENST00000504318 A0A087X002 238 aa8.28□□□□□ -1.08
PDLIM7-211ENST00000504318 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
PDLIM7-211ENST00000504318 A0A1W2PPM0 123 aa8.28□□□□□ -1.08
PDLIM7-211ENST00000504318 VPREB1P12018 145 aa8.28□□□□□ -1.08
PDLIM7-211ENST00000504318 PFN2P35080 140 aa8.27□□□□□ -1.09
PDLIM7-211ENST00000504318 NPC2P61916 151 aa8.27□□□□□ -1.09
PDLIM7-211ENST00000504318 GTF2H5Q6ZYL4 71 aa8.27□□□□□ -1.09
PDLIM7-211ENST00000504318 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
PDLIM7-211ENST00000504318 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
PDLIM7-211ENST00000504318 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
PDLIM7-211ENST00000504318 TSPAN13O95857 204 aa8.25□□□□□ -1.09
PDLIM7-211ENST00000504318 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
PDLIM7-211ENST00000504318 TRAV13-2A0A0B4J235 113 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 Q1RN00 199 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 SPCS1Q9Y6A9 102 aa8.24□□□□□ -1.09
PDLIM7-211ENST00000504318 K7EP34 96 aa8.23□□□□□ -1.09
PDLIM7-211ENST00000504318 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
PDLIM7-211ENST00000504318 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
PDLIM7-211ENST00000504318 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
PDLIM7-211ENST00000504318 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
PDLIM7-211ENST00000504318 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
PDLIM7-211ENST00000504318 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
PDLIM7-211ENST00000504318 M0R378 163 aa8.21□□□□□ -1.1
PDLIM7-211ENST00000504318 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.1
PDLIM7-211ENST00000504318 NDUFC2O95298 119 aa8.21□□□□□ -1.1
PDLIM7-211ENST00000504318 PSMB2P49721 201 aa8.21□□□□□ -1.1
PDLIM7-211ENST00000504318 TRBV20-1A0A075B6N2 111 aa8.2□□□□□ -1.1
PDLIM7-211ENST00000504318 COX6CP09669 75 aa8.2□□□□□ -1.1
PDLIM7-211ENST00000504318 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
PDLIM7-211ENST00000504318 H7C2G1 150 aa8.19□□□□□ -1.1
PDLIM7-211ENST00000504318 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
PDLIM7-211ENST00000504318 PRLHP81277 87 aa8.18□□□□□ -1.1
PDLIM7-211ENST00000504318 CRYGAP11844 174 aa8.17□□□□□ -1.1
PDLIM7-211ENST00000504318 UBE2AP49459 152 aa8.16□□□□□ -1.1
PDLIM7-211ENST00000504318 FAM229BQ4G0N7 80 aa8.16□□□□□ -1.1
PDLIM7-211ENST00000504318 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
PDLIM7-211ENST00000504318 TRBV10-2A0A0K0K1G8 114 aa8.14□□□□□ -1.11
PDLIM7-211ENST00000504318 TRIAP1O43715 76 aa8.14□□□□□ -1.11
PDLIM7-211ENST00000504318 FAM19A1Q7Z5A9 133 aa8.14□□□□□ -1.11
PDLIM7-211ENST00000504318 LINC00337Q8N6G1 96 aa8.14□□□□□ -1.11
PDLIM7-211ENST00000504318 MUC2Q02817 5179 aa8.14□□□□□ -1.11
PDLIM7-211ENST00000504318 KRTAP4-16G5E9R7 235 aaPredicted RBP8.13□□□□□ -1.11
PDLIM7-211ENST00000504318 SPRR1AP35321 89 aa8.13□□□□□ -1.11
PDLIM7-211ENST00000504318 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
PDLIM7-211ENST00000504318 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
PDLIM7-211ENST00000504318 CBY1Q9Y3M2 126 aa8.12□□□□□ -1.11
PDLIM7-211ENST00000504318 F8W1H4 67 aa8.11□□□□□ -1.11
PDLIM7-211ENST00000504318 PRR4Q16378 134 aa8.11□□□□□ -1.11
PDLIM7-211ENST00000504318 H3BMG7 143 aa8.1□□□□□ -1.11
PDLIM7-211ENST00000504318 TCL1BO95988 128 aa8.1□□□□□ -1.11
PDLIM7-211ENST00000504318 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
PDLIM7-211ENST00000504318 KCNQ1DNQ9H478 68 aa8.1□□□□□ -1.11
PDLIM7-211ENST00000504318 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
PDLIM7-211ENST00000504318 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
PDLIM7-211ENST00000504318 H0YGX0 51 aa8.08□□□□□ -1.12
PDLIM7-211ENST00000504318 PRYO14603 147 aa8.08□□□□□ -1.12
PDLIM7-211ENST00000504318 NCR3O14931 201 aa8.08□□□□□ -1.12
PDLIM7-211ENST00000504318 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
PDLIM7-211ENST00000504318 LST1O00453 97 aa8.07□□□□□ -1.12
PDLIM7-211ENST00000504318 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
PDLIM7-211ENST00000504318 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
PDLIM7-211ENST00000504318 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
PDLIM7-211ENST00000504318 TRACP01848 142 aa8.05□□□□□ -1.12
PDLIM7-211ENST00000504318 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
PDLIM7-211ENST00000504318 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
PDLIM7-211ENST00000504318 SNCGO76070 127 aa8.04□□□□□ -1.12
PDLIM7-211ENST00000504318 CLEC2BQ92478 149 aa8.04□□□□□ -1.12
PDLIM7-211ENST00000504318 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
PDLIM7-211ENST00000504318 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
PDLIM7-211ENST00000504318 MUC17Q685J3 4493 aa8.03□□□□□ -1.12
PDLIM7-211ENST00000504318 C9JAW5 83 aa8.03□□□□□ -1.12
PDLIM7-211ENST00000504318 A0A1B0GX51 115 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms