RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
NUP54-203ENST00000504173 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
NUP54-203ENST00000504173 TRBV10-3A0A0K0K1G6 114 aa6.17□□□□□ -1.42
NUP54-203ENST00000504173 DDTP30046 118 aa6.17□□□□□ -1.42
NUP54-203ENST00000504173 C2orf91Q6ZV80 131 aa6.17□□□□□ -1.42
NUP54-203ENST00000504173 UQCR10Q9UDW1 63 aa6.17□□□□□ -1.42
NUP54-203ENST00000504173 PRYO14603 147 aa6.16□□□□□ -1.42
NUP54-203ENST00000504173 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
NUP54-203ENST00000504173 LINC00518Q8N0U6 118 aa6.16□□□□□ -1.42
NUP54-203ENST00000504173 OR13C6PQ8NH95 151 aa6.16□□□□□ -1.42
NUP54-203ENST00000504173 BCE1O60756 84 aa6.15□□□□□ -1.42
NUP54-203ENST00000504173 IGLV7-43P04211 117 aa6.15□□□□□ -1.42
NUP54-203ENST00000504173 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
NUP54-203ENST00000504173 A4D1N5 150 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 IGLV6-57P01721 117 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 HNRNPA3P51991 378 aaKnown RBP6.14□□□□□ -1.43
NUP54-203ENST00000504173 TAL2Q16559 108 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 C12orf57Q99622 126 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 CBY1Q9Y3M2 126 aa6.14□□□□□ -1.43
NUP54-203ENST00000504173 UBE2AP49459 152 aa6.13□□□□□ -1.43
NUP54-203ENST00000504173 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
NUP54-203ENST00000504173 TRAV23DV6A0A075B6W5 121 aa6.12□□□□□ -1.43
NUP54-203ENST00000504173 A6NDN8 102 aa6.12□□□□□ -1.43
NUP54-203ENST00000504173 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
NUP54-203ENST00000504173 HSD52Q0P140 79 aa6.12□□□□□ -1.43
NUP54-203ENST00000504173 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
NUP54-203ENST00000504173 CEND1Q8N111 149 aa6.12□□□□□ -1.43
NUP54-203ENST00000504173 TRAV13-2A0A0B4J235 113 aa6.11□□□□□ -1.43
NUP54-203ENST00000504173 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
NUP54-203ENST00000504173 ZNF861PO60384 105 aa6.11□□□□□ -1.43
NUP54-203ENST00000504173 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
NUP54-203ENST00000504173 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
NUP54-203ENST00000504173 TSTD3H0UI37 97 aa6.1□□□□□ -1.43
NUP54-203ENST00000504173 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
NUP54-203ENST00000504173 SPRR1AP35321 89 aa6.1□□□□□ -1.43
NUP54-203ENST00000504173 PRLHP81277 87 aa6.1□□□□□ -1.43
NUP54-203ENST00000504173 DIRC1Q969H9 104 aa6.1□□□□□ -1.43
NUP54-203ENST00000504173 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
NUP54-203ENST00000504173 A6NJY4 79 aa6.09□□□□□ -1.43
NUP54-203ENST00000504173 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
NUP54-203ENST00000504173 RAB37Q96AX2 223 aa6.09□□□□□ -1.43
NUP54-203ENST00000504173 KRTAP4-16G5E9R7 235 aaPredicted RBP6.08□□□□□ -1.44
NUP54-203ENST00000504173 H0Y9J4 135 aa6.08□□□□□ -1.44
NUP54-203ENST00000504173 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
NUP54-203ENST00000504173 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
NUP54-203ENST00000504173 FXYD2P54710 66 aa6.08□□□□□ -1.44
NUP54-203ENST00000504173 A0A0B4J2C4 111 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 B5MCH6 92 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 CFC1P0CG37 223 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 C6orf99Q4VX62 202 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
NUP54-203ENST00000504173 Q6ZRX8 168 aa6.06□□□□□ -1.44
NUP54-203ENST00000504173 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
NUP54-203ENST00000504173 H7C2G1 150 aa6.05□□□□□ -1.44
NUP54-203ENST00000504173 COX7BP24311 80 aa6.05□□□□□ -1.44
NUP54-203ENST00000504173 CTAG1AP78358 180 aa6.05□□□□□ -1.44
NUP54-203ENST00000504173 NHP2Q9NX24 153 aaKnown RBP6.05□□□□□ -1.44
NUP54-203ENST00000504173 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 M0R143 59 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 ELOF1P60002 83 aaKnown RBP6.03□□□□□ -1.44
NUP54-203ENST00000504173 Q1RN00 199 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 BVES-AS1Q5T3Y7 98 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 Q9BRP9 147 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 CRCT1Q9UGL9 99 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 PRO1854Q9UHT4 67 aa6.03□□□□□ -1.44
NUP54-203ENST00000504173 A0A1B0GWB2 263 aa6.02□□□□□ -1.45
NUP54-203ENST00000504173 K7ERJ3 54 aa6.02□□□□□ -1.45
NUP54-203ENST00000504173 VAMP3Q15836 100 aa6.02□□□□□ -1.45
NUP54-203ENST00000504173 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
NUP54-203ENST00000504173 DHRS4-AS1Q9P1J3 65 aa6.01□□□□□ -1.45
NUP54-203ENST00000504173 ZNF706Q9Y5V0 76 aaPredicted RBP6.01□□□□□ -1.45
NUP54-203ENST00000504173 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
NUP54-203ENST00000504173 ERC2-IT1O76042 136 aa6□□□□□ -1.45
NUP54-203ENST00000504173 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
NUP54-203ENST00000504173 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
NUP54-203ENST00000504173 SPRR4Q96PI1 79 aa5.99□□□□□ -1.45
NUP54-203ENST00000504173 SLC25A20O43772 301 aa5.98□□□□□ -1.45
NUP54-203ENST00000504173 PSMB2P49721 201 aa5.97□□□□□ -1.45
NUP54-203ENST00000504173 BATFQ16520 125 aa5.97□□□□□ -1.45
NUP54-203ENST00000504173 GAGE2AQ6NT46 116 aa5.97□□□□□ -1.45
NUP54-203ENST00000504173 PRR26Q8N8Z3 221 aa5.97□□□□□ -1.45
NUP54-203ENST00000504173 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
NUP54-203ENST00000504173 TRIAP1O43715 76 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 TSPAN13O95857 204 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 CRYGAP11844 174 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 LINC00575Q6W349 94 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
NUP54-203ENST00000504173 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
NUP54-203ENST00000504173 hADV29S1A0JD25 119 aa5.95□□□□□ -1.46
NUP54-203ENST00000504173 H0YGX0 51 aa5.95□□□□□ -1.46
NUP54-203ENST00000504173 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
NUP54-203ENST00000504173 A0A087X002 238 aa5.94□□□□□ -1.46
NUP54-203ENST00000504173 COX6CP09669 75 aa5.94□□□□□ -1.46
NUP54-203ENST00000504173 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
NUP54-203ENST00000504173 SNCGO76070 127 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms