RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 A0A1B0GUV1 79 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 RUSC1-AS1Q66K80 236 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 Q6ZQY7 126 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 C7orf65Q6ZTY9 151 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGLV5-37A0A075B6J1 123 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 GVQW2A0A096LPI5 108 aaPredicted RBP1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-66A0A0C4DH42 116 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 KRTAP4-16G5E9R7 235 aaPredicted RBP1.92□□□□□ -2.1
NEDD4-204ENST00000503468 SPRR1BP22528 89 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 SNURFQ9Y675 71 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGKV2-28A0A075B6P5 120 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGKV2D-28P01615 120 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 SPRR1AP35321 89 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 C5orf56Q8N8D9 126 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 MPLKIPQ8TAP9 179 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 HIGD2AQ9BW72 106 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV4-61A0A0C4DH41 118 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 LOC101927531A0A1B0GV80 90 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 EDN2P20800 178 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 ZFP36P26651 326 aaKnown RBP1.92□□□□□ -2.1
NEDD4-204ENST00000503468 SPINK13Q1W4C9 94 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 Q9BRP9 147 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 CYSTM1Q9H1C7 97 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.91□□□□□ -2.1
NEDD4-204ENST00000503468 A0A087WYN8 130 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 LINC00269Q8N2A0 174 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 LINC00208Q96KT6 92 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 Q9UF83 564 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 G3V318 75 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-23P01764 117 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 CASC2Q6XLA1 102 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 LINC00588Q9Y4M8 146 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 TRRAPQ9Y4A5 3859 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 UNQ9165/PRO28630Q6UXU0 137 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 TM2D3Q9BRN9 247 aa1.91□□□□□ -2.1
NEDD4-204ENST00000503468 A0A0J9YWU9 116 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 CHKB-CPT1BH3BT56 60 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 H3BUX3 64 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 M0R378 163 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-11P01762 117 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV4-30-4P0DP06 118 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 Q6YL49 198 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-38A0A0C4DH36 116 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 A6NED7 52 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 ZNF73O43830 326 aaPredicted RBP1.9□□□□□ -2.1
NEDD4-204ENST00000503468 RNASE1P07998 156 aaKnown RBP1.9□□□□□ -2.1
NEDD4-204ENST00000503468 UBE2E2Q96LR5 201 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 KCNQ1DNQ9H478 68 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 CUBNO60494 3623 aa1.9□□□□□ -2.1
NEDD4-204ENST00000503468 TNXBP22105 4242 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 RPL37AP8A6NKH3 93 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 AVPP01185 164 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 PLA2G2AP14555 144 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 Q6ZSV7 163 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 IGLV8-61A0A075B6I0 122 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 PRM2P04554 102 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 SPATA3Q8NHX4 192 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 CDC42SE1Q9NRR8 79 aa1.9□□□□□ -2.11
NEDD4-204ENST00000503468 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 IGLV1-51P01701 117 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 DEFB131AP59861 70 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 Q6ZTC4 211 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 NOTCH2NLQ7Z3S9 236 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
NEDD4-204ENST00000503468 B9D2Q9BPU9 175 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 VPS13CQ709C8 3753 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 PLA2G1BP04054 148 aaKnown RBP1.89□□□□□ -2.11
NEDD4-204ENST00000503468 TNP2Q05952 138 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 Q75L30 129 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 C1orf64Q8NEQ6 169 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 PLA2G2DQ9UNK4 145 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-204ENST00000503468 DHRS4-AS1Q9P1J3 65 aa1.89□□□□□ -2.11
NEDD4-204ENST00000503468 APOC4P55056 127 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 SYCNQ0VAF6 134 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 C9orf116Q5BN46 136 aaPredicted RBP1.88□□□□□ -2.11
NEDD4-204ENST00000503468 Q8NBF4 154 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 C16orf74Q96GX8 76 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 LAMA5O15230 3695 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 TRAV10A0A0B4J240 114 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 Q6ZTI0 123 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 IGLV5-48A0A075B6I7 105 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 LINC00959A0A1B0GUT2 108 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 PSCAO43653 123 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 SPAG11BQ08648 103 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 DEFB109BQ30KR1 87 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 RNASE13Q5GAN3 156 aaKnown RBP1.88□□□□□ -2.11
NEDD4-204ENST00000503468 IGLV6-57P01721 117 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 Q6ZRN7 208 aaPredicted RBP1.88□□□□□ -2.11
NEDD4-204ENST00000503468 Q8N9P0 234 aaPredicted RBP1.88□□□□□ -2.11
NEDD4-204ENST00000503468 PRO0255Q9UI72 69 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 LRP2P98164 4655 aa1.88□□□□□ -2.11
NEDD4-204ENST00000503468 LCE2AQ5TA79 106 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms