RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	C14orf144	Q96I85	54 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801	TP73-AS1	Q9UF72	201 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801	TMEM238	C9JI98	176 aa		4.61	□□□□□ -1.67
GARNL3-222	ENST00000498801	DLEU1	O43261	78 aa		4.61	□□□□□ -1.67
GARNL3-222	ENST00000498801	KRTAP10-4	P60372	401 aa	Predicted RBP	4.61	□□□□□ -1.67
GARNL3-222	ENST00000498801	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.61	□□□□□ -1.67
GARNL3-222	ENST00000498801	SLC25A34	Q6PIV7	304 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801		Q8N377	158 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801	LINC00308	Q8TCZ7	52 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801	MIEN1	Q9BRT3	115 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801	SPANXD	Q9BXN6	97 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801	SPANXC	Q9NY87	97 aa		4.6	□□□□□ -1.67
GARNL3-222	ENST00000498801	LOC107984156	A0A0G2JMH3	177 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	KRTAP16-1	A8MUX0	517 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801		M0QXV9	152 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	NPC2	P61916	151 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801		Q5VSD8	79 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	SOSTDC1	Q6X4U4	206 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801		Q6ZVH6	145 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	ARL17A	Q8IVW1	177 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	NKAPP1	Q8N9T2	125 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801		Q8NDZ9	215 aa		4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.59	□□□□□ -1.67
GARNL3-222	ENST00000498801	SRRM2	Q9UQ35	2752 aa	Known RBP	4.58	□□□□□ -1.68
GARNL3-222	ENST00000498801	PHF5A	Q7RTV0	110 aa	Known RBP	4.58	□□□□□ -1.68
GARNL3-222	ENST00000498801	MRPL55	Q7Z7F7	128 aa	Known RBP	4.58	□□□□□ -1.68
GARNL3-222	ENST00000498801	COPS9	Q8WXC6	57 aa		4.58	□□□□□ -1.68
GARNL3-222	ENST00000498801	C22orf24	Q9Y442	160 aa		4.58	□□□□□ -1.68
GARNL3-222	ENST00000498801	SMR3B	P02814	79 aa	Predicted RBP	4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	IFITM1	P13164	125 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	PRR3	P79522	188 aa	Known RBP	4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	C2orf91	Q6ZV80	131 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	C7orf33	Q8WU49	177 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	C12orf57	Q99622	126 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	PPDPF	Q9H3Y8	114 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	HIGD1B	Q9P298	99 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801	UQCR10	Q9UDW1	63 aa		4.57	□□□□□ -1.68
GARNL3-222	ENST00000498801		M0R378	163 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	NCR3	O14931	201 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	NDUFC2	O95298	119 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	UBE2B	P63146	152 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	MUSTN1	Q8IVN3	82 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	LINC00167	Q96N53	147 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	HIST1H4G	Q99525	98 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	PRO1933	Q9H354	126 aa		4.56	□□□□□ -1.68
GARNL3-222	ENST00000498801	DNAH8	Q96JB1	4490 aa		4.55	□□□□□ -1.68
GARNL3-222	ENST00000498801	KRTAP11-1	Q8IUC1	163 aa		4.55	□□□□□ -1.68
GARNL3-222	ENST00000498801	IGKV2-28	A0A075B6P5	120 aa		4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	TRBV10-2	A0A0K0K1G8	114 aa		4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	RPL37AP8	A6NKH3	93 aa		4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	IGKV2D-28	P01615	120 aa		4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	RPL37A	P61513	92 aa	Known RBP	4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	TAL2	Q16559	108 aa		4.54	□□□□□ -1.68
GARNL3-222	ENST00000498801	PCLO	Q9Y6V0	5065 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	IGLV1-50	A0A075B6I6	118 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	TRBV10-3	A0A0K0K1G6	114 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	TSTD3	H0UI37	97 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	HNRNPA3	P51991	378 aa	Known RBP	4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	HSD52	Q0P140	79 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	PSORS1C2	Q9UIG4	136 aa		4.53	□□□□□ -1.68
GARNL3-222	ENST00000498801	ABCA13	Q86UQ4	5058 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	IGLV6-57	P01721	117 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	DDT	P30046	118 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	S100A7L2	Q5SY68	101 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	CEND1	Q8N111	149 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	LINC00337	Q8N6G1	96 aa		4.52	□□□□□ -1.69
GARNL3-222	ENST00000498801	FAT1	Q14517	4588 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	MYCBP2	O75592	4640 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	C1orf137	Q5JT78	98 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	REG3G	Q6UW15	175 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	OR13C6P	Q8NH95	151 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	KCNQ1DN	Q9H478	68 aa		4.51	□□□□□ -1.69
GARNL3-222	ENST00000498801	VPS13B	Q7Z7G8	4022 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	TRAV23DV6	A0A075B6W5	121 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	TRAV13-2	A0A0B4J235	113 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801		A6NDN8	102 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	INAFM2	P0DMQ5	153 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	TMEM126A	Q9H061	195 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	CBY1	Q9Y3M2	126 aa		4.5	□□□□□ -1.69
GARNL3-222	ENST00000498801	BCE1	O60756	84 aa		4.49	□□□□□ -1.69
GARNL3-222	ENST00000498801	IGLV7-43	P04211	117 aa		4.49	□□□□□ -1.69
GARNL3-222	ENST00000498801	FXYD2	P54710	66 aa		4.49	□□□□□ -1.69
GARNL3-222	ENST00000498801		A0A0B4J2C4	111 aa		4.48	□□□□□ -1.69
GARNL3-222	ENST00000498801	ZNF73	O43830	326 aa	Predicted RBP	4.48	□□□□□ -1.69
GARNL3-222	ENST00000498801	SPRR1A	P35321	89 aa		4.48	□□□□□ -1.69
GARNL3-222	ENST00000498801	CTAG1A	P78358	180 aa		4.48	□□□□□ -1.69
GARNL3-222	ENST00000498801	RAB37	Q96AX2	223 aa		4.48	□□□□□ -1.69
GARNL3-222	ENST00000498801	ETDC	A0A1B0GVM5	59 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801		M0R143	59 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	OXT	P01178	125 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	RPL13A	P40429	203 aa	Known RBP	4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	RPL28	P46779	137 aa	Known RBP	4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	UBE2A	P49459	152 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	BVES-AS1	Q5T3Y7	98 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	FAM19A1	Q7Z5A9	133 aa		4.47	□□□□□ -1.69
GARNL3-222	ENST00000498801	ZNF861P	O60384	105 aa		4.46	□□□□□ -1.7
GARNL3-222	ENST00000498801	HINT1	P49773	126 aa	Predicted RBP	4.46	□□□□□ -1.7
GARNL3-222	ENST00000498801	PRLH	P81277	87 aa		4.46	□□□□□ -1.7
GARNL3-222	ENST00000498801	C6orf99	Q4VX62	202 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms