RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 DDTP30046 118 aa4.9□□□□□ -1.63
HMGXB4-207ENST00000498212 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.63
HMGXB4-207ENST00000498212 E9PLD3 99 aa4.89□□□□□ -1.63
HMGXB4-207ENST00000498212 NDUFC2O95298 119 aa4.89□□□□□ -1.63
HMGXB4-207ENST00000498212 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
HMGXB4-207ENST00000498212 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-207ENST00000498212 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 B5MCH6 92 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BKO60814 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BJP06899 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BOP23527 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BBP33778 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BDP58876 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BCP62807 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST2H2BEQ16778 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 S100A7L2Q5SY68 101 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BHQ93079 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BNQ99877 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 HIST1H2BMQ99879 126 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 PPDPFQ9H3Y8 114 aa4.88□□□□□ -1.63
HMGXB4-207ENST00000498212 SYS1-DBNDD2H3BUS1 97 aa4.87□□□□□ -1.63
HMGXB4-207ENST00000498212 NPC2P61916 151 aa4.87□□□□□ -1.63
HMGXB4-207ENST00000498212 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 TRAV23DV6A0A075B6W5 121 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 ERC2-IT1O76042 136 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 LINC00483Q53H64 154 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 SOSTDC1Q6X4U4 206 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 Q6ZRX8 168 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 Q8NBF4 154 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 Q9BRP9 147 aa4.86□□□□□ -1.63
HMGXB4-207ENST00000498212 JOSD1Q15040 202 aaPredicted RBP4.85□□□□□ -1.63
HMGXB4-207ENST00000498212 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
HMGXB4-207ENST00000498212 CDIP1Q9H305 208 aa4.85□□□□□ -1.63
HMGXB4-207ENST00000498212 IGLV9-49A0A0B4J1Y8 123 aa4.84□□□□□ -1.63
HMGXB4-207ENST00000498212 MOBPQ13875 183 aa4.84□□□□□ -1.63
HMGXB4-207ENST00000498212 TMA7Q9Y2S6 64 aaKnown RBP4.84□□□□□ -1.63
HMGXB4-207ENST00000498212 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.63
HMGXB4-207ENST00000498212 A0A0U1RQV1 116 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 ZNF73O43830 326 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 TIMM17BO60830 172 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 SPINK1P00995 79 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 C3orf79P0CE67 100 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 LINC00308Q8TCZ7 52 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 LITAFQ99732 161 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
HMGXB4-207ENST00000498212 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
HMGXB4-207ENST00000498212 OR13C6PQ8NH95 151 aa4.82□□□□□ -1.64
HMGXB4-207ENST00000498212 KRTDAPP60985 99 aa4.81□□□□□ -1.64
HMGXB4-207ENST00000498212 COA6Q5JTJ3 125 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-207ENST00000498212 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
HMGXB4-207ENST00000498212 TTTY13Q9BZ97 58 aa4.81□□□□□ -1.64
HMGXB4-207ENST00000498212 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-207ENST00000498212 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
HMGXB4-207ENST00000498212 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
HMGXB4-207ENST00000498212 C20orf202A1L168 122 aa4.79□□□□□ -1.64
HMGXB4-207ENST00000498212 C5orf52A6NGY3 159 aa4.79□□□□□ -1.64
HMGXB4-207ENST00000498212 LINC00518Q8N0U6 118 aa4.79□□□□□ -1.64
HMGXB4-207ENST00000498212 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
HMGXB4-207ENST00000498212 MUC2Q02817 5179 aa4.79□□□□□ -1.64
HMGXB4-207ENST00000498212 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
HMGXB4-207ENST00000498212 Q8N377 158 aa4.78□□□□□ -1.64
HMGXB4-207ENST00000498212 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
HMGXB4-207ENST00000498212 SLC25A20O43772 301 aa4.77□□□□□ -1.65
HMGXB4-207ENST00000498212 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
HMGXB4-207ENST00000498212 C6orf99Q4VX62 202 aa4.77□□□□□ -1.65
HMGXB4-207ENST00000498212 SLC25A34Q6PIV7 304 aa4.77□□□□□ -1.65
HMGXB4-207ENST00000498212 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
HMGXB4-207ENST00000498212 SPRR1BP22528 89 aa4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 COX7BP24311 80 aa4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 AKR1D1P51857 326 aa4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 ANKRD39Q53RE8 183 aa4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 ATOH7Q8N100 152 aa4.76□□□□□ -1.65
HMGXB4-207ENST00000498212 IFITM1P13164 125 aa4.75□□□□□ -1.65
HMGXB4-207ENST00000498212 Q6ZVH6 145 aa4.74□□□□□ -1.65
HMGXB4-207ENST00000498212 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
HMGXB4-207ENST00000498212 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
HMGXB4-207ENST00000498212 TRBV7-6A0A0J9YX20 115 aa4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 A6NDN8 102 aa4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 H3BS24 57 aa4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 TAL2Q16559 108 aa4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 MUSTN1Q8IVN3 82 aa4.73□□□□□ -1.65
HMGXB4-207ENST00000498212 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 DEFB105AQ8NG35 78 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
HMGXB4-207ENST00000498212 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms