RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 OR51M1Q9H341 326 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 VPS29Q9UBQ0 182 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 TP73-AS1Q9UF72 201 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 MYL6P60660 151 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 SCGB2B2Q4G0G5 96 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 RIPPLY2Q5TAB7 128 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZUT4 128 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 C4orf3Q8WVX3 66 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 DNAJC30Q96LL9 226 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 FAM215AQ9Y5M1 114 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 LOC100131303A0A0U1RQF7 123 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 LOC100130705A0A1B0GUX0 176 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 C17orf112F2Z3M2 114 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-30P01768 117 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-30-5P0DP03 117 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 SDHAF4Q5VUM1 108 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 SLC16A13Q7RTY0 426 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 SPANXA2-OT1Q8N9U9 137 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 PTPRDP23468 1912 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 TRBV10-2A0A0K0K1G8 114 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 A0A1B0GXF2 115 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 A8MU10 97 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 ZNF593O00488 134 aaPredicted RBP0.82□□□□□ -2.28
XRN1-214ENST00000498077 DAPP51397 102 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 C9orf116Q5BN46 136 aaPredicted RBP0.82□□□□□ -2.28
XRN1-214ENST00000498077 NAV1Q8NEY1 1877 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-66A0A0C4DH42 116 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 SMIM31A0A1B0GVY4 71 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 LINC01619G3V211 115 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 C1orf61Q13536 156 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 PDE6HQ13956 83 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 DEFB108BQ8NET1 73 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 SACSQ9NZJ4 4579 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 NDUFB6O95139 128 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 LCA10Q71F78 164 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 TMEM133Q9H2Q1 129 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 VPS13AQ96RL7 3174 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3OR16-8A0A075B7F1 116 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 CXorf51AA0A1B0GTR3 108 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 MYH9P35579 1960 aaKnown RBP0.81□□□□□ -2.28
XRN1-214ENST00000498077 STC1P52823 247 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 DYNC1H1Q14204 4646 aaKnown RBP0.81□□□□□ -2.28
XRN1-214ENST00000498077 FAT2Q9NYQ8 4349 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 CCL1P22362 96 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 SPANXN1Q5VSR9 72 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZQT0 140 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZQT7 251 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 Q8TAT8 98 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 ADAT3Q96EY9 351 aaPredicted RBP0.81□□□□□ -2.28
XRN1-214ENST00000498077 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-43A0A0B4J1X8 118 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 LOC107984640A0A0U1RRK4 108 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 K7EP13 123 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 C3orf79P0CE67 100 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 KLKP1Q107X0 134 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZRX8 168 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 DHFR2Q86XF0 187 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 PPP3R2Q96LZ3 170 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 HOPXQ9BPY8 73 aaPredicted RBP0.8□□□□□ -2.28
XRN1-214ENST00000498077 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
XRN1-214ENST00000498077 RPS25P62851 125 aaKnown RBP0.8□□□□□ -2.28
XRN1-214ENST00000498077 PPP3R1P63098 170 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 LINC01620Q4KN68 170 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 MORN4Q8NDC4 146 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 DNAH11Q96DT5 4516 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 RNF213Q63HN8 5207 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 TNXBP22105 4242 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 CEBPZOSA8MTT3 80 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-11P01762 117 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 IGLC1P0CG04 106 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 SMIM10L2AP0DMW4 78 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 SMIM10L2BP0DMW5 78 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 FXYD3Q14802 87 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 Q1T7F1 81 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 ZCCHC23Q6ZST2 131 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 NRGNQ92686 78 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 CGREF1Q99674 301 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 MYH3P11055 1940 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 A0A1W2PPC4 97 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 DEFB4AO15263 64 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 HMGA1P17096 107 aaKnown RBP0.8□□□□□ -2.28
XRN1-214ENST00000498077 DEFB136Q30KP8 78 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 FAM19A5Q7Z5A7 132 aaPredicted RBP0.8□□□□□ -2.28
XRN1-214ENST00000498077 CKAP5Q14008 2032 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 A0A087WUJ7 227 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 A8MUU9 505 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 MSMBP08118 114 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 ATXN8Q156A1 80 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 C5orf64Q2M2E5 130 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 LCE1AQ5T7P2 110 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 FAM218AQ96MZ4 157 aa0.8□□□□□ -2.28
XRN1-214ENST00000498077 H7BZZ5 65 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 KRTAP13-3Q3SY46 172 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 PRR15Q8IV56 129 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 Q8NDZ9 215 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 CDC42SE2Q9NRR3 84 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 ROCK2O75116 1388 aaKnown RBP0.79□□□□□ -2.28
XRN1-214ENST00000498077 KIAA1549Q9HCM3 1950 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 NCKAP5O14513 1909 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 S100A16Q96FQ6 103 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms