RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 C3orf22Q8N5N4 141 aa10.87□□□□□ -0.67
RPN1-208ENST00000497415 PRR4Q16378 134 aa10.86□□□□□ -0.67
RPN1-208ENST00000497415 SPANXCQ9NY87 97 aa10.86□□□□□ -0.67
RPN1-208ENST00000497415 TRAV23DV6A0A075B6W5 121 aa10.85□□□□□ -0.67
RPN1-208ENST00000497415 CTAG1AP78358 180 aa10.85□□□□□ -0.67
RPN1-208ENST00000497415 ANKRD39Q53RE8 183 aa10.85□□□□□ -0.67
RPN1-208ENST00000497415 S100A6P06703 90 aa10.84□□□□□ -0.67
RPN1-208ENST00000497415 AKR1D1P51857 326 aa10.84□□□□□ -0.67
RPN1-208ENST00000497415 Q6ZRX8 168 aa10.84□□□□□ -0.67
RPN1-208ENST00000497415 Q9BRP9 147 aa10.84□□□□□ -0.67
RPN1-208ENST00000497415 HIST3H2BBQ8N257 126 aa10.83□□□□□ -0.68
RPN1-208ENST00000497415 ZNF73O43830 326 aaPredicted RBP10.82□□□□□ -0.68
RPN1-208ENST00000497415 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
RPN1-208ENST00000497415 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
RPN1-208ENST00000497415 ATOH7Q8N100 152 aa10.82□□□□□ -0.68
RPN1-208ENST00000497415 SPANXDQ9BXN6 97 aa10.81□□□□□ -0.68
RPN1-208ENST00000497415 CBY1Q9Y3M2 126 aa10.81□□□□□ -0.68
RPN1-208ENST00000497415 HIST1H2BLQ99880 126 aa10.8□□□□□ -0.68
RPN1-208ENST00000497415 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
RPN1-208ENST00000497415 S100A2P29034 98 aa10.79□□□□□ -0.68
RPN1-208ENST00000497415 JOSD1Q15040 202 aaPredicted RBP10.79□□□□□ -0.68
RPN1-208ENST00000497415 SCGB1D4Q6XE38 83 aa10.79□□□□□ -0.68
RPN1-208ENST00000497415 SNRPEP62304 92 aaKnown RBP10.78□□□□□ -0.68
RPN1-208ENST00000497415 GAGE2AQ6NT46 116 aa10.78□□□□□ -0.68
RPN1-208ENST00000497415 LINC00518Q8N0U6 118 aa10.78□□□□□ -0.68
RPN1-208ENST00000497415 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
RPN1-208ENST00000497415 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
RPN1-208ENST00000497415 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.69
RPN1-208ENST00000497415 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
RPN1-208ENST00000497415 IFITM1P13164 125 aa10.75□□□□□ -0.69
RPN1-208ENST00000497415 Q6ZVH6 145 aa10.75□□□□□ -0.69
RPN1-208ENST00000497415 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
RPN1-208ENST00000497415 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
RPN1-208ENST00000497415 Q8NBF4 154 aa10.73□□□□□ -0.69
RPN1-208ENST00000497415 RETNLBQ9BQ08 111 aa10.73□□□□□ -0.69
RPN1-208ENST00000497415 C5orf52A6NGY3 159 aa10.72□□□□□ -0.69
RPN1-208ENST00000497415 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
RPN1-208ENST00000497415 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
RPN1-208ENST00000497415 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
RPN1-208ENST00000497415 ST20-AS1Q8NBB2 130 aa10.69□□□□□ -0.7
RPN1-208ENST00000497415 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
RPN1-208ENST00000497415 ELOF1P60002 83 aaKnown RBP10.68□□□□□ -0.7
RPN1-208ENST00000497415 MOBPQ13875 183 aa10.68□□□□□ -0.7
RPN1-208ENST00000497415 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
RPN1-208ENST00000497415 SPINK1P00995 79 aa10.67□□□□□ -0.7
RPN1-208ENST00000497415 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
RPN1-208ENST00000497415 HSBP1L1C9JCN9 74 aa10.66□□□□□ -0.7
RPN1-208ENST00000497415 COX7BP24311 80 aa10.66□□□□□ -0.7
RPN1-208ENST00000497415 TRBV7-6A0A0J9YX20 115 aa10.65□□□□□ -0.7
RPN1-208ENST00000497415 SPRR1BP22528 89 aa10.65□□□□□ -0.7
RPN1-208ENST00000497415 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
RPN1-208ENST00000497415 TPRXLQ17RH7 258 aa10.64□□□□□ -0.71
RPN1-208ENST00000497415 A6NDN8 102 aa10.62□□□□□ -0.71
RPN1-208ENST00000497415 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
RPN1-208ENST00000497415 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
RPN1-208ENST00000497415 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
RPN1-208ENST00000497415 SCGB1D1O95968 90 aa10.6□□□□□ -0.71
RPN1-208ENST00000497415 A0A1B0GWB2 263 aa10.59□□□□□ -0.71
RPN1-208ENST00000497415 C9orf153Q5TBE3 101 aa10.59□□□□□ -0.71
RPN1-208ENST00000497415 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
RPN1-208ENST00000497415 Q8N377 158 aa10.56□□□□□ -0.72
RPN1-208ENST00000497415 SMIM11BQ8TCY0 68 aa10.56□□□□□ -0.72
RPN1-208ENST00000497415 A4D1N5 150 aa10.55□□□□□ -0.72
RPN1-208ENST00000497415 CDIP1Q9H305 208 aa10.55□□□□□ -0.72
RPN1-208ENST00000497415 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
RPN1-208ENST00000497415 COX8AP10176 69 aa10.54□□□□□ -0.72
RPN1-208ENST00000497415 TAL2Q16559 108 aa10.54□□□□□ -0.72
RPN1-208ENST00000497415 TEX49A0A1B0GTD5 131 aa10.53□□□□□ -0.72
RPN1-208ENST00000497415 DLEU1O43261 78 aa10.52□□□□□ -0.73
RPN1-208ENST00000497415 SLC25A20O43772 301 aa10.52□□□□□ -0.73
RPN1-208ENST00000497415 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
RPN1-208ENST00000497415 IGLV5-48A0A075B6I7 105 aa10.51□□□□□ -0.73
RPN1-208ENST00000497415 LINC01547P58512 204 aaPredicted RBP10.51□□□□□ -0.73
RPN1-208ENST00000497415 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
RPN1-208ENST00000497415 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
RPN1-208ENST00000497415 KRTAP13-3Q3SY46 172 aa10.49□□□□□ -0.73
RPN1-208ENST00000497415 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
RPN1-208ENST00000497415 Q1RN00 199 aa10.48□□□□□ -0.73
RPN1-208ENST00000497415 HIST1H4GQ99525 98 aa10.48□□□□□ -0.73
RPN1-208ENST00000497415 MUC17Q685J3 4493 aa10.48□□□□□ -0.73
RPN1-208ENST00000497415 VAMP3Q15836 100 aa10.46□□□□□ -0.73
RPN1-208ENST00000497415 MUC2Q02817 5179 aa10.45□□□□□ -0.74
RPN1-208ENST00000497415 C14orf144Q96I85 54 aa10.45□□□□□ -0.74
RPN1-208ENST00000497415 PRO1933Q9H354 126 aa10.45□□□□□ -0.74
RPN1-208ENST00000497415 CD164Q04900 197 aa10.44□□□□□ -0.74
RPN1-208ENST00000497415 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
RPN1-208ENST00000497415 LINC00575Q6W349 94 aa10.44□□□□□ -0.74
RPN1-208ENST00000497415 PAM16Q9Y3D7 125 aa10.44□□□□□ -0.74
RPN1-208ENST00000497415 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
RPN1-208ENST00000497415 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
RPN1-208ENST00000497415 C12orf57Q99622 126 aa10.42□□□□□ -0.74
RPN1-208ENST00000497415 LIMD2Q9BT23 127 aa10.42□□□□□ -0.74
RPN1-208ENST00000497415 VAMP8Q9BV40 100 aa10.41□□□□□ -0.74
RPN1-208ENST00000497415 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
RPN1-208ENST00000497415 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
RPN1-208ENST00000497415 H7C2G1 150 aa10.37□□□□□ -0.75
RPN1-208ENST00000497415 CFC1BP0CG36 223 aa10.37□□□□□ -0.75
RPN1-208ENST00000497415 CFC1P0CG37 223 aa10.37□□□□□ -0.75
RPN1-208ENST00000497415 PYY3Q5JQD4 70 aa10.37□□□□□ -0.75
RPN1-208ENST00000497415 BVES-AS1Q5T3Y7 98 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms