RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TMEM30CPA0ZSE6 113 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 FAM223BA6NKX1 122 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 GNRH2O43555 120 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 ARMS2P0C7Q2 107 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 SS18Q15532 418 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 SFTA2Q6UW10 78 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 LYZL1Q6UWQ5 148 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 ZNF826PQ6ZT77 177 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 FAM223AQ8IWN6 122 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 DYNLRB2Q8TF09 96 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 SPTSSAQ969W0 71 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 FAM167A-AS1Q96KT0 104 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 ZFHX3Q15911 3703 aa2.52□□□□□ -2.01
SF3B1-212ENST00000496458 MUC4Q99102 2169 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 SDHAF1A6NFY7 115 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 C11orf86A6NJI1 115 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 H7C2G1 150 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 ESRGQ1W209 222 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 PIGYQ3MUY2 71 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 LINC00322Q6ZN03 302 aaPredicted RBP2.51□□□□□ -2.01
SF3B1-212ENST00000496458 VMO1Q7Z5L0 202 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 Q8IYB0 196 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 LINC00467Q9BRT7 94 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 LINC00474Q9P2X8 69 aa2.51□□□□□ -2.01
SF3B1-212ENST00000496458 FN1P02751 2386 aaKnown RBP2.51□□□□□ -2.01
SF3B1-212ENST00000496458 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 STAB1Q9NY15 2570 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 E7EQL1 145 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 NDUFA3O95167 84 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 BLCAPP62952 87 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 FAM27BQ5VT28 67 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 Q86TA4 180 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 CNFNQ9BYD5 112 aa2.5□□□□□ -2.01
SF3B1-212ENST00000496458 MRPL33O75394 65 aaKnown RBP2.49□□□□□ -2.01
SF3B1-212ENST00000496458 DNAL4O96015 105 aa2.49□□□□□ -2.01
SF3B1-212ENST00000496458 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
SF3B1-212ENST00000496458 ATP11AUNQ6ZP68 121 aa2.49□□□□□ -2.01
SF3B1-212ENST00000496458 OBSCN-AS1Q96MR7 158 aa2.49□□□□□ -2.01
SF3B1-212ENST00000496458 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 E7EUB6 86 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 F8WEM9 126 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 MIFP14174 115 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 C10orf113Q5VZT2 155 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 MUSTN1Q8IVN3 82 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 AMELXQ99217 191 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
SF3B1-212ENST00000496458 ZNF469Q96JG9 3925 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-212ENST00000496458 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 IGIPA6NJ69 53 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 PSCAO43653 123 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 PPP1R17O96001 155 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 BAALC-AS2P0C853 105 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
SF3B1-212ENST00000496458 TMEM141Q96I45 108 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 RETNLBQ9BQ08 111 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 TMEM14CQ9P0S9 112 aa2.47□□□□□ -2.01
SF3B1-212ENST00000496458 NBEAL1Q6ZS30 2694 aa2.46□□□□□ -2.01
SF3B1-212ENST00000496458 IGKV3D-7A0A0C4DH55 119 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 A6NN06 94 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 DEFB108AA8MXU0 73 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 I3L3M4 83 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 M0R3E3 92 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 C10orf128Q5T292 105 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 CLEC2BQ92478 149 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 BPESC1Q9GZL8 116 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 CYP4F30PQ9H0H9 118 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 TMEM14BQ9NUH8 114 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
SF3B1-212ENST00000496458 IGHV3-64A0A075B6Q5 118 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 A0A087WVE0 104 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 P0C880 135 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 SAA1P0DJI8 122 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-212ENST00000496458 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 Q6ZQT0 140 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 SMIM2Q9BVW6 85 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 C22orf24Q9Y442 160 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
SF3B1-212ENST00000496458 TRBV7-4A0A0J9YYF1 115 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 IGLV1-51P01701 117 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 CRIP1P50238 77 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 PDE6HQ13956 83 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 SPINK9Q5DT21 86 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 ZNF833PQ6ZTB9 187 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 LINC00269Q8N2A0 174 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 Q8N6K4 173 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 CCL19Q99731 98 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 R4GN34 69 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 SVEP1Q4LDE5 3571 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 CR1P17927 2039 aa2.44□□□□□ -2.02
SF3B1-212ENST00000496458 TRAV23DV6A0A075B6W5 121 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms