RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 KMT2CQ8NEZ4 4911 aaKnown RBP13.72□□□□□ -0.21
FGFR1-223ENST00000496296 PLECQ15149 4684 aaKnown RBP13.72□□□□□ -0.21
FGFR1-223ENST00000496296 M0R2N4 97 aa13.72□□□□□ -0.21
FGFR1-223ENST00000496296 COX7BP24311 80 aa13.72□□□□□ -0.21
FGFR1-223ENST00000496296 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.71□□□□□ -0.21
FGFR1-223ENST00000496296 LINC00846Q9NV44 126 aa13.71□□□□□ -0.21
FGFR1-223ENST00000496296 B5MCH6 92 aa13.7□□□□□ -0.22
FGFR1-223ENST00000496296 LY6G6CO95867 125 aa13.68□□□□□ -0.22
FGFR1-223ENST00000496296 GHRHP01286 108 aa13.68□□□□□ -0.22
FGFR1-223ENST00000496296 LYSTQ99698 3801 aa13.67□□□□□ -0.22
FGFR1-223ENST00000496296 LOC110117498A0A087WWA1 95 aa13.67□□□□□ -0.22
FGFR1-223ENST00000496296 HIST1H4AP62805 103 aaKnown RBP13.67□□□□□ -0.22
FGFR1-223ENST00000496296 Q6ZQY7 126 aa13.67□□□□□ -0.22
FGFR1-223ENST00000496296 IGLV5-37A0A075B6J1 123 aa13.66□□□□□ -0.22
FGFR1-223ENST00000496296 Q6ZRN7 208 aaPredicted RBP13.66□□□□□ -0.22
FGFR1-223ENST00000496296 LINC00528Q8N1L1 170 aa13.66□□□□□ -0.22
FGFR1-223ENST00000496296 DNAH1Q9P2D7 4330 aa13.66□□□□□ -0.22
FGFR1-223ENST00000496296 CNBPP62633 177 aaKnown RBP13.65□□□□□ -0.22
FGFR1-223ENST00000496296 Q6ZR54 194 aa13.65□□□□□ -0.22
FGFR1-223ENST00000496296 KCNQ1DNQ9H478 68 aa13.65□□□□□ -0.22
FGFR1-223ENST00000496296 LOC107984640A0A0U1RRK4 108 aa13.63□□□□□ -0.23
FGFR1-223ENST00000496296 RBM3P98179 157 aaKnown RBP13.63□□□□□ -0.23
FGFR1-223ENST00000496296 LRCOL1A6NCL2 159 aa13.63□□□□□ -0.23
FGFR1-223ENST00000496296 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
FGFR1-223ENST00000496296 Q6ZQT0 140 aa13.62□□□□□ -0.23
FGFR1-223ENST00000496296 PDE6GP18545 87 aa13.61□□□□□ -0.23
FGFR1-223ENST00000496296 SERTAD4-AS1Q5TG53 156 aa13.61□□□□□ -0.23
FGFR1-223ENST00000496296 NKAPP1Q8N9T2 125 aa13.61□□□□□ -0.23
FGFR1-223ENST00000496296 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
FGFR1-223ENST00000496296 ATP5EP2Q5VTU8 51 aa13.6□□□□□ -0.23
FGFR1-223ENST00000496296 C7orf33Q8WU49 177 aa13.6□□□□□ -0.23
FGFR1-223ENST00000496296 ATOX1O00244 68 aa13.59□□□□□ -0.23
FGFR1-223ENST00000496296 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
FGFR1-223ENST00000496296 C1orf134Q5TEV5 83 aa13.58□□□□□ -0.24
FGFR1-223ENST00000496296 UQCRQO14949 82 aa13.57□□□□□ -0.24
FGFR1-223ENST00000496296 SS18L2Q9UHA2 77 aa13.57□□□□□ -0.24
FGFR1-223ENST00000496296 IGKV3D-7A0A0C4DH55 119 aa13.57□□□□□ -0.24
FGFR1-223ENST00000496296 C3orf22Q8N5N4 141 aa13.57□□□□□ -0.24
FGFR1-223ENST00000496296 PKIGQ9Y2B9 76 aa13.56□□□□□ -0.24
FGFR1-223ENST00000496296 PRYO14603 147 aa13.54□□□□□ -0.24
FGFR1-223ENST00000496296 TRBV7-4A0A0J9YYF1 115 aa13.53□□□□□ -0.24
FGFR1-223ENST00000496296 DSCR8Q96T75 97 aa13.53□□□□□ -0.24
FGFR1-223ENST00000496296 ALMS1Q8TCU4 4167 aa13.53□□□□□ -0.24
FGFR1-223ENST00000496296 A0A087WTM6 91 aa13.53□□□□□ -0.24
FGFR1-223ENST00000496296 SPRR1AP35321 89 aa13.53□□□□□ -0.24
FGFR1-223ENST00000496296 RYR3Q15413 4870 aa13.52□□□□□ -0.24
FGFR1-223ENST00000496296 KRTAP4-16G5E9R7 235 aaPredicted RBP13.52□□□□□ -0.25
FGFR1-223ENST00000496296 COX7CP15954 63 aa13.52□□□□□ -0.25
FGFR1-223ENST00000496296 VPS13DQ5THJ4 4388 aa13.52□□□□□ -0.25
FGFR1-223ENST00000496296 IGLV1-50A0A075B6I6 118 aa13.51□□□□□ -0.25
FGFR1-223ENST00000496296 C16orf90A8MZG2 172 aa13.51□□□□□ -0.25
FGFR1-223ENST00000496296 UBL5Q9BZL1 73 aa13.51□□□□□ -0.25
FGFR1-223ENST00000496296 KRTAP7-1Q8IUC3 87 aa13.5□□□□□ -0.25
FGFR1-223ENST00000496296 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
FGFR1-223ENST00000496296 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
FGFR1-223ENST00000496296 A0A096LNI7 61 aa13.48□□□□□ -0.25
FGFR1-223ENST00000496296 FAM168BA1KXE4 195 aa13.47□□□□□ -0.25
FGFR1-223ENST00000496296 C9orf153Q5TBE3 101 aa13.47□□□□□ -0.25
FGFR1-223ENST00000496296 DHRS4-AS1Q9P1J3 65 aa13.47□□□□□ -0.25
FGFR1-223ENST00000496296 HYDINQ4G0P3 5121 aa13.47□□□□□ -0.25
FGFR1-223ENST00000496296 LCE6AA0A183 80 aa13.46□□□□□ -0.25
FGFR1-223ENST00000496296 IGKV2-24A0A0C4DH68 120 aa13.46□□□□□ -0.26
FGFR1-223ENST00000496296 Q6ZRX8 168 aa13.46□□□□□ -0.26
FGFR1-223ENST00000496296 FAM19A5Q7Z5A7 132 aaPredicted RBP13.44□□□□□ -0.26
FGFR1-223ENST00000496296 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
FGFR1-223ENST00000496296 A0A087WVE0 104 aa13.44□□□□□ -0.26
FGFR1-223ENST00000496296 CRYGAP11844 174 aa13.44□□□□□ -0.26
FGFR1-223ENST00000496296 LINC00474Q9P2X8 69 aa13.42□□□□□ -0.26
FGFR1-223ENST00000496296 SERP2Q8N6R1 65 aa13.42□□□□□ -0.26
FGFR1-223ENST00000496296 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
FGFR1-223ENST00000496296 DNAH10Q8IVF4 4471 aa13.41□□□□□ -0.26
FGFR1-223ENST00000496296 LINC01547P58512 204 aaPredicted RBP13.4□□□□□ -0.26
FGFR1-223ENST00000496296 RYR2Q92736 4967 aa13.4□□□□□ -0.26
FGFR1-223ENST00000496296 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
FGFR1-223ENST00000496296 ETDCA0A1B0GVM5 59 aa13.39□□□□□ -0.27
FGFR1-223ENST00000496296 Q8N377 158 aa13.39□□□□□ -0.27
FGFR1-223ENST00000496296 Q9BRP9 147 aa13.39□□□□□ -0.27
FGFR1-223ENST00000496296 RTL8CO15255 209 aa13.38□□□□□ -0.27
FGFR1-223ENST00000496296 Q6ZVQ6 151 aa13.38□□□□□ -0.27
FGFR1-223ENST00000496296 IGLV5-48A0A075B6I7 105 aa13.36□□□□□ -0.27
FGFR1-223ENST00000496296 CHTF8P0CG12 524 aa13.36□□□□□ -0.27
FGFR1-223ENST00000496296 TNP2Q05952 138 aa13.35□□□□□ -0.27
FGFR1-223ENST00000496296 DNAH6Q9C0G6 4158 aa13.34□□□□□ -0.27
FGFR1-223ENST00000496296 IGLV5-52A0A0A0MRZ9 124 aa13.34□□□□□ -0.27
FGFR1-223ENST00000496296 A0A1W2PNN7 141 aa13.34□□□□□ -0.27
FGFR1-223ENST00000496296 CXCL6P80162 114 aa13.34□□□□□ -0.27
FGFR1-223ENST00000496296 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
FGFR1-223ENST00000496296 BCE1O60756 84 aa13.33□□□□□ -0.27
FGFR1-223ENST00000496296 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
FGFR1-223ENST00000496296 DPH3Q96FX2 82 aa13.33□□□□□ -0.28
FGFR1-223ENST00000496296 A0A1B0GW54 56 aa13.29□□□□□ -0.28
FGFR1-223ENST00000496296 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
FGFR1-223ENST00000496296 SPACA4Q8TDM5 124 aa13.27□□□□□ -0.28
FGFR1-223ENST00000496296 HAMPP81172 84 aa13.27□□□□□ -0.29
FGFR1-223ENST00000496296 DEFB105AQ8NG35 78 aa13.27□□□□□ -0.29
FGFR1-223ENST00000496296 UBE2BP63146 152 aa13.25□□□□□ -0.29
FGFR1-223ENST00000496296 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
FGFR1-223ENST00000496296 PANO1I0J062 215 aa13.24□□□□□ -0.29
FGFR1-223ENST00000496296 ERC2-IT1O76042 136 aa13.24□□□□□ -0.29
FGFR1-223ENST00000496296 PHF5AQ7RTV0 110 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms