RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.26
CMSS1-208ENST00000496116 TRBV7-4A0A0J9YYF1 115 aa7.2□□□□□ -1.26
CMSS1-208ENST00000496116 CASC10Q5T4H9 136 aa7.2□□□□□ -1.26
CMSS1-208ENST00000496116 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
CMSS1-208ENST00000496116 A0A087WVE0 104 aa7.19□□□□□ -1.26
CMSS1-208ENST00000496116 PRYO14603 147 aa7.18□□□□□ -1.26
CMSS1-208ENST00000496116 COX7CP15954 63 aa7.18□□□□□ -1.26
CMSS1-208ENST00000496116 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
CMSS1-208ENST00000496116 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
CMSS1-208ENST00000496116 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
CMSS1-208ENST00000496116 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
CMSS1-208ENST00000496116 IGLV1-50A0A075B6I6 118 aa7.16□□□□□ -1.26
CMSS1-208ENST00000496116 M0R2N4 97 aa7.16□□□□□ -1.26
CMSS1-208ENST00000496116 Q6ZVQ6 151 aa7.16□□□□□ -1.26
CMSS1-208ENST00000496116 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
CMSS1-208ENST00000496116 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
CMSS1-208ENST00000496116 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
CMSS1-208ENST00000496116 Q6ZRX8 168 aa7.15□□□□□ -1.26
CMSS1-208ENST00000496116 ETDCA0A1B0GVM5 59 aa7.15□□□□□ -1.27
CMSS1-208ENST00000496116 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.27
CMSS1-208ENST00000496116 HAMPP81172 84 aa7.15□□□□□ -1.27
CMSS1-208ENST00000496116 MRPL55Q7Z7F7 128 aaKnown RBP7.15□□□□□ -1.27
CMSS1-208ENST00000496116 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.27
CMSS1-208ENST00000496116 SPRR1AP35321 89 aa7.14□□□□□ -1.27
CMSS1-208ENST00000496116 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
CMSS1-208ENST00000496116 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
CMSS1-208ENST00000496116 PSCAO43653 123 aa7.13□□□□□ -1.27
CMSS1-208ENST00000496116 CXCL6P80162 114 aa7.13□□□□□ -1.27
CMSS1-208ENST00000496116 FAM19A5Q7Z5A7 132 aaPredicted RBP7.13□□□□□ -1.27
CMSS1-208ENST00000496116 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
CMSS1-208ENST00000496116 CRYGAP11844 174 aa7.13□□□□□ -1.27
CMSS1-208ENST00000496116 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
CMSS1-208ENST00000496116 DNAH1Q9P2D7 4330 aa7.12□□□□□ -1.27
CMSS1-208ENST00000496116 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
CMSS1-208ENST00000496116 KRTAP7-1Q8IUC3 87 aa7.11□□□□□ -1.27
CMSS1-208ENST00000496116 Q8N377 158 aa7.11□□□□□ -1.27
CMSS1-208ENST00000496116 B9D2Q9BPU9 175 aa7.11□□□□□ -1.27
CMSS1-208ENST00000496116 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
CMSS1-208ENST00000496116 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
CMSS1-208ENST00000496116 Q9BRP9 147 aa7.1□□□□□ -1.27
CMSS1-208ENST00000496116 KRTAP1-5Q9BYS1 174 aa7.1□□□□□ -1.27
CMSS1-208ENST00000496116 C14orf177Q52M58 125 aa7.1□□□□□ -1.27
CMSS1-208ENST00000496116 IGLV5-48A0A075B6I7 105 aa7.09□□□□□ -1.27
CMSS1-208ENST00000496116 C16orf90A8MZG2 172 aa7.09□□□□□ -1.27
CMSS1-208ENST00000496116 KRTAP21-3Q3LHN1 58 aa7.09□□□□□ -1.28
CMSS1-208ENST00000496116 REG3GQ6UW15 175 aa7.09□□□□□ -1.28
CMSS1-208ENST00000496116 UBE2BP63146 152 aa7.08□□□□□ -1.28
CMSS1-208ENST00000496116 BCE1O60756 84 aa7.07□□□□□ -1.28
CMSS1-208ENST00000496116 A0A096LNI7 61 aa7.07□□□□□ -1.28
CMSS1-208ENST00000496116 A0A1B0GW54 56 aa7.07□□□□□ -1.28
CMSS1-208ENST00000496116 FUSP35637 526 aaKnown RBP eCLIP7.06□□□□□ -1.28
CMSS1-208ENST00000496116 NREPQ16612 68 aa7.06□□□□□ -1.28
CMSS1-208ENST00000496116 MDFIQ99750 246 aa7.06□□□□□ -1.28
CMSS1-208ENST00000496116 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
CMSS1-208ENST00000496116 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
CMSS1-208ENST00000496116 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
CMSS1-208ENST00000496116 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 STAB2Q8WWQ8 2551 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
CMSS1-208ENST00000496116 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 TNP2Q05952 138 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 SCXQ7RTU7 201 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
CMSS1-208ENST00000496116 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
CMSS1-208ENST00000496116 LYSTQ99698 3801 aa7.03□□□□□ -1.28
CMSS1-208ENST00000496116 COL7A1Q02388 2944 aa7.02□□□□□ -1.28
CMSS1-208ENST00000496116 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
CMSS1-208ENST00000496116 TRAV7A0A075B6U4 112 aa7.01□□□□□ -1.29
CMSS1-208ENST00000496116 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
CMSS1-208ENST00000496116 BPY2O14599 106 aa7.01□□□□□ -1.29
CMSS1-208ENST00000496116 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
CMSS1-208ENST00000496116 F8WEM9 126 aa7.01□□□□□ -1.29
CMSS1-208ENST00000496116 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
CMSS1-208ENST00000496116 TMEM258P61165 79 aa7□□□□□ -1.29
CMSS1-208ENST00000496116 Q8NBF4 154 aa7□□□□□ -1.29
CMSS1-208ENST00000496116 A0A1W2PNM2 257 aa7□□□□□ -1.29
CMSS1-208ENST00000496116 C9orf163Q8N9P6 203 aa6.99□□□□□ -1.29
CMSS1-208ENST00000496116 PRLHP81277 87 aa6.98□□□□□ -1.29
CMSS1-208ENST00000496116 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
CMSS1-208ENST00000496116 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
CMSS1-208ENST00000496116 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
CMSS1-208ENST00000496116 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 HIGD2AQ9BW72 106 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
CMSS1-208ENST00000496116 PHF5AQ7RTV0 110 aaKnown RBP6.96□□□□□ -1.3
CMSS1-208ENST00000496116 Q8N9L7 120 aa6.96□□□□□ -1.3
CMSS1-208ENST00000496116 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.3
CMSS1-208ENST00000496116 H0Y9J4 135 aa6.95□□□□□ -1.3
CMSS1-208ENST00000496116 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
CMSS1-208ENST00000496116 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
CMSS1-208ENST00000496116 J3KT08 172 aa6.94□□□□□ -1.3
CMSS1-208ENST00000496116 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
CMSS1-208ENST00000496116 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
CMSS1-208ENST00000496116 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
CMSS1-208ENST00000496116 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 EPM2AB3EWF7 344 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms