RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 CACNA1CQ13936 2221 aa1.43□□□□□ -2.18
NCKAP1-208ENST00000495619 DUOX1Q9NRD9 1551 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 A0A096LNT2 108 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 SPTY2D1-AS1A0A0U1RR47 76 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 LY6G6CO95867 125 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 TMEM167BQ9NRX6 74 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 A0A0G2JMZ2 1700 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 PLXNB2O15031 1838 aa1.42□□□□□ -2.18
NCKAP1-208ENST00000495619 ABCA1O95477 2261 aa1.41□□□□□ -2.18
NCKAP1-208ENST00000495619 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
NCKAP1-208ENST00000495619 CRIP1P50238 77 aa1.41□□□□□ -2.18
NCKAP1-208ENST00000495619 LRRC37AA6NMS7 1700 aa1.4□□□□□ -2.18
NCKAP1-208ENST00000495619 LMO7Q8WWI1 1683 aa1.4□□□□□ -2.19
NCKAP1-208ENST00000495619 SSC5DA1L4H1 1573 aa1.4□□□□□ -2.19
NCKAP1-208ENST00000495619 DEFB131BA0A096LNP1 70 aa1.4□□□□□ -2.19
NCKAP1-208ENST00000495619 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
NCKAP1-208ENST00000495619 C4BP0C0L5 1744 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 LINC00158P58513 81 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 UBE2DNLQ8IWF7 75 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 CADP27708 2225 aa1.38□□□□□ -2.19
NCKAP1-208ENST00000495619 CRIPTQ9P021 101 aa1.37□□□□□ -2.19
NCKAP1-208ENST00000495619 CDKN2A-AS1Q9UH64 79 aa1.37□□□□□ -2.19
NCKAP1-208ENST00000495619 TECTAO75443 2155 aa1.37□□□□□ -2.19
NCKAP1-208ENST00000495619 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
NCKAP1-208ENST00000495619 Q8IZM0 81 aa1.36□□□□□ -2.19
NCKAP1-208ENST00000495619 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
NCKAP1-208ENST00000495619 URB1O60287 2271 aaKnown RBP1.36□□□□□ -2.19
NCKAP1-208ENST00000495619 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
NCKAP1-208ENST00000495619 TFF3Q07654 80 aa1.35□□□□□ -2.19
NCKAP1-208ENST00000495619 SMIM2Q9BVW6 85 aa1.35□□□□□ -2.19
NCKAP1-208ENST00000495619 GOLGA4Q13439 2230 aaKnown RBP1.35□□□□□ -2.19
NCKAP1-208ENST00000495619 ASXL3Q9C0F0 2248 aa1.35□□□□□ -2.19
NCKAP1-208ENST00000495619 PRO3102Q9H379 93 aa1.34□□□□□ -2.19
NCKAP1-208ENST00000495619 LOC730098B7Z3J9 87 aa1.33□□□□□ -2.2
NCKAP1-208ENST00000495619 ASCC3Q8N3C0 2202 aaKnown RBP1.33□□□□□ -2.2
NCKAP1-208ENST00000495619 KNTC1P50748 2209 aa1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 NDUFA1O15239 70 aa1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 IAPPP10997 89 aa1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 USMG5Q96IX5 58 aa1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 TNRC6CQ9HCJ0 1690 aaKnown RBP1.32□□□□□ -2.2
NCKAP1-208ENST00000495619 K7EQZ3 153 aa1.31□□□□□ -2.2
NCKAP1-208ENST00000495619 CNFNQ9BYD5 112 aa1.31□□□□□ -2.2
NCKAP1-208ENST00000495619 TP53AIP1Q9HCN2 124 aa1.31□□□□□ -2.2
NCKAP1-208ENST00000495619 LYNX1G3V0Z9 82 aa1.3□□□□□ -2.2
NCKAP1-208ENST00000495619 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
NCKAP1-208ENST00000495619 I3L2K1 104 aa1.29□□□□□ -2.2
NCKAP1-208ENST00000495619 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
NCKAP1-208ENST00000495619 PIGYQ3MUY2 71 aa1.29□□□□□ -2.2
NCKAP1-208ENST00000495619 MINOS1Q5TGZ0 78 aa1.29□□□□□ -2.2
NCKAP1-208ENST00000495619 AHCTF1Q8WYP5 2266 aa1.29□□□□□ -2.2
NCKAP1-208ENST00000495619 CCL22O00626 93 aa1.28□□□□□ -2.2
NCKAP1-208ENST00000495619 DEFB123Q8N688 67 aa1.28□□□□□ -2.2
NCKAP1-208ENST00000495619 C6orf48Q9UBA6 75 aa1.28□□□□□ -2.2
NCKAP1-208ENST00000495619 ARHGAP5-AS1Q96IT6 56 aa1.27□□□□□ -2.21
NCKAP1-208ENST00000495619 CACNA1EQ15878 2313 aa1.27□□□□□ -2.21
NCKAP1-208ENST00000495619 BPTFQ12830 3046 aa1.26□□□□□ -2.21
NCKAP1-208ENST00000495619 H0YAA0 97 aa1.26□□□□□ -2.21
NCKAP1-208ENST00000495619 ANKRD17O75179 2603 aaKnown RBP1.26□□□□□ -2.21
NCKAP1-208ENST00000495619 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
NCKAP1-208ENST00000495619 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
NCKAP1-208ENST00000495619 COX6A2Q02221 97 aa1.25□□□□□ -2.21
NCKAP1-208ENST00000495619 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
NCKAP1-208ENST00000495619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.24□□□□□ -2.212e-7■■■□□ 17.9
NCKAP1-208ENST00000495619 CNOT1A5YKK6 2376 aaKnown RBP1.24□□□□□ -2.21
NCKAP1-208ENST00000495619 K7EIL1 84 aa1.24□□□□□ -2.21
NCKAP1-208ENST00000495619 RPS27LQ71UM5 84 aaKnown RBP1.24□□□□□ -2.21
NCKAP1-208ENST00000495619 TTTY10Q9BZA0 68 aa1.24□□□□□ -2.21
NCKAP1-208ENST00000495619 LELP1Q5T871 98 aa1.23□□□□□ -2.21
NCKAP1-208ENST00000495619 WFDC10BQ8IUB3 73 aa1.23□□□□□ -2.21
NCKAP1-208ENST00000495619 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
NCKAP1-208ENST00000495619 ROS1P08922 2347 aa1.22□□□□□ -2.21
NCKAP1-208ENST00000495619 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
NCKAP1-208ENST00000495619 RPS27P42677 84 aaKnown RBP1.21□□□□□ -2.22
NCKAP1-208ENST00000495619 APLNQ9ULZ1 77 aa1.21□□□□□ -2.22
NCKAP1-208ENST00000495619 ZDBF2Q9HCK1 2354 aa1.21□□□□□ -2.22
NCKAP1-208ENST00000495619 DOPEY2Q9Y3R5 2298 aa1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 LINC01590Q5TEZ4 76 aa1.2□□□□□ -2.22
NCKAP1-208ENST00000495619 IGLV5-48A0A075B6I7 105 aa1.19□□□□□ -2.22
NCKAP1-208ENST00000495619 KAAG1Q9UBP8 84 aa1.19□□□□□ -2.22
NCKAP1-208ENST00000495619 FAM208BQ5VWN6 2430 aa1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 NAV3Q8IVL0 2385 aa1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 H3BSH0 61 aa1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 SPRR1AP35321 89 aa1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
NCKAP1-208ENST00000495619 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
NCKAP1-208ENST00000495619 CNTRLQ7Z7A1 2325 aa1.16□□□□□ -2.22
NCKAP1-208ENST00000495619 WT1-ASQ06250 92 aa1.16□□□□□ -2.22
NCKAP1-208ENST00000495619 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
NCKAP1-208ENST00000495619 Q5VSD8 79 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms