RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CCKP06307 115 aa9.8□□□□□ -0.84
CHTOP-206ENST00000495554 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
CHTOP-206ENST00000495554 LINC00846Q9NV44 126 aa9.79□□□□□ -0.84
CHTOP-206ENST00000495554 IGKV2D-24A0A075B6R9 120 aa9.79□□□□□ -0.84
CHTOP-206ENST00000495554 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
CHTOP-206ENST00000495554 DIRC1Q969H9 104 aa9.78□□□□□ -0.84
CHTOP-206ENST00000495554 VPREB1P12018 145 aa9.77□□□□□ -0.84
CHTOP-206ENST00000495554 TRAV10A0A0B4J240 114 aa9.77□□□□□ -0.85
CHTOP-206ENST00000495554 RBM12B-AS1Q9P1G2 102 aa9.76□□□□□ -0.85
CHTOP-206ENST00000495554 ZNF73O43830 326 aaPredicted RBP9.76□□□□□ -0.85
CHTOP-206ENST00000495554 H3BQ85 93 aa9.75□□□□□ -0.85
CHTOP-206ENST00000495554 M0R378 163 aa9.75□□□□□ -0.85
CHTOP-206ENST00000495554 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
CHTOP-206ENST00000495554 Q6JHZ5 121 aa9.74□□□□□ -0.85
CHTOP-206ENST00000495554 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
CHTOP-206ENST00000495554 Q6ZQY7 126 aa9.73□□□□□ -0.85
CHTOP-206ENST00000495554 COX7BP24311 80 aa9.73□□□□□ -0.85
CHTOP-206ENST00000495554 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
CHTOP-206ENST00000495554 ELOF1P60002 83 aaKnown RBP9.72□□□□□ -0.85
CHTOP-206ENST00000495554 RBM3P98179 157 aaKnown RBP9.72□□□□□ -0.85
CHTOP-206ENST00000495554 Q6ZRP5 223 aa9.72□□□□□ -0.85
CHTOP-206ENST00000495554 MDFIQ99750 246 aa9.72□□□□□ -0.85
CHTOP-206ENST00000495554 LAMTOR3Q9UHA4 124 aa9.72□□□□□ -0.85
CHTOP-206ENST00000495554 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.85
CHTOP-206ENST00000495554 GHRHP01286 108 aa9.7□□□□□ -0.86
CHTOP-206ENST00000495554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
CHTOP-206ENST00000495554 LOC110117498A0A087WWA1 95 aa9.69□□□□□ -0.86
CHTOP-206ENST00000495554 IGKV3D-7A0A0C4DH55 119 aa9.69□□□□□ -0.86
CHTOP-206ENST00000495554 Q6ZQT0 140 aa9.69□□□□□ -0.86
CHTOP-206ENST00000495554 DNAH9Q9NYC9 4486 aa9.68□□□□□ -0.86
CHTOP-206ENST00000495554 COL7A1Q02388 2944 aa9.68□□□□□ -0.86
CHTOP-206ENST00000495554 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
CHTOP-206ENST00000495554 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
CHTOP-206ENST00000495554 PDE6GP18545 87 aa9.67□□□□□ -0.86
CHTOP-206ENST00000495554 ATP5EP2Q5VTU8 51 aa9.66□□□□□ -0.86
CHTOP-206ENST00000495554 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
CHTOP-206ENST00000495554 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
CHTOP-206ENST00000495554 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
CHTOP-206ENST00000495554 RMI2Q96E14 147 aa9.65□□□□□ -0.86
CHTOP-206ENST00000495554 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.87
CHTOP-206ENST00000495554 STAB2Q8WWQ8 2551 aa9.64□□□□□ -0.87
CHTOP-206ENST00000495554 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
CHTOP-206ENST00000495554 H7BZZ5 65 aa9.64□□□□□ -0.87
CHTOP-206ENST00000495554 KCNQ1DNQ9H478 68 aa9.63□□□□□ -0.87
CHTOP-206ENST00000495554 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
CHTOP-206ENST00000495554 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
CHTOP-206ENST00000495554 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
CHTOP-206ENST00000495554 A0A087WVE0 104 aa9.61□□□□□ -0.87
CHTOP-206ENST00000495554 CASC10Q5T4H9 136 aa9.61□□□□□ -0.87
CHTOP-206ENST00000495554 C7orf33Q8WU49 177 aa9.61□□□□□ -0.87
CHTOP-206ENST00000495554 TRBV7-4A0A0J9YYF1 115 aa9.6□□□□□ -0.87
CHTOP-206ENST00000495554 M0R2N4 97 aa9.58□□□□□ -0.88
CHTOP-206ENST00000495554 KTN1-AS1Q86SY8 53 aa9.58□□□□□ -0.88
CHTOP-206ENST00000495554 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
CHTOP-206ENST00000495554 LYSTQ99698 3801 aa9.57□□□□□ -0.88
CHTOP-206ENST00000495554 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
CHTOP-206ENST00000495554 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
CHTOP-206ENST00000495554 Q6ZVQ6 151 aa9.55□□□□□ -0.88
CHTOP-206ENST00000495554 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
CHTOP-206ENST00000495554 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
CHTOP-206ENST00000495554 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
CHTOP-206ENST00000495554 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
CHTOP-206ENST00000495554 PRYO14603 147 aa9.53□□□□□ -0.88
CHTOP-206ENST00000495554 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
CHTOP-206ENST00000495554 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
CHTOP-206ENST00000495554 RPL37AP8A6NKH3 93 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 DNAH10Q8IVF4 4471 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 HAMPP81172 84 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 Q6ZRX8 168 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
CHTOP-206ENST00000495554 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
CHTOP-206ENST00000495554 SPRR1AP35321 89 aa9.51□□□□□ -0.89
CHTOP-206ENST00000495554 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
CHTOP-206ENST00000495554 CXCL6P80162 114 aa9.5□□□□□ -0.89
CHTOP-206ENST00000495554 ETDCA0A1B0GVM5 59 aa9.49□□□□□ -0.89
CHTOP-206ENST00000495554 ATP5EP56381 51 aaPredicted RBP9.49□□□□□ -0.89
CHTOP-206ENST00000495554 FAM229BQ4G0N7 80 aa9.49□□□□□ -0.89
CHTOP-206ENST00000495554 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
CHTOP-206ENST00000495554 TENM2Q9NT68 2774 aa9.48□□□□□ -0.89
CHTOP-206ENST00000495554 Q8N377 158 aa9.48□□□□□ -0.89
CHTOP-206ENST00000495554 DEFB105AQ8NG35 78 aa9.48□□□□□ -0.89
CHTOP-206ENST00000495554 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
CHTOP-206ENST00000495554 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
CHTOP-206ENST00000495554 Q9BRP9 147 aa9.47□□□□□ -0.89
CHTOP-206ENST00000495554 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
CHTOP-206ENST00000495554 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
CHTOP-206ENST00000495554 CNBPP62633 177 aaKnown RBP9.45□□□□□ -0.9
CHTOP-206ENST00000495554 PSCAO43653 123 aa9.44□□□□□ -0.9
CHTOP-206ENST00000495554 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
CHTOP-206ENST00000495554 F8WEM9 126 aa9.43□□□□□ -0.9
CHTOP-206ENST00000495554 C16orf90A8MZG2 172 aa9.42□□□□□ -0.9
CHTOP-206ENST00000495554 BCE1O60756 84 aa9.42□□□□□ -0.9
CHTOP-206ENST00000495554 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
CHTOP-206ENST00000495554 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
CHTOP-206ENST00000495554 A0A096LNI7 61 aa9.4□□□□□ -0.9
CHTOP-206ENST00000495554 UBE2BP63146 152 aa9.4□□□□□ -0.9
CHTOP-206ENST00000495554 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
CHTOP-206ENST00000495554 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms