RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 LINC00158P58513 81 aa4.02□□□□□ -1.77
GARNL3-219ENST00000495172 SEC11AP67812 179 aa4.02□□□□□ -1.77
GARNL3-219ENST00000495172 IGFL1Q6UW32 110 aa4.02□□□□□ -1.77
GARNL3-219ENST00000495172 ALKAL2Q6UX46 152 aa4.02□□□□□ -1.77
GARNL3-219ENST00000495172 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
GARNL3-219ENST00000495172 SMLR1H3BR10 107 aa4.01□□□□□ -1.77
GARNL3-219ENST00000495172 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
GARNL3-219ENST00000495172 TINCRA0A1B0GVN0 87 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 A8MUU9 505 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 ADCYAP1P18509 176 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 COX17Q14061 63 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 Q5VV11 94 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 PRO1933Q9H354 126 aa4□□□□□ -1.77
GARNL3-219ENST00000495172 SPRR1BP22528 89 aa3.99□□□□□ -1.77
GARNL3-219ENST00000495172 PMVKQ15126 192 aa3.99□□□□□ -1.77
GARNL3-219ENST00000495172 TCTE3Q8IZS6 198 aa3.99□□□□□ -1.77
GARNL3-219ENST00000495172 IGLV5-39A0A0G2JS06 123 aa3.98□□□□□ -1.77
GARNL3-219ENST00000495172 ARPC5O15511 151 aa3.98□□□□□ -1.77
GARNL3-219ENST00000495172 RPL23P62829 140 aaKnown RBP3.98□□□□□ -1.77
GARNL3-219ENST00000495172 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
GARNL3-219ENST00000495172 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
GARNL3-219ENST00000495172 HMSDA8MTL9 139 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 UMAD1C9J7I0 102 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 DDTP30046 118 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 CEBPGP53567 150 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 DEFB105AQ8NG35 78 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 PRELID3AQ96N28 172 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 V9GYV3 84 aa3.97□□□□□ -1.77
GARNL3-219ENST00000495172 SMIM13P0DJ93 91 aa3.96□□□□□ -1.78
GARNL3-219ENST00000495172 MRPL54Q6P161 138 aaKnown RBP3.96□□□□□ -1.78
GARNL3-219ENST00000495172 AKR1D1P51857 326 aa3.95□□□□□ -1.78
GARNL3-219ENST00000495172 ZNF345Q14585 488 aa3.95□□□□□ -1.78
GARNL3-219ENST00000495172 TMEM136Q6ZRR5 245 aa3.95□□□□□ -1.78
GARNL3-219ENST00000495172 KANTRA0A1W2PQU2 76 aa3.94□□□□□ -1.78
GARNL3-219ENST00000495172 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
GARNL3-219ENST00000495172 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
GARNL3-219ENST00000495172 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
GARNL3-219ENST00000495172 CST9LQ9H4G1 147 aa3.94□□□□□ -1.78
GARNL3-219ENST00000495172 TCL1BO95988 128 aa3.93□□□□□ -1.78
GARNL3-219ENST00000495172 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
GARNL3-219ENST00000495172 FAM74A3Q4VXF1 159 aa3.93□□□□□ -1.78
GARNL3-219ENST00000495172 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
GARNL3-219ENST00000495172 Q8N8P6 123 aa3.93□□□□□ -1.78
GARNL3-219ENST00000495172 JOSD1Q15040 202 aaPredicted RBP3.92□□□□□ -1.78
GARNL3-219ENST00000495172 SLC25A34Q6PIV7 304 aa3.92□□□□□ -1.78
GARNL3-219ENST00000495172 OSTCQ9NRP0 149 aa3.92□□□□□ -1.78
GARNL3-219ENST00000495172 NAT8BQ9UHF3 227 aa3.92□□□□□ -1.78
GARNL3-219ENST00000495172 H3BRM9 83 aa3.91□□□□□ -1.78
GARNL3-219ENST00000495172 ZNF22P17026 224 aaPredicted RBP3.91□□□□□ -1.78
GARNL3-219ENST00000495172 S100A12P80511 92 aa3.91□□□□□ -1.78
GARNL3-219ENST00000495172 SLC51BQ86UW2 128 aa3.91□□□□□ -1.78
GARNL3-219ENST00000495172 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
GARNL3-219ENST00000495172 MAP1LC3AQ9H492 121 aa3.91□□□□□ -1.78
GARNL3-219ENST00000495172 TRAV23DV6A0A075B6W5 121 aa3.9□□□□□ -1.79
GARNL3-219ENST00000495172 PPBPP02775 128 aa3.9□□□□□ -1.79
GARNL3-219ENST00000495172 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.79
GARNL3-219ENST00000495172 TOMM6Q96B49 74 aa3.9□□□□□ -1.79
GARNL3-219ENST00000495172 IMUPQ9GZP8 106 aa3.9□□□□□ -1.79
GARNL3-219ENST00000495172 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
GARNL3-219ENST00000495172 ZNF73O43830 326 aaPredicted RBP3.89□□□□□ -1.79
GARNL3-219ENST00000495172 DSCR10P59022 87 aa3.89□□□□□ -1.79
GARNL3-219ENST00000495172 TAL2Q16559 108 aa3.89□□□□□ -1.79
GARNL3-219ENST00000495172 ORMDL2Q53FV1 153 aa3.89□□□□□ -1.79
GARNL3-219ENST00000495172 SMIM27A0A1W2PRY6 76 aa3.88□□□□□ -1.79
GARNL3-219ENST00000495172 ATP6V1G1O75348 118 aa3.88□□□□□ -1.79
GARNL3-219ENST00000495172 ERASQ7Z444 233 aa3.88□□□□□ -1.79
GARNL3-219ENST00000495172 A0A1W2PNM2 257 aa3.87□□□□□ -1.79
GARNL3-219ENST00000495172 F8W036 122 aa3.87□□□□□ -1.79
GARNL3-219ENST00000495172 C5orf52A6NGY3 159 aa3.86□□□□□ -1.79
GARNL3-219ENST00000495172 MT4P47944 62 aa3.86□□□□□ -1.79
GARNL3-219ENST00000495172 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
GARNL3-219ENST00000495172 S100A7L2Q5SY68 101 aa3.86□□□□□ -1.79
GARNL3-219ENST00000495172 SMIM7Q9BQ49 75 aa3.86□□□□□ -1.79
GARNL3-219ENST00000495172 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
GARNL3-219ENST00000495172 IFITM2Q01629 132 aa3.85□□□□□ -1.79
GARNL3-219ENST00000495172 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
GARNL3-219ENST00000495172 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
GARNL3-219ENST00000495172 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
GARNL3-219ENST00000495172 A0A1B0GW15 77 aa3.83□□□□□ -1.8
GARNL3-219ENST00000495172 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
GARNL3-219ENST00000495172 NDUFA6P56556 154 aa3.83□□□□□ -1.8
GARNL3-219ENST00000495172 TRBV10-2A0A0K0K1G8 114 aa3.82□□□□□ -1.8
GARNL3-219ENST00000495172 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
GARNL3-219ENST00000495172 CLLU1Q5K131 121 aa3.81□□□□□ -1.8
GARNL3-219ENST00000495172 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
GARNL3-219ENST00000495172 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
GARNL3-219ENST00000495172 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
GARNL3-219ENST00000495172 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
GARNL3-219ENST00000495172 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
GARNL3-219ENST00000495172 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
GARNL3-219ENST00000495172 S100A8P05109 93 aa3.79□□□□□ -1.8
GARNL3-219ENST00000495172 NPC2P61916 151 aa3.79□□□□□ -1.8
GARNL3-219ENST00000495172 ADIRFQ15847 76 aa3.79□□□□□ -1.8
GARNL3-219ENST00000495172 C9JQL5 133 aa3.78□□□□□ -1.8
GARNL3-219ENST00000495172 SRP19P09132 144 aaKnown RBP3.78□□□□□ -1.8
GARNL3-219ENST00000495172 PEA15Q15121 130 aa3.78□□□□□ -1.8
GARNL3-219ENST00000495172 NXT2Q9NPJ8 142 aaKnown RBP3.78□□□□□ -1.8
GARNL3-219ENST00000495172 LAMTOR2Q9Y2Q5 125 aa3.78□□□□□ -1.8
GARNL3-219ENST00000495172 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
GARNL3-219ENST00000495172 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms