RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 Q6ZTC4 211 aa10.06□□□□□ -0.8
SDF4-207ENST00000494748 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
SDF4-207ENST00000494748 HECTD1Q9ULT8 2610 aa10.06□□□□□ -0.8
SDF4-207ENST00000494748 PRYO14603 147 aa10.06□□□□□ -0.8
SDF4-207ENST00000494748 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
SDF4-207ENST00000494748 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
SDF4-207ENST00000494748 Q6ZRP5 223 aa10.05□□□□□ -0.8
SDF4-207ENST00000494748 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
SDF4-207ENST00000494748 APOC4P55056 127 aa10.04□□□□□ -0.8
SDF4-207ENST00000494748 PKD1L1Q8TDX9 2849 aa10.04□□□□□ -0.8
SDF4-207ENST00000494748 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
SDF4-207ENST00000494748 Q8N377 158 aa10.04□□□□□ -0.8
SDF4-207ENST00000494748 C3orf84H3BNL1 204 aa10.03□□□□□ -0.8
SDF4-207ENST00000494748 IGLV5-48A0A075B6I7 105 aa10.03□□□□□ -0.8
SDF4-207ENST00000494748 TEP1Q99973 2627 aaKnown RBP10.02□□□□□ -0.8
SDF4-207ENST00000494748 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.81
SDF4-207ENST00000494748 LCE6AA0A183 80 aa10.01□□□□□ -0.81
SDF4-207ENST00000494748 KCNQ1DNQ9H478 68 aa10.01□□□□□ -0.81
SDF4-207ENST00000494748 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
SDF4-207ENST00000494748 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
SDF4-207ENST00000494748 KPRPQ5T749 579 aaPredicted RBP9.98□□□□□ -0.81
SDF4-207ENST00000494748 DNAH1Q9P2D7 4330 aa9.98□□□□□ -0.81
SDF4-207ENST00000494748 TNP2Q05952 138 aa9.98□□□□□ -0.81
SDF4-207ENST00000494748 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.814e-7■■■□□ 16.9
SDF4-207ENST00000494748 SMIM29Q86T20 159 aa9.97□□□□□ -0.81
SDF4-207ENST00000494748 ANK2Q01484 3957 aa9.97□□□□□ -0.81
SDF4-207ENST00000494748 SMR3AQ99954 134 aa9.97□□□□□ -0.81
SDF4-207ENST00000494748 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.81
SDF4-207ENST00000494748 KRTAP4-16G5E9R7 235 aaPredicted RBP9.96□□□□□ -0.81
SDF4-207ENST00000494748 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
SDF4-207ENST00000494748 ESRGQ1W209 222 aa9.95□□□□□ -0.82
SDF4-207ENST00000494748 Q9BRP9 147 aa9.95□□□□□ -0.82
SDF4-207ENST00000494748 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
SDF4-207ENST00000494748 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
SDF4-207ENST00000494748 BRK1Q8WUW1 75 aa9.93□□□□□ -0.82
SDF4-207ENST00000494748 ZCCHC13Q8WW36 166 aaKnown RBP9.93□□□□□ -0.82
SDF4-207ENST00000494748 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
SDF4-207ENST00000494748 NBEAL1Q6ZS30 2694 aa9.92□□□□□ -0.82
SDF4-207ENST00000494748 BAHCC1Q9P281 2608 aa9.92□□□□□ -0.82
SDF4-207ENST00000494748 H3BNG1 76 aa9.91□□□□□ -0.82
SDF4-207ENST00000494748 DSCR10P59022 87 aa9.91□□□□□ -0.82
SDF4-207ENST00000494748 Q6ZRX8 168 aa9.91□□□□□ -0.82
SDF4-207ENST00000494748 hDV103S1A0JD37 113 aa9.91□□□□□ -0.82
SDF4-207ENST00000494748 A0A1B0GW54 56 aa9.9□□□□□ -0.82
SDF4-207ENST00000494748 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.82
SDF4-207ENST00000494748 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 SPRR1AP35321 89 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 SEC61GP60059 68 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
SDF4-207ENST00000494748 F8WDY8 70 aa9.88□□□□□ -0.83
SDF4-207ENST00000494748 Q8NBF4 154 aa9.88□□□□□ -0.83
SDF4-207ENST00000494748 NKAPP1Q8N9T2 125 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 C1orf137Q5JT78 98 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 NOTCH1P46531 2555 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 DHRS4-AS1Q9P1J3 65 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 V9GYY9 64 aa9.87□□□□□ -0.83
SDF4-207ENST00000494748 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 IGLV1-50A0A075B6I6 118 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 K7EQZ3 153 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 RETNQ9HD89 108 aa9.86□□□□□ -0.83
SDF4-207ENST00000494748 KMT2BQ9UMN6 2715 aaPredicted RBP9.85□□□□□ -0.83
SDF4-207ENST00000494748 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
SDF4-207ENST00000494748 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
SDF4-207ENST00000494748 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
SDF4-207ENST00000494748 CMYA5Q8N3K9 4069 aa9.84□□□□□ -0.83
SDF4-207ENST00000494748 IGKV2D-24A0A075B6R9 120 aa9.84□□□□□ -0.83
SDF4-207ENST00000494748 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
SDF4-207ENST00000494748 HELZ2Q9BYK8 2649 aaKnown RBP9.83□□□□□ -0.84
SDF4-207ENST00000494748 PRR4Q16378 134 aa9.83□□□□□ -0.84
SDF4-207ENST00000494748 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
SDF4-207ENST00000494748 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
SDF4-207ENST00000494748 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
SDF4-207ENST00000494748 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
SDF4-207ENST00000494748 Q1T7F1 81 aa9.81□□□□□ -0.84
SDF4-207ENST00000494748 J3QKU1 62 aa9.8□□□□□ -0.84
SDF4-207ENST00000494748 MGAM2Q2M2H8 2515 aa9.79□□□□□ -0.84
SDF4-207ENST00000494748 COL6A5A8TX70 2615 aa9.79□□□□□ -0.84
SDF4-207ENST00000494748 CASC10Q5T4H9 136 aa9.78□□□□□ -0.84
SDF4-207ENST00000494748 CYP4F30PQ9H0H9 118 aa9.77□□□□□ -0.85
SDF4-207ENST00000494748 A0A0G2JQZ4 141 aa9.77□□□□□ -0.85
SDF4-207ENST00000494748 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
SDF4-207ENST00000494748 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
SDF4-207ENST00000494748 MAST4O15021 2626 aa9.76□□□□□ -0.85
SDF4-207ENST00000494748 HCG22E2RYF7 251 aa9.75□□□□□ -0.85
SDF4-207ENST00000494748 DNAH10OSP0CZ25 163 aa9.75□□□□□ -0.85
SDF4-207ENST00000494748 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
SDF4-207ENST00000494748 PSCAO43653 123 aa9.73□□□□□ -0.85
SDF4-207ENST00000494748 KRTAP10-11P60412 298 aa9.73□□□□□ -0.85
SDF4-207ENST00000494748 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
SDF4-207ENST00000494748 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
SDF4-207ENST00000494748 INAFM1C9JVW0 142 aa9.72□□□□□ -0.85
SDF4-207ENST00000494748 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
SDF4-207ENST00000494748 DNAH10Q8IVF4 4471 aa9.71□□□□□ -0.86
SDF4-207ENST00000494748 TRAV22A0A0B4J277 110 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms